Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
SMOQ99835 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMOQ99835 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.7■■□□□ 1.22
SMOQ99835 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.7■■□□□ 1.22
SMOQ99835 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMOQ99835 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.69■■□□□ 1.22
SMOQ99835 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
SMOQ99835 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 KRT18P61-201ENST00000585825 1298 ntBASIC22.69■■□□□ 1.22
SMOQ99835 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SMOQ99835 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.69■■□□□ 1.22
SMOQ99835 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SMOQ99835 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.69■■□□□ 1.22
SMOQ99835 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMOQ99835 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMOQ99835 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMOQ99835 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
SMOQ99835 AC055733.4-201ENST00000638462 1354 ntBASIC22.68■■□□□ 1.22
SMOQ99835 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMOQ99835 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.68■■□□□ 1.22
SMOQ99835 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
SMOQ99835 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.68■■□□□ 1.22
SMOQ99835 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMOQ99835 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.68■■□□□ 1.22
SMOQ99835 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.68■■□□□ 1.22
SMOQ99835 AC233723.2-201ENST00000623798 2106 ntBASIC22.68■■□□□ 1.22
SMOQ99835 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SMOQ99835 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMOQ99835 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.68■■□□□ 1.22
SMOQ99835 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMOQ99835 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SMOQ99835 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SMOQ99835 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.67■■□□□ 1.22
SMOQ99835 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.67■■□□□ 1.22
SMOQ99835 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.67■■□□□ 1.22
SMOQ99835 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.67■■□□□ 1.22
SMOQ99835 NTF6G-201ENST00000591094 616 ntBASIC22.67■■□□□ 1.22
SMOQ99835 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SMOQ99835 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.67■■□□□ 1.22
SMOQ99835 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SMOQ99835 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SMOQ99835 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMOQ99835 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SMOQ99835 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.66■■□□□ 1.22
SMOQ99835 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.66■■□□□ 1.22
SMOQ99835 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.66■■□□□ 1.22
SMOQ99835 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.66■■□□□ 1.22
SMOQ99835 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMOQ99835 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.66■■□□□ 1.22
SMOQ99835 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMOQ99835 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMOQ99835 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.66■■□□□ 1.22
SMOQ99835 AL034346.1-201ENST00000568244 1277 ntBASIC22.66■■□□□ 1.22
SMOQ99835 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
SMOQ99835 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMOQ99835 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.66■■□□□ 1.22
SMOQ99835 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.65■■□□□ 1.22
SMOQ99835 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SMOQ99835 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.65■■□□□ 1.22
SMOQ99835 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.65■■□□□ 1.22
SMOQ99835 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.65■■□□□ 1.22
SMOQ99835 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMOQ99835 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
SMOQ99835 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.65■■□□□ 1.22
SMOQ99835 AC133561.1-201ENST00000568600 2415 ntBASIC22.65■■□□□ 1.22
SMOQ99835 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMOQ99835 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMOQ99835 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SMOQ99835 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.64■■□□□ 1.21
SMOQ99835 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.64■■□□□ 1.21
SMOQ99835 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.64■■□□□ 1.21
SMOQ99835 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMOQ99835 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMOQ99835 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMOQ99835 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms