RNA–Protein interactions for RNA: ENST00000355771.7

ARHGEF4-202, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF4, Length 1,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-202ENST00000355771 NISCHQ9Y2I1 1504 aa40.21■■■■■ 4.03
ARHGEF4-202ENST00000355771 SHROOM4Q9ULL8 1493 aa34.4■■■■□ 3.1
ARHGEF4-202ENST00000355771 ZCCHC6Q5VYS8 1495 aaKnown RBP34.19■■■■□ 3.06
ARHGEF4-202ENST00000355771 SUPT5HO00267 1087 aaKnown RBP34.14■■■■□ 3.06
ARHGEF4-202ENST00000355771 CCDC180Q9P1Z9 1646 aa34.13■■■■□ 3.05
ARHGEF4-202ENST00000355771 HRCP23327 699 aa34.05■■■■□ 3.04
ARHGEF4-202ENST00000355771 CHIC1Q5VXU3 224 aa33.69■■■□□ 2.98
ARHGEF4-202ENST00000355771 MYO15BQ96JP2 1530 aa33.66■■■□□ 2.98
ARHGEF4-202ENST00000355771 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
ARHGEF4-202ENST00000355771 PCGF6Q9BYE7 350 aa33.31■■■□□ 2.92
ARHGEF4-202ENST00000355771 PPARGC1BQ86YN6 1023 aaKnown RBP32.81■■■□□ 2.84
ARHGEF4-202ENST00000355771 TRIM26Q12899 539 aaPredicted RBP32.79■■■□□ 2.84
ARHGEF4-202ENST00000355771 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
ARHGEF4-202ENST00000355771 ZEB1P37275 1124 aaPredicted RBP32.67■■■□□ 2.82
ARHGEF4-202ENST00000355771 ABCC9O60706 1549 aa32.61■■■□□ 2.81
ARHGEF4-202ENST00000355771 PELP1Q8IZL8 1130 aaKnown RBP32.61■■■□□ 2.81
ARHGEF4-202ENST00000355771 LOC105371045A0A1W2PR82 267 aa32.49■■■□□ 2.79
ARHGEF4-202ENST00000355771 RSF1Q96T23 1441 aaPredicted RBP31.99■■■□□ 2.71
ARHGEF4-202ENST00000355771 RB1CC1Q8TDY2 1594 aa31.98■■■□□ 2.71
ARHGEF4-202ENST00000355771 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
ARHGEF4-202ENST00000355771 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
ARHGEF4-202ENST00000355771 NACADO15069 1562 aa31.71■■■□□ 2.67
ARHGEF4-202ENST00000355771 SCAF1Q9H7N4 1312 aaKnown RBP31.68■■■□□ 2.66
ARHGEF4-202ENST00000355771 FAM9AQ8IZU1 332 aaPredicted RBP31.44■■■□□ 2.62
ARHGEF4-202ENST00000355771 MYT1Q01538 1121 aa31.4■■■□□ 2.62
ARHGEF4-202ENST00000355771 ACIN1Q9UKV3 1341 aaKnown RBP31.32■■■□□ 2.6
ARHGEF4-202ENST00000355771 CENPBP07199 599 aaPredicted RBP31.25■■■□□ 2.59
ARHGEF4-202ENST00000355771 CCER1Q8TC90 406 aaPredicted RBP31.21■■■□□ 2.59
ARHGEF4-202ENST00000355771 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
ARHGEF4-202ENST00000355771 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
ARHGEF4-202ENST00000355771 WRNQ14191 1432 aaPredicted RBP eCLIP31.1■■■□□ 2.57
ARHGEF4-202ENST00000355771 EIF4G1Q04637 1599 aaKnown RBP31.1■■■□□ 2.57
ARHGEF4-202ENST00000355771 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
ARHGEF4-202ENST00000355771 WIZO95785 1651 aa31.07■■■□□ 2.56
ARHGEF4-202ENST00000355771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.02■■■□□ 2.56
ARHGEF4-202ENST00000355771 DIEXFQ68CQ4 756 aaKnown RBP31.02■■■□□ 2.56
ARHGEF4-202ENST00000355771 NEUROD1Q13562 356 aa31■■■□□ 2.55
ARHGEF4-202ENST00000355771 EHMT2Q96KQ7 1210 aa30.95■■■□□ 2.55
ARHGEF4-202ENST00000355771 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
ARHGEF4-202ENST00000355771 GTF3C3Q9Y5Q9 886 aa30.85■■■□□ 2.53
ARHGEF4-202ENST00000355771 EEA1Q15075 1411 aa30.82■■■□□ 2.52
ARHGEF4-202ENST00000355771 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
ARHGEF4-202ENST00000355771 CEP162Q5TB80 1403 aa30.77■■■□□ 2.52
ARHGEF4-202ENST00000355771 TNIKQ9UKE5 1360 aa30.76■■■□□ 2.51
ARHGEF4-202ENST00000355771 ZNF316A6NFI3 1004 aaPredicted RBP30.67■■■□□ 2.5
ARHGEF4-202ENST00000355771 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
ARHGEF4-202ENST00000355771 BICRAQ9NZM4 1560 aa30.61■■■□□ 2.49
ARHGEF4-202ENST00000355771 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
ARHGEF4-202ENST00000355771 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
ARHGEF4-202ENST00000355771 SMARCA2P51531 1590 aa30.53■■■□□ 2.48
ARHGEF4-202ENST00000355771 SMARCA4P51532 1647 aa30.51■■■□□ 2.48
ARHGEF4-202ENST00000355771 GOLGA3Q08378 1498 aa30.49■■■□□ 2.47
ARHGEF4-202ENST00000355771 CSRNP3Q8WYN3 585 aa30.41■■■□□ 2.46
ARHGEF4-202ENST00000355771 SOGA1O94964 1423 aa30.37■■■□□ 2.45
ARHGEF4-202ENST00000355771 UBTFP17480 764 aaKnown RBP30.29■■■□□ 2.44
ARHGEF4-202ENST00000355771 KIF21BO75037 1637 aa30.29■■■□□ 2.44
ARHGEF4-202ENST00000355771 CLSPNQ9HAW4 1339 aa30.28■■■□□ 2.44
ARHGEF4-202ENST00000355771 CEP164Q9UPV0 1460 aa30.26■■■□□ 2.43
ARHGEF4-202ENST00000355771 TTBK1Q5TCY1 1321 aaPredicted RBP30.24■■■□□ 2.43
ARHGEF4-202ENST00000355771 BAZ1BQ9UIG0 1483 aaKnown RBP30.14■■■□□ 2.41
ARHGEF4-202ENST00000355771 YTHDC1Q96MU7 727 aaKnown RBP30.12■■■□□ 2.41
ARHGEF4-202ENST00000355771 MIER1Q8N108 512 aa30.11■■■□□ 2.41
ARHGEF4-202ENST00000355771 RUSC2Q8N2Y8 1516 aa30.11■■■□□ 2.41
ARHGEF4-202ENST00000355771 VPS8Q8N3P4 1428 aa30.09■■■□□ 2.41
ARHGEF4-202ENST00000355771 CLIP1P30622 1438 aa30.06■■■□□ 2.4
ARHGEF4-202ENST00000355771 APLP2Q06481 763 aa30.01■■■□□ 2.39
ARHGEF4-202ENST00000355771 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
ARHGEF4-202ENST00000355771 HNRNPUL2Q1KMD3 747 aaKnown RBP29.95■■■□□ 2.39
ARHGEF4-202ENST00000355771 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
ARHGEF4-202ENST00000355771 ERICH3Q5RHP9 1530 aa29.69■■■□□ 2.34
ARHGEF4-202ENST00000355771 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
ARHGEF4-202ENST00000355771 DHX57Q6P158 1386 aaKnown RBP29.67■■■□□ 2.34
ARHGEF4-202ENST00000355771 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
ARHGEF4-202ENST00000355771 SUPT16HQ9Y5B9 1047 aaKnown RBP29.59■■■□□ 2.33
ARHGEF4-202ENST00000355771 CUX2O14529 1486 aa29.55■■■□□ 2.32
ARHGEF4-202ENST00000355771 BIVM-ERCC5R4GMW8 1640 aa29.55■■■□□ 2.32
ARHGEF4-202ENST00000355771 RRBP1Q9P2E9 1410 aaKnown RBP29.51■■■□□ 2.32
ARHGEF4-202ENST00000355771 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
ARHGEF4-202ENST00000355771 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
ARHGEF4-202ENST00000355771 ARAP1Q96P48 1450 aa29.45■■■□□ 2.3
ARHGEF4-202ENST00000355771 PRXQ9BXM0 1461 aa29.43■■■□□ 2.3
ARHGEF4-202ENST00000355771 DNAJC5BQ9UF47 199 aa29.32■■■□□ 2.28
ARHGEF4-202ENST00000355771 TSHZ2Q9NRE2 1034 aa29.29■■■□□ 2.28
ARHGEF4-202ENST00000355771 CCNB3Q8WWL7 1395 aa29.28■■■□□ 2.28
ARHGEF4-202ENST00000355771 ANP32EQ9BTT0 268 aa29.28■■■□□ 2.28
ARHGEF4-202ENST00000355771 NCAPD3P42695 1498 aa29.27■■■□□ 2.28
ARHGEF4-202ENST00000355771 MAP3K1Q13233 1512 aa29.2■■■□□ 2.26
ARHGEF4-202ENST00000355771 RANGAP1P46060 587 aaPredicted RBP29.19■■■□□ 2.26
ARHGEF4-202ENST00000355771 KIF27Q86VH2 1401 aa29.19■■■□□ 2.26
ARHGEF4-202ENST00000355771 KANK4Q5T7N3 995 aaPredicted RBP29.17■■■□□ 2.26
ARHGEF4-202ENST00000355771 HMGXB3Q12766 1538 aa29.16■■■□□ 2.26
ARHGEF4-202ENST00000355771 TIMELESSQ9UNS1 1208 aa29.07■■■□□ 2.24
ARHGEF4-202ENST00000355771 MAPKBP1O60336 1514 aa29.07■■■□□ 2.24
ARHGEF4-202ENST00000355771 ARHGAP35Q9NRY4 1499 aa29.06■■■□□ 2.24
ARHGEF4-202ENST00000355771 RAB3GAP2Q9H2M9 1393 aa29.04■■■□□ 2.24
ARHGEF4-202ENST00000355771 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
ARHGEF4-202ENST00000355771 NEFLP07196 543 aa29.02■■■□□ 2.24
ARHGEF4-202ENST00000355771 CUX1P39880 1505 aa29.01■■■□□ 2.23
ARHGEF4-202ENST00000355771 SETD5Q9C0A6 1442 aa29■■■□□ 2.23
ARHGEF4-202ENST00000355771 CCER2I3L3R5 266 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms