RNA–Protein interactions for RNA: ENST00000622235.4

SCARF2-202, Transcript of scavenger receptor class F member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF2, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF2-202ENST00000622235 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
SCARF2-202ENST00000622235 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.03
SCARF2-202ENST00000622235 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
SCARF2-202ENST00000622235 SUPT5HO00267 1087 aaKnown RBP33.32■■■□□ 2.93
SCARF2-202ENST00000622235 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
SCARF2-202ENST00000622235 ZCCHC6Q5VYS8 1495 aaKnown RBP32.97■■■□□ 2.87
SCARF2-202ENST00000622235 HRCP23327 699 aa32.36■■■□□ 2.77
SCARF2-202ENST00000622235 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.72
SCARF2-202ENST00000622235 CHIC1Q5VXU3 224 aa31.95■■■□□ 2.7
SCARF2-202ENST00000622235 PCGF6Q9BYE7 350 aa31.77■■■□□ 2.68
SCARF2-202ENST00000622235 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
SCARF2-202ENST00000622235 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
SCARF2-202ENST00000622235 PELP1Q8IZL8 1130 aaKnown RBP31.59■■■□□ 2.65
SCARF2-202ENST00000622235 SCRIBQ14160 1630 aa31.44■■■□□ 2.62
SCARF2-202ENST00000622235 ABCC9O60706 1549 aa31.43■■■□□ 2.62
SCARF2-202ENST00000622235 LOC105371045A0A1W2PR82 267 aa31.27■■■□□ 2.6
SCARF2-202ENST00000622235 RSF1Q96T23 1441 aaPredicted RBP31.02■■■□□ 2.56
SCARF2-202ENST00000622235 SCAF1Q9H7N4 1312 aaKnown RBP31.02■■■□□ 2.56
SCARF2-202ENST00000622235 EHMT2Q96KQ7 1210 aa30.94■■■□□ 2.54
SCARF2-202ENST00000622235 FAM9AQ8IZU1 332 aaPredicted RBP30.93■■■□□ 2.54
SCARF2-202ENST00000622235 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
SCARF2-202ENST00000622235 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
SCARF2-202ENST00000622235 NACADO15069 1562 aa30.71■■■□□ 2.51
SCARF2-202ENST00000622235 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
SCARF2-202ENST00000622235 MROH2BQ7Z745 1585 aa30.53■■■□□ 2.48
SCARF2-202ENST00000622235 MYT1Q01538 1121 aa30.35■■■□□ 2.45
SCARF2-202ENST00000622235 WIZO95785 1651 aa30.33■■■□□ 2.45
SCARF2-202ENST00000622235 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
SCARF2-202ENST00000622235 PABPN1Q86U42 306 aaKnown RBP eCLIP30.27■■■□□ 2.44
SCARF2-202ENST00000622235 NEUROD1Q13562 356 aa30.04■■■□□ 2.4
SCARF2-202ENST00000622235 ZEB1P37275 1124 aaPredicted RBP30.03■■■□□ 2.4
SCARF2-202ENST00000622235 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
SCARF2-202ENST00000622235 ACIN1Q9UKV3 1341 aaKnown RBP29.99■■■□□ 2.39
SCARF2-202ENST00000622235 GTF3C3Q9Y5Q9 886 aa29.94■■■□□ 2.38
SCARF2-202ENST00000622235 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
SCARF2-202ENST00000622235 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
SCARF2-202ENST00000622235 CCDC88BA6NC98 1476 aa29.77■■■□□ 2.36
SCARF2-202ENST00000622235 ABCC8Q09428 1581 aa29.76■■■□□ 2.36
SCARF2-202ENST00000622235 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
SCARF2-202ENST00000622235 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
SCARF2-202ENST00000622235 SMARCA2P51531 1590 aa29.58■■■□□ 2.33
SCARF2-202ENST00000622235 UBTFP17480 764 aaKnown RBP29.55■■■□□ 2.32
SCARF2-202ENST00000622235 SOGA1O94964 1423 aa29.5■■■□□ 2.31
SCARF2-202ENST00000622235 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
SCARF2-202ENST00000622235 CENPBP07199 599 aaPredicted RBP29.49■■■□□ 2.31
SCARF2-202ENST00000622235 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
SCARF2-202ENST00000622235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.38■■■□□ 2.29
SCARF2-202ENST00000622235 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
SCARF2-202ENST00000622235 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
SCARF2-202ENST00000622235 RANGAP1P46060 587 aaPredicted RBP29.35■■■□□ 2.29
SCARF2-202ENST00000622235 DIEXFQ68CQ4 756 aaKnown RBP29.32■■■□□ 2.28
SCARF2-202ENST00000622235 CCER1Q8TC90 406 aaPredicted RBP29.28■■■□□ 2.28
SCARF2-202ENST00000622235 CEP162Q5TB80 1403 aa29.24■■■□□ 2.27
SCARF2-202ENST00000622235 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
SCARF2-202ENST00000622235 YTHDC1Q96MU7 727 aaKnown RBP29.22■■■□□ 2.27
SCARF2-202ENST00000622235 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
SCARF2-202ENST00000622235 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
SCARF2-202ENST00000622235 TNIKQ9UKE5 1360 aa29.09■■■□□ 2.25
SCARF2-202ENST00000622235 EEA1Q15075 1411 aa29.01■■■□□ 2.23
SCARF2-202ENST00000622235 GOLGA3Q08378 1498 aa28.97■■■□□ 2.23
SCARF2-202ENST00000622235 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
SCARF2-202ENST00000622235 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.23
SCARF2-202ENST00000622235 HNRNPUL2Q1KMD3 747 aaKnown RBP28.87■■■□□ 2.21
SCARF2-202ENST00000622235 BCL11AQ9H165 835 aa28.85■■■□□ 2.21
SCARF2-202ENST00000622235 APLP2Q06481 763 aa28.84■■■□□ 2.21
SCARF2-202ENST00000622235 CEP164Q9UPV0 1460 aa28.79■■■□□ 2.2
SCARF2-202ENST00000622235 CLIP1P30622 1438 aa28.78■■■□□ 2.2
SCARF2-202ENST00000622235 RAPGEF2Q9Y4G8 1499 aa28.73■■■□□ 2.19
SCARF2-202ENST00000622235 MIER1Q8N108 512 aa28.6■■■□□ 2.17
SCARF2-202ENST00000622235 ZNF316A6NFI3 1004 aaPredicted RBP28.54■■■□□ 2.16
SCARF2-202ENST00000622235 KIF21BO75037 1637 aa28.53■■■□□ 2.16
SCARF2-202ENST00000622235 NCAPD3P42695 1498 aa28.51■■■□□ 2.15
SCARF2-202ENST00000622235 VPS8Q8N3P4 1428 aa28.49■■■□□ 2.15
SCARF2-202ENST00000622235 ANP32EQ9BTT0 268 aa28.48■■■□□ 2.15
SCARF2-202ENST00000622235 TOP2BQ02880 1626 aa28.48■■■□□ 2.15
SCARF2-202ENST00000622235 CUX1P39880 1505 aa28.38■■■□□ 2.13
SCARF2-202ENST00000622235 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
SCARF2-202ENST00000622235 KIF27Q86VH2 1401 aa28.34■■■□□ 2.13
SCARF2-202ENST00000622235 ITGAEP38570 1179 aa28.31■■■□□ 2.12
SCARF2-202ENST00000622235 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
SCARF2-202ENST00000622235 CFTRP13569 1480 aa28.29■■■□□ 2.12
SCARF2-202ENST00000622235 TSHZ2Q9NRE2 1034 aa28.28■■■□□ 2.12
SCARF2-202ENST00000622235 SUPT16HQ9Y5B9 1047 aaKnown RBP28.27■■■□□ 2.12
SCARF2-202ENST00000622235 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
SCARF2-202ENST00000622235 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
SCARF2-202ENST00000622235 ATP1B4Q9UN42 357 aaPredicted RBP28.23■■■□□ 2.11
SCARF2-202ENST00000622235 CUX2O14529 1486 aa28.2■■■□□ 2.1
SCARF2-202ENST00000622235 P3H3Q8IVL6 736 aa28.19■■■□□ 2.1
SCARF2-202ENST00000622235 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
SCARF2-202ENST00000622235 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
SCARF2-202ENST00000622235 ERICH3Q5RHP9 1530 aa28.11■■■□□ 2.09
SCARF2-202ENST00000622235 IGF1RP08069 1367 aa28.04■■■□□ 2.08
SCARF2-202ENST00000622235 CARMIL1Q5VZK9 1371 aa28.01■■■□□ 2.07
SCARF2-202ENST00000622235 FGD5Q6ZNL6 1462 aa28■■■□□ 2.07
SCARF2-202ENST00000622235 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
SCARF2-202ENST00000622235 ARHGAP35Q9NRY4 1499 aa27.97■■■□□ 2.07
SCARF2-202ENST00000622235 PRKCSHP14314 528 aaPredicted RBP27.95■■■□□ 2.06
SCARF2-202ENST00000622235 BCANQ96GW7 911 aa27.95■■■□□ 2.06
SCARF2-202ENST00000622235 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
SCARF2-202ENST00000622235 NESP48681 1621 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms