RNA–Protein interactions for RNA: ENST00000623368.3

FDFT1-226, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-226ENST00000623368 NISCHQ9Y2I1 1504 aa39.17■■■■□ 3.86
FDFT1-226ENST00000623368 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
FDFT1-226ENST00000623368 ZCCHC6Q5VYS8 1495 aaKnown RBP33.13■■■□□ 2.89
FDFT1-226ENST00000623368 SHROOM4Q9ULL8 1493 aa32.88■■■□□ 2.85
FDFT1-226ENST00000623368 PELP1Q8IZL8 1130 aaKnown RBP32.47■■■□□ 2.79
FDFT1-226ENST00000623368 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
FDFT1-226ENST00000623368 HRCP23327 699 aa32.23■■■□□ 2.75
FDFT1-226ENST00000623368 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
FDFT1-226ENST00000623368 SUPT5HO00267 1087 aaKnown RBP32.05■■■□□ 2.72
FDFT1-226ENST00000623368 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
FDFT1-226ENST00000623368 CHIC1Q5VXU3 224 aa31.66■■■□□ 2.66
FDFT1-226ENST00000623368 MYT1Q01538 1121 aa31.54■■■□□ 2.64
FDFT1-226ENST00000623368 PCGF6Q9BYE7 350 aa31.51■■■□□ 2.63
FDFT1-226ENST00000623368 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
FDFT1-226ENST00000623368 PPARGC1BQ86YN6 1023 aaKnown RBP31.25■■■□□ 2.59
FDFT1-226ENST00000623368 ABCC9O60706 1549 aa31.24■■■□□ 2.59
FDFT1-226ENST00000623368 NACADO15069 1562 aa31.06■■■□□ 2.56
FDFT1-226ENST00000623368 SCAF1Q9H7N4 1312 aaKnown RBP30.83■■■□□ 2.53
FDFT1-226ENST00000623368 TRIM26Q12899 539 aaPredicted RBP30.82■■■□□ 2.52
FDFT1-226ENST00000623368 RSF1Q96T23 1441 aaPredicted RBP30.8■■■□□ 2.52
FDFT1-226ENST00000623368 LOC105371045A0A1W2PR82 267 aa30.67■■■□□ 2.5
FDFT1-226ENST00000623368 ZEB1P37275 1124 aaPredicted RBP30.63■■■□□ 2.49
FDFT1-226ENST00000623368 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
FDFT1-226ENST00000623368 CECR2Q9BXF3 1484 aa30.49■■■□□ 2.47
FDFT1-226ENST00000623368 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
FDFT1-226ENST00000623368 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
FDFT1-226ENST00000623368 WIZO95785 1651 aa30.27■■■□□ 2.44
FDFT1-226ENST00000623368 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
FDFT1-226ENST00000623368 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
FDFT1-226ENST00000623368 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
FDFT1-226ENST00000623368 TTBK1Q5TCY1 1321 aaPredicted RBP29.91■■■□□ 2.38
FDFT1-226ENST00000623368 ACIN1Q9UKV3 1341 aaKnown RBP29.88■■■□□ 2.37
FDFT1-226ENST00000623368 EIF4G1Q04637 1599 aaKnown RBP29.87■■■□□ 2.37
FDFT1-226ENST00000623368 TOP2AP11388 1531 aaKnown RBP29.83■■■□□ 2.37
FDFT1-226ENST00000623368 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
FDFT1-226ENST00000623368 NEUROD1Q13562 356 aa29.66■■■□□ 2.34
FDFT1-226ENST00000623368 SMARCA2P51531 1590 aa29.65■■■□□ 2.34
FDFT1-226ENST00000623368 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
FDFT1-226ENST00000623368 GTF3C3Q9Y5Q9 886 aa29.59■■■□□ 2.33
FDFT1-226ENST00000623368 FAM9AQ8IZU1 332 aaPredicted RBP29.57■■■□□ 2.32
FDFT1-226ENST00000623368 PABPN1Q86U42 306 aaKnown RBP eCLIP29.55■■■□□ 2.32
FDFT1-226ENST00000623368 PEG3Q9GZU2 1588 aa29.46■■■□□ 2.31
FDFT1-226ENST00000623368 CENPBP07199 599 aaPredicted RBP29.41■■■□□ 2.3
FDFT1-226ENST00000623368 ABCC8Q09428 1581 aa29.41■■■□□ 2.3
FDFT1-226ENST00000623368 CCER1Q8TC90 406 aaPredicted RBP29.34■■■□□ 2.29
FDFT1-226ENST00000623368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.3■■■□□ 2.28
FDFT1-226ENST00000623368 DIEXFQ68CQ4 756 aaKnown RBP29.27■■■□□ 2.28
FDFT1-226ENST00000623368 EHMT2Q96KQ7 1210 aa29.24■■■□□ 2.27
FDFT1-226ENST00000623368 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
FDFT1-226ENST00000623368 BCL11AQ9H165 835 aa29.15■■■□□ 2.26
FDFT1-226ENST00000623368 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
FDFT1-226ENST00000623368 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
FDFT1-226ENST00000623368 SOGA1O94964 1423 aa29■■■□□ 2.23
FDFT1-226ENST00000623368 EEA1Q15075 1411 aa28.91■■■□□ 2.22
FDFT1-226ENST00000623368 SYNJ1O43426 1573 aa28.9■■■□□ 2.22
FDFT1-226ENST00000623368 RUSC2Q8N2Y8 1516 aa28.9■■■□□ 2.22
FDFT1-226ENST00000623368 ZNF316A6NFI3 1004 aaPredicted RBP28.86■■■□□ 2.21
FDFT1-226ENST00000623368 CEP162Q5TB80 1403 aa28.79■■■□□ 2.2
FDFT1-226ENST00000623368 HMGXB3Q12766 1538 aa28.75■■■□□ 2.19
FDFT1-226ENST00000623368 TNIKQ9UKE5 1360 aa28.74■■■□□ 2.19
FDFT1-226ENST00000623368 CSRNP3Q8WYN3 585 aa28.74■■■□□ 2.19
FDFT1-226ENST00000623368 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
FDFT1-226ENST00000623368 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
FDFT1-226ENST00000623368 ANP32EQ9BTT0 268 aa28.67■■■□□ 2.18
FDFT1-226ENST00000623368 KIF21BO75037 1637 aa28.63■■■□□ 2.17
FDFT1-226ENST00000623368 PRKCSHP14314 528 aaPredicted RBP28.62■■■□□ 2.17
FDFT1-226ENST00000623368 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
FDFT1-226ENST00000623368 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
FDFT1-226ENST00000623368 CEP164Q9UPV0 1460 aa28.55■■■□□ 2.16
FDFT1-226ENST00000623368 YTHDC1Q96MU7 727 aaKnown RBP28.54■■■□□ 2.16
FDFT1-226ENST00000623368 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.15
FDFT1-226ENST00000623368 MIER1Q8N108 512 aa28.48■■■□□ 2.15
FDFT1-226ENST00000623368 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
FDFT1-226ENST00000623368 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
FDFT1-226ENST00000623368 CFTRP13569 1480 aa28.36■■■□□ 2.13
FDFT1-226ENST00000623368 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
FDFT1-226ENST00000623368 CUX1P39880 1505 aa28.35■■■□□ 2.13
FDFT1-226ENST00000623368 CLIP1P30622 1438 aa28.27■■■□□ 2.12
FDFT1-226ENST00000623368 ERICH3Q5RHP9 1530 aa28.2■■■□□ 2.1
FDFT1-226ENST00000623368 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
FDFT1-226ENST00000623368 HNRNPUL2Q1KMD3 747 aaKnown RBP28.16■■■□□ 2.1
FDFT1-226ENST00000623368 VPS8Q8N3P4 1428 aa28.15■■■□□ 2.1
FDFT1-226ENST00000623368 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
FDFT1-226ENST00000623368 ERICH6Q7L0X2 663 aa28.14■■■□□ 2.1
FDFT1-226ENST00000623368 TSHZ2Q9NRE2 1034 aa28.14■■■□□ 2.09
FDFT1-226ENST00000623368 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
FDFT1-226ENST00000623368 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
FDFT1-226ENST00000623368 SUPT16HQ9Y5B9 1047 aaKnown RBP28.03■■■□□ 2.08
FDFT1-226ENST00000623368 ARAP1Q96P48 1450 aa27.95■■■□□ 2.06
FDFT1-226ENST00000623368 APLP2Q06481 763 aa27.94■■■□□ 2.06
FDFT1-226ENST00000623368 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
FDFT1-226ENST00000623368 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
FDFT1-226ENST00000623368 CUX2O14529 1486 aa27.86■■■□□ 2.05
FDFT1-226ENST00000623368 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
FDFT1-226ENST00000623368 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
FDFT1-226ENST00000623368 IGF1RP08069 1367 aa27.75■■■□□ 2.03
FDFT1-226ENST00000623368 ARHGAP35Q9NRY4 1499 aa27.73■■■□□ 2.03
FDFT1-226ENST00000623368 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
FDFT1-226ENST00000623368 NESP48681 1621 aa27.67■■■□□ 2.02
FDFT1-226ENST00000623368 TOPBP1Q92547 1522 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms