RNA–Protein interactions for RNA: ENST00000380814.4

SLC46A3-202, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC46A3, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-202ENST00000380814 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
SLC46A3-202ENST00000380814 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
SLC46A3-202ENST00000380814 ZCCHC6Q5VYS8 1495 aaKnown RBP37.75■■■■□ 3.63
SLC46A3-202ENST00000380814 DCAF1Q9Y4B6 1507 aa37.03■■■■□ 3.52
SLC46A3-202ENST00000380814 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
SLC46A3-202ENST00000380814 DCAF8L2P0C7V8 631 aa36.74■■■■□ 3.47
SLC46A3-202ENST00000380814 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
SLC46A3-202ENST00000380814 ABCC9O60706 1549 aa36.1■■■■□ 3.37
SLC46A3-202ENST00000380814 NACADO15069 1562 aa35.96■■■■□ 3.35
SLC46A3-202ENST00000380814 SUPT5HO00267 1087 aaKnown RBP35.85■■■■□ 3.33
SLC46A3-202ENST00000380814 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
SLC46A3-202ENST00000380814 RB1CC1Q8TDY2 1594 aa35.5■■■■□ 3.27
SLC46A3-202ENST00000380814 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
SLC46A3-202ENST00000380814 UNC13AQ9UPW8 1703 aa34.88■■■■□ 3.17
SLC46A3-202ENST00000380814 CECR2Q9BXF3 1484 aa34.75■■■■□ 3.15
SLC46A3-202ENST00000380814 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
SLC46A3-202ENST00000380814 MROH2BQ7Z745 1585 aa34.63■■■■□ 3.13
SLC46A3-202ENST00000380814 BAZ1AQ9NRL2 1556 aaPredicted RBP34.53■■■■□ 3.12
SLC46A3-202ENST00000380814 BICRAQ9NZM4 1560 aa34.45■■■■□ 3.11
SLC46A3-202ENST00000380814 WIZO95785 1651 aa34.4■■■■□ 3.1
SLC46A3-202ENST00000380814 SMARCA4P51532 1647 aa34.31■■■■□ 3.08
SLC46A3-202ENST00000380814 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
SLC46A3-202ENST00000380814 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
SLC46A3-202ENST00000380814 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
SLC46A3-202ENST00000380814 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
SLC46A3-202ENST00000380814 EIF4G1Q04637 1599 aaKnown RBP33.74■■■□□ 2.99
SLC46A3-202ENST00000380814 CCDC88BA6NC98 1476 aa33.7■■■□□ 2.99
SLC46A3-202ENST00000380814 TRIM41Q8WV44 630 aa33.66■■■□□ 2.98
SLC46A3-202ENST00000380814 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
SLC46A3-202ENST00000380814 HRCP23327 699 aa33.44■■■□□ 2.94
SLC46A3-202ENST00000380814 BAZ1BQ9UIG0 1483 aaKnown RBP33.42■■■□□ 2.94
SLC46A3-202ENST00000380814 LOC105371045A0A1W2PR82 267 aa33.35■■■□□ 2.93
SLC46A3-202ENST00000380814 ABCC8Q09428 1581 aa33.2■■■□□ 2.91
SLC46A3-202ENST00000380814 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
SLC46A3-202ENST00000380814 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
SLC46A3-202ENST00000380814 FAM9AQ8IZU1 332 aaPredicted RBP33.06■■■□□ 2.88
SLC46A3-202ENST00000380814 WRNQ14191 1432 aaPredicted RBP eCLIP32.9■■■□□ 2.86
SLC46A3-202ENST00000380814 SYNJ1O43426 1573 aa32.76■■■□□ 2.84
SLC46A3-202ENST00000380814 EEA1Q15075 1411 aa32.76■■■□□ 2.83
SLC46A3-202ENST00000380814 CC2D2AQ9P2K1 1620 aa32.7■■■□□ 2.83
SLC46A3-202ENST00000380814 SOGA1O94964 1423 aa32.69■■■□□ 2.82
SLC46A3-202ENST00000380814 CFTRP13569 1480 aa32.62■■■□□ 2.81
SLC46A3-202ENST00000380814 TOP2BQ02880 1626 aa32.58■■■□□ 2.81
SLC46A3-202ENST00000380814 EHMT2Q96KQ7 1210 aa32.57■■■□□ 2.8
SLC46A3-202ENST00000380814 BIVM-ERCC5R4GMW8 1640 aa32.55■■■□□ 2.8
SLC46A3-202ENST00000380814 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
SLC46A3-202ENST00000380814 RUSC2Q8N2Y8 1516 aa32.54■■■□□ 2.8
SLC46A3-202ENST00000380814 PELP1Q8IZL8 1130 aaKnown RBP32.52■■■□□ 2.8
SLC46A3-202ENST00000380814 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
SLC46A3-202ENST00000380814 PCGF6Q9BYE7 350 aa32.49■■■□□ 2.79
SLC46A3-202ENST00000380814 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
SLC46A3-202ENST00000380814 TNIKQ9UKE5 1360 aa32.35■■■□□ 2.77
SLC46A3-202ENST00000380814 CUX1P39880 1505 aa32.34■■■□□ 2.77
SLC46A3-202ENST00000380814 GOLGA3Q08378 1498 aa32.34■■■□□ 2.77
SLC46A3-202ENST00000380814 KIF21BO75037 1637 aa32.32■■■□□ 2.76
SLC46A3-202ENST00000380814 TRIM26Q12899 539 aaPredicted RBP32.32■■■□□ 2.76
SLC46A3-202ENST00000380814 PPARGC1BQ86YN6 1023 aaKnown RBP32.32■■■□□ 2.76
SLC46A3-202ENST00000380814 CEP164Q9UPV0 1460 aa32.28■■■□□ 2.76
SLC46A3-202ENST00000380814 CEP162Q5TB80 1403 aa32.22■■■□□ 2.75
SLC46A3-202ENST00000380814 UBTFP17480 764 aaKnown RBP32.13■■■□□ 2.73
SLC46A3-202ENST00000380814 FANCD2Q9BXW9 1451 aa32.02■■■□□ 2.72
SLC46A3-202ENST00000380814 KIF27Q86VH2 1401 aa32.01■■■□□ 2.71
SLC46A3-202ENST00000380814 RAPGEF2Q9Y4G8 1499 aa32■■■□□ 2.71
SLC46A3-202ENST00000380814 ERICH3Q5RHP9 1530 aa31.98■■■□□ 2.71
SLC46A3-202ENST00000380814 PRXQ9BXM0 1461 aa31.96■■■□□ 2.71
SLC46A3-202ENST00000380814 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
SLC46A3-202ENST00000380814 NESP48681 1621 aa31.9■■■□□ 2.7
SLC46A3-202ENST00000380814 FGD5Q6ZNL6 1462 aa31.89■■■□□ 2.69
SLC46A3-202ENST00000380814 DNMBPQ6XZF7 1577 aa31.86■■■□□ 2.69
SLC46A3-202ENST00000380814 CLIP1P30622 1438 aa31.83■■■□□ 2.69
SLC46A3-202ENST00000380814 CUX2O14529 1486 aa31.79■■■□□ 2.68
SLC46A3-202ENST00000380814 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
SLC46A3-202ENST00000380814 ZEB1P37275 1124 aaPredicted RBP31.72■■■□□ 2.67
SLC46A3-202ENST00000380814 PDS5BQ9NTI5 1447 aa31.67■■■□□ 2.66
SLC46A3-202ENST00000380814 DNAJC5BQ9UF47 199 aa31.67■■■□□ 2.66
SLC46A3-202ENST00000380814 IGF1RP08069 1367 aa31.66■■■□□ 2.66
SLC46A3-202ENST00000380814 VPS8Q8N3P4 1428 aa31.65■■■□□ 2.66
SLC46A3-202ENST00000380814 POLA1P09884 1462 aaPredicted RBP31.64■■■□□ 2.66
SLC46A3-202ENST00000380814 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
SLC46A3-202ENST00000380814 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
SLC46A3-202ENST00000380814 KIF21AQ7Z4S6 1674 aa31.55■■■□□ 2.64
SLC46A3-202ENST00000380814 RAD54L2Q9Y4B4 1467 aa31.54■■■□□ 2.64
SLC46A3-202ENST00000380814 CARMIL1Q5VZK9 1371 aa31.51■■■□□ 2.64
SLC46A3-202ENST00000380814 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
SLC46A3-202ENST00000380814 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
SLC46A3-202ENST00000380814 SCAF1Q9H7N4 1312 aaKnown RBP31.44■■■□□ 2.62
SLC46A3-202ENST00000380814 RANGAP1P46060 587 aaPredicted RBP31.42■■■□□ 2.62
SLC46A3-202ENST00000380814 CUL7Q14999 1698 aa31.39■■■□□ 2.62
SLC46A3-202ENST00000380814 MYT1Q01538 1121 aa31.38■■■□□ 2.61
SLC46A3-202ENST00000380814 TTBK1Q5TCY1 1321 aaPredicted RBP31.34■■■□□ 2.61
SLC46A3-202ENST00000380814 ARHGAP35Q9NRY4 1499 aa31.34■■■□□ 2.61
SLC46A3-202ENST00000380814 ABCA5Q8WWZ7 1642 aa31.33■■■□□ 2.61
SLC46A3-202ENST00000380814 APLP2Q06481 763 aa31.31■■■□□ 2.6
SLC46A3-202ENST00000380814 TARBP1Q13395 1621 aaKnown RBP31.25■■■□□ 2.59
SLC46A3-202ENST00000380814 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
SLC46A3-202ENST00000380814 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
SLC46A3-202ENST00000380814 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
SLC46A3-202ENST00000380814 CTTNBP2Q8WZ74 1663 aa31.15■■■□□ 2.58
SLC46A3-202ENST00000380814 WDR62O43379 1518 aa31.07■■■□□ 2.56
SLC46A3-202ENST00000380814 EFCAB5A4FU69 1503 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms