RNA–Protein interactions for RNA: ENST00000371717.7

PMPCA-201, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCA, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-201ENST00000371717 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
PMPCA-201ENST00000371717 CCDC180Q9P1Z9 1646 aa37.12■■■■□ 3.53
PMPCA-201ENST00000371717 SHROOM4Q9ULL8 1493 aa36.41■■■■□ 3.42
PMPCA-201ENST00000371717 ZCCHC6Q5VYS8 1495 aaKnown RBP36.29■■■■□ 3.4
PMPCA-201ENST00000371717 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
PMPCA-201ENST00000371717 SUPT5HO00267 1087 aaKnown RBP35.92■■■■□ 3.34
PMPCA-201ENST00000371717 ABCC9O60706 1549 aa35.36■■■■□ 3.25
PMPCA-201ENST00000371717 DCAF1Q9Y4B6 1507 aa35.35■■■■□ 3.25
PMPCA-201ENST00000371717 CHIC1Q5VXU3 224 aa35.26■■■■□ 3.24
PMPCA-201ENST00000371717 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
PMPCA-201ENST00000371717 HRCP23327 699 aa34.85■■■■□ 3.17
PMPCA-201ENST00000371717 NACADO15069 1562 aa34.63■■■■□ 3.13
PMPCA-201ENST00000371717 SCRIBQ14160 1630 aa34.54■■■■□ 3.12
PMPCA-201ENST00000371717 PCGF6Q9BYE7 350 aa34.43■■■■□ 3.1
PMPCA-201ENST00000371717 RB1CC1Q8TDY2 1594 aa34.31■■■■□ 3.08
PMPCA-201ENST00000371717 LOC105371045A0A1W2PR82 267 aa34.08■■■■□ 3.05
PMPCA-201ENST00000371717 RSF1Q96T23 1441 aaPredicted RBP33.95■■■■□ 3.03
PMPCA-201ENST00000371717 TRIM26Q12899 539 aaPredicted RBP33.87■■■■□ 3.01
PMPCA-201ENST00000371717 PPARGC1BQ86YN6 1023 aaKnown RBP33.81■■■■□ 3
PMPCA-201ENST00000371717 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
PMPCA-201ENST00000371717 CECR2Q9BXF3 1484 aa33.6■■■□□ 2.97
PMPCA-201ENST00000371717 PABPN1Q86U42 306 aaKnown RBP eCLIP33.58■■■□□ 2.975e-10■■■■□ 23.2
PMPCA-201ENST00000371717 TRIM41Q8WV44 630 aa33.56■■■□□ 2.96
PMPCA-201ENST00000371717 ZEB1P37275 1124 aaPredicted RBP33.41■■■□□ 2.94
PMPCA-201ENST00000371717 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
PMPCA-201ENST00000371717 MROH2BQ7Z745 1585 aa33.36■■■□□ 2.93
PMPCA-201ENST00000371717 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
PMPCA-201ENST00000371717 FAM9AQ8IZU1 332 aaPredicted RBP33.11■■■□□ 2.89
PMPCA-201ENST00000371717 WIZO95785 1651 aa33.07■■■□□ 2.89
PMPCA-201ENST00000371717 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
PMPCA-201ENST00000371717 EIF4G1Q04637 1599 aaKnown RBP32.87■■■□□ 2.85
PMPCA-201ENST00000371717 EHMT2Q96KQ7 1210 aa32.67■■■□□ 2.82
PMPCA-201ENST00000371717 TOP2AP11388 1531 aaKnown RBP32.63■■■□□ 2.81
PMPCA-201ENST00000371717 WRNQ14191 1432 aaPredicted RBP eCLIP32.46■■■□□ 2.79
PMPCA-201ENST00000371717 ATAD2BQ9ULI0 1458 aa32.46■■■□□ 2.79
PMPCA-201ENST00000371717 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
PMPCA-201ENST00000371717 PEG3Q9GZU2 1588 aa32.43■■■□□ 2.78
PMPCA-201ENST00000371717 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
PMPCA-201ENST00000371717 ABCC8Q09428 1581 aa32.36■■■□□ 2.77
PMPCA-201ENST00000371717 EEA1Q15075 1411 aa32.3■■■□□ 2.76
PMPCA-201ENST00000371717 PELP1Q8IZL8 1130 aaKnown RBP32.29■■■□□ 2.76
PMPCA-201ENST00000371717 BAZ1BQ9UIG0 1483 aaKnown RBP32.28■■■□□ 2.76
PMPCA-201ENST00000371717 CCER1Q8TC90 406 aaPredicted RBP32.28■■■□□ 2.76
PMPCA-201ENST00000371717 TNIKQ9UKE5 1360 aa32.26■■■□□ 2.75
PMPCA-201ENST00000371717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.25■■■□□ 2.75
PMPCA-201ENST00000371717 CEP162Q5TB80 1403 aa32.25■■■□□ 2.75
PMPCA-201ENST00000371717 SCAF1Q9H7N4 1312 aaKnown RBP32.23■■■□□ 2.75
PMPCA-201ENST00000371717 SOGA1O94964 1423 aa32.15■■■□□ 2.74
PMPCA-201ENST00000371717 CSRNP3Q8WYN3 585 aa32.07■■■□□ 2.72
PMPCA-201ENST00000371717 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
PMPCA-201ENST00000371717 GOLGA3Q08378 1498 aa31.99■■■□□ 2.71
PMPCA-201ENST00000371717 RUSC2Q8N2Y8 1516 aa31.93■■■□□ 2.7
PMPCA-201ENST00000371717 HMGXB3Q12766 1538 aa31.93■■■□□ 2.7
PMPCA-201ENST00000371717 ACIN1Q9UKV3 1341 aaKnown RBP31.9■■■□□ 2.7
PMPCA-201ENST00000371717 DIEXFQ68CQ4 756 aaKnown RBP31.88■■■□□ 2.69
PMPCA-201ENST00000371717 UBTFP17480 764 aaKnown RBP31.88■■■□□ 2.69
PMPCA-201ENST00000371717 CC2D2AQ9P2K1 1620 aa31.84■■■□□ 2.69
PMPCA-201ENST00000371717 CEP164Q9UPV0 1460 aa31.79■■■□□ 2.68
PMPCA-201ENST00000371717 KIF21BO75037 1637 aa31.78■■■□□ 2.68
PMPCA-201ENST00000371717 TTBK1Q5TCY1 1321 aaPredicted RBP31.76■■■□□ 2.67
PMPCA-201ENST00000371717 CENPBP07199 599 aaPredicted RBP31.73■■■□□ 2.67
PMPCA-201ENST00000371717 NEUROD1Q13562 356 aa31.73■■■□□ 2.67
PMPCA-201ENST00000371717 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
PMPCA-201ENST00000371717 ZNF316A6NFI3 1004 aaPredicted RBP31.61■■■□□ 2.65
PMPCA-201ENST00000371717 CLIP1P30622 1438 aa31.58■■■□□ 2.65
PMPCA-201ENST00000371717 VPS8Q8N3P4 1428 aa31.54■■■□□ 2.64
PMPCA-201ENST00000371717 GTF3C3Q9Y5Q9 886 aa31.46■■■□□ 2.63
PMPCA-201ENST00000371717 CFTRP13569 1480 aa31.45■■■□□ 2.63
PMPCA-201ENST00000371717 RAPGEF2Q9Y4G8 1499 aa31.38■■■□□ 2.61
PMPCA-201ENST00000371717 DNAJC5BQ9UF47 199 aa31.38■■■□□ 2.61
PMPCA-201ENST00000371717 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
PMPCA-201ENST00000371717 CADPSQ9ULU8 1353 aa31.35■■■□□ 2.61
PMPCA-201ENST00000371717 APLP2Q06481 763 aa31.33■■■□□ 2.61
PMPCA-201ENST00000371717 HNRNPUL2Q1KMD3 747 aaKnown RBP31.33■■■□□ 2.61
PMPCA-201ENST00000371717 BIVM-ERCC5R4GMW8 1640 aa31.26■■■□□ 2.59
PMPCA-201ENST00000371717 ERICH3Q5RHP9 1530 aa31.23■■■□□ 2.59
PMPCA-201ENST00000371717 CLSPNQ9HAW4 1339 aa31.16■■■□□ 2.58
PMPCA-201ENST00000371717 PRXQ9BXM0 1461 aa31.15■■■□□ 2.58
PMPCA-201ENST00000371717 NESP48681 1621 aa31.14■■■□□ 2.58
PMPCA-201ENST00000371717 CUX1P39880 1505 aa31.14■■■□□ 2.57
PMPCA-201ENST00000371717 MIER1Q8N108 512 aa31.1■■■□□ 2.57
PMPCA-201ENST00000371717 ARAP1Q96P48 1450 aa31.04■■■□□ 2.56
PMPCA-201ENST00000371717 PRDM2Q13029 1718 aa31.02■■■□□ 2.56
PMPCA-201ENST00000371717 FANCD2Q9BXW9 1451 aa31.01■■■□□ 2.55
PMPCA-201ENST00000371717 YTHDC1Q96MU7 727 aaKnown RBP30.97■■■□□ 2.55
PMPCA-201ENST00000371717 DHX57Q6P158 1386 aaKnown RBP30.94■■■□□ 2.54
PMPCA-201ENST00000371717 RANGAP1P46060 587 aaPredicted RBP30.93■■■□□ 2.54
PMPCA-201ENST00000371717 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
PMPCA-201ENST00000371717 RRBP1Q9P2E9 1410 aaKnown RBP30.9■■■□□ 2.54
PMPCA-201ENST00000371717 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
PMPCA-201ENST00000371717 CUX2O14529 1486 aa30.83■■■□□ 2.53
PMPCA-201ENST00000371717 MYT1Q01538 1121 aa30.82■■■□□ 2.52
PMPCA-201ENST00000371717 KANK4Q5T7N3 995 aaPredicted RBP30.81■■■□□ 2.52
PMPCA-201ENST00000371717 FGD5Q6ZNL6 1462 aa30.77■■■□□ 2.52
PMPCA-201ENST00000371717 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
PMPCA-201ENST00000371717 ARHGAP35Q9NRY4 1499 aa30.71■■■□□ 2.51
PMPCA-201ENST00000371717 CCNB3Q8WWL7 1395 aa30.68■■■□□ 2.5
PMPCA-201ENST00000371717 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
PMPCA-201ENST00000371717 DNMBPQ6XZF7 1577 aa30.65■■■□□ 2.5
PMPCA-201ENST00000371717 URB2Q14146 1524 aaKnown RBP30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms