RNA–Protein interactions for RNA: ENST00000626899.1

NRXN1-226, Transcript of neurexin 1, humanhuman

TSL 2 BASIC

Gene NRXN1, Length 2,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-226ENST00000626899 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
NRXN1-226ENST00000626899 CCDC180Q9P1Z9 1646 aa36.02■■■■□ 3.36
NRXN1-226ENST00000626899 SHROOM4Q9ULL8 1493 aa35.65■■■■□ 3.3
NRXN1-226ENST00000626899 ZCCHC6Q5VYS8 1495 aaKnown RBP35.62■■■■□ 3.29
NRXN1-226ENST00000626899 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
NRXN1-226ENST00000626899 SUPT5HO00267 1087 aaKnown RBP34.8■■■■□ 3.16
NRXN1-226ENST00000626899 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
NRXN1-226ENST00000626899 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
NRXN1-226ENST00000626899 MYO15BQ96JP2 1530 aa33.71■■■□□ 2.99
NRXN1-226ENST00000626899 SCRIBQ14160 1630 aa33.67■■■□□ 2.98
NRXN1-226ENST00000626899 ABCC9O60706 1549 aa33.57■■■□□ 2.96
NRXN1-226ENST00000626899 NACADO15069 1562 aa33.32■■■□□ 2.92
NRXN1-226ENST00000626899 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
NRXN1-226ENST00000626899 HRCP23327 699 aa33.14■■■□□ 2.9
NRXN1-226ENST00000626899 CECR2Q9BXF3 1484 aa32.9■■■□□ 2.86
NRXN1-226ENST00000626899 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.85
NRXN1-226ENST00000626899 MROH2BQ7Z745 1585 aa32.77■■■□□ 2.84
NRXN1-226ENST00000626899 LOC105371045A0A1W2PR82 267 aa32.72■■■□□ 2.83
NRXN1-226ENST00000626899 PPARGC1BQ86YN6 1023 aaKnown RBP32.6■■■□□ 2.81
NRXN1-226ENST00000626899 WIZO95785 1651 aa32.6■■■□□ 2.81
NRXN1-226ENST00000626899 PCGF6Q9BYE7 350 aa32.53■■■□□ 2.8
NRXN1-226ENST00000626899 UNC13AQ9UPW8 1703 aa32.46■■■□□ 2.79
NRXN1-226ENST00000626899 TRIM41Q8WV44 630 aa32.43■■■□□ 2.78
NRXN1-226ENST00000626899 BAZ1AQ9NRL2 1556 aaPredicted RBP32.39■■■□□ 2.78
NRXN1-226ENST00000626899 SMARCA4P51532 1647 aa32.19■■■□□ 2.74
NRXN1-226ENST00000626899 FAM9AQ8IZU1 332 aaPredicted RBP32.16■■■□□ 2.74
NRXN1-226ENST00000626899 EIF4G1Q04637 1599 aaKnown RBP32.08■■■□□ 2.73
NRXN1-226ENST00000626899 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
NRXN1-226ENST00000626899 BICRAQ9NZM4 1560 aa32.01■■■□□ 2.71
NRXN1-226ENST00000626899 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
NRXN1-226ENST00000626899 CCDC88BA6NC98 1476 aa31.9■■■□□ 2.7
NRXN1-226ENST00000626899 SMARCA2P51531 1590 aa31.89■■■□□ 2.7
NRXN1-226ENST00000626899 EHMT2Q96KQ7 1210 aa31.87■■■□□ 2.69
NRXN1-226ENST00000626899 TRIM26Q12899 539 aaPredicted RBP31.81■■■□□ 2.68
NRXN1-226ENST00000626899 PELP1Q8IZL8 1130 aaKnown RBP31.81■■■□□ 2.68
NRXN1-226ENST00000626899 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
NRXN1-226ENST00000626899 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
NRXN1-226ENST00000626899 SCAF1Q9H7N4 1312 aaKnown RBP31.43■■■□□ 2.62
NRXN1-226ENST00000626899 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
NRXN1-226ENST00000626899 SOGA1O94964 1423 aa31.36■■■□□ 2.61
NRXN1-226ENST00000626899 BAZ1BQ9UIG0 1483 aaKnown RBP31.27■■■□□ 2.6
NRXN1-226ENST00000626899 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
NRXN1-226ENST00000626899 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
NRXN1-226ENST00000626899 EEA1Q15075 1411 aa31.12■■■□□ 2.57
NRXN1-226ENST00000626899 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
NRXN1-226ENST00000626899 CSRNP3Q8WYN3 585 aa31.1■■■□□ 2.57
NRXN1-226ENST00000626899 CEP162Q5TB80 1403 aa31.07■■■□□ 2.57
NRXN1-226ENST00000626899 ZEB1P37275 1124 aaPredicted RBP31.03■■■□□ 2.56
NRXN1-226ENST00000626899 TNIKQ9UKE5 1360 aa31.03■■■□□ 2.56
NRXN1-226ENST00000626899 UBTFP17480 764 aaKnown RBP30.92■■■□□ 2.54
NRXN1-226ENST00000626899 GOLGA3Q08378 1498 aa30.91■■■□□ 2.54
NRXN1-226ENST00000626899 NCAPD3P42695 1498 aa30.83■■■□□ 2.53
NRXN1-226ENST00000626899 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
NRXN1-226ENST00000626899 KIF21BO75037 1637 aa30.78■■■□□ 2.52
NRXN1-226ENST00000626899 TTBK1Q5TCY1 1321 aaPredicted RBP30.78■■■□□ 2.52
NRXN1-226ENST00000626899 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
NRXN1-226ENST00000626899 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
NRXN1-226ENST00000626899 BIVM-ERCC5R4GMW8 1640 aa30.67■■■□□ 2.5
NRXN1-226ENST00000626899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.63■■■□□ 2.49
NRXN1-226ENST00000626899 RAPGEF2Q9Y4G8 1499 aa30.62■■■□□ 2.49
NRXN1-226ENST00000626899 ACIN1Q9UKV3 1341 aaKnown RBP30.59■■■□□ 2.49
NRXN1-226ENST00000626899 NEUROD1Q13562 356 aa30.57■■■□□ 2.49
NRXN1-226ENST00000626899 CLIP1P30622 1438 aa30.55■■■□□ 2.48
NRXN1-226ENST00000626899 CUX1P39880 1505 aa30.52■■■□□ 2.48
NRXN1-226ENST00000626899 CFTRP13569 1480 aa30.51■■■□□ 2.47
NRXN1-226ENST00000626899 MYT1Q01538 1121 aa30.49■■■□□ 2.47
NRXN1-226ENST00000626899 CCER1Q8TC90 406 aaPredicted RBP30.48■■■□□ 2.47
NRXN1-226ENST00000626899 VPS8Q8N3P4 1428 aa30.39■■■□□ 2.46
NRXN1-226ENST00000626899 GTF3C3Q9Y5Q9 886 aa30.39■■■□□ 2.46
NRXN1-226ENST00000626899 RANGAP1P46060 587 aaPredicted RBP30.37■■■□□ 2.45
NRXN1-226ENST00000626899 PRXQ9BXM0 1461 aa30.36■■■□□ 2.45
NRXN1-226ENST00000626899 PRDM2Q13029 1718 aa30.34■■■□□ 2.45
NRXN1-226ENST00000626899 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.45
NRXN1-226ENST00000626899 KIF27Q86VH2 1401 aa30.25■■■□□ 2.43
NRXN1-226ENST00000626899 CC2D2AQ9P2K1 1620 aa30.23■■■□□ 2.43
NRXN1-226ENST00000626899 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.42
NRXN1-226ENST00000626899 ARAP1Q96P48 1450 aa30.13■■■□□ 2.41
NRXN1-226ENST00000626899 APLP2Q06481 763 aa30.12■■■□□ 2.41
NRXN1-226ENST00000626899 CENPBP07199 599 aaPredicted RBP30.1■■■□□ 2.41
NRXN1-226ENST00000626899 HNRNPUL2Q1KMD3 747 aaKnown RBP30.08■■■□□ 2.41
NRXN1-226ENST00000626899 DIEXFQ68CQ4 756 aaKnown RBP30.07■■■□□ 2.41
NRXN1-226ENST00000626899 CUX2O14529 1486 aa30.04■■■□□ 2.4
NRXN1-226ENST00000626899 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
NRXN1-226ENST00000626899 IGF1RP08069 1367 aa29.97■■■□□ 2.39
NRXN1-226ENST00000626899 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
NRXN1-226ENST00000626899 ARHGAP35Q9NRY4 1499 aa29.92■■■□□ 2.38
NRXN1-226ENST00000626899 KANK4Q5T7N3 995 aaPredicted RBP29.89■■■□□ 2.38
NRXN1-226ENST00000626899 NESP48681 1621 aa29.83■■■□□ 2.37
NRXN1-226ENST00000626899 CARMIL1Q5VZK9 1371 aa29.82■■■□□ 2.36
NRXN1-226ENST00000626899 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
NRXN1-226ENST00000626899 RAD54L2Q9Y4B4 1467 aa29.73■■■□□ 2.35
NRXN1-226ENST00000626899 TOPBP1Q92547 1522 aa29.72■■■□□ 2.35
NRXN1-226ENST00000626899 POLA1P09884 1462 aaPredicted RBP29.69■■■□□ 2.34
NRXN1-226ENST00000626899 YTHDC1Q96MU7 727 aaKnown RBP29.65■■■□□ 2.34
NRXN1-226ENST00000626899 RRBP1Q9P2E9 1410 aaKnown RBP29.65■■■□□ 2.34
NRXN1-226ENST00000626899 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
NRXN1-226ENST00000626899 ZNF316A6NFI3 1004 aaPredicted RBP29.6■■■□□ 2.33
NRXN1-226ENST00000626899 LAMC3Q9Y6N6 1575 aa29.57■■■□□ 2.32
NRXN1-226ENST00000626899 TIAM1Q13009 1591 aa29.55■■■□□ 2.32
NRXN1-226ENST00000626899 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms