RNA–Protein interactions for RNA: ENST00000623711.3

RYK-209, Transcript of receptor-like tyrosine kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RYK, Length 2,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-209ENST00000623711 NISCHQ9Y2I1 1504 aa44.88■■■■■ 4.78
RYK-209ENST00000623711 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
RYK-209ENST00000623711 SUPT5HO00267 1087 aaKnown RBP39.01■■■■□ 3.84
RYK-209ENST00000623711 DCAF8L2P0C7V8 631 aa38.28■■■■□ 3.72
RYK-209ENST00000623711 ZCCHC6Q5VYS8 1495 aaKnown RBP37.96■■■■□ 3.67
RYK-209ENST00000623711 MYO15BQ96JP2 1530 aa37.79■■■■□ 3.64
RYK-209ENST00000623711 CHIC1Q5VXU3 224 aa37.71■■■■□ 3.63
RYK-209ENST00000623711 CCDC180Q9P1Z9 1646 aa37.46■■■■□ 3.59
RYK-209ENST00000623711 PCGF6Q9BYE7 350 aa37.3■■■■□ 3.56
RYK-209ENST00000623711 HRCP23327 699 aa37.15■■■■□ 3.54
RYK-209ENST00000623711 LOC105371045A0A1W2PR82 267 aa37.07■■■■□ 3.52
RYK-209ENST00000623711 PPARGC1BQ86YN6 1023 aaKnown RBP37■■■■□ 3.51
RYK-209ENST00000623711 EHMT2Q96KQ7 1210 aa36.34■■■■□ 3.41
RYK-209ENST00000623711 DCAF1Q9Y4B6 1507 aa36.27■■■■□ 3.4
RYK-209ENST00000623711 FAM9AQ8IZU1 332 aaPredicted RBP36.22■■■■□ 3.39
RYK-209ENST00000623711 SCRIBQ14160 1630 aa36■■■■□ 3.35
RYK-209ENST00000623711 TRIM26Q12899 539 aaPredicted RBP35.97■■■■□ 3.35
RYK-209ENST00000623711 TRIM41Q8WV44 630 aa35.93■■■■□ 3.34
RYK-209ENST00000623711 RSF1Q96T23 1441 aaPredicted RBP35.9■■■■□ 3.34
RYK-209ENST00000623711 ABCC9O60706 1549 aa35.85■■■■□ 3.33
RYK-209ENST00000623711 RB1CC1Q8TDY2 1594 aa35.67■■■■□ 3.3
RYK-209ENST00000623711 CECR2Q9BXF3 1484 aa35.45■■■■□ 3.27
RYK-209ENST00000623711 MROH2BQ7Z745 1585 aa35.2■■■■□ 3.22
RYK-209ENST00000623711 TTBK1Q5TCY1 1321 aaPredicted RBP35.17■■■■□ 3.22
RYK-209ENST00000623711 WIZO95785 1651 aa35.02■■■■□ 3.2
RYK-209ENST00000623711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35■■■■□ 3.19
RYK-209ENST00000623711 ZEB1P37275 1124 aaPredicted RBP35■■■■□ 3.19
RYK-209ENST00000623711 NACADO15069 1562 aa34.92■■■■□ 3.18
RYK-209ENST00000623711 SCAF1Q9H7N4 1312 aaKnown RBP34.76■■■■□ 3.16
RYK-209ENST00000623711 CCER1Q8TC90 406 aaPredicted RBP34.7■■■■□ 3.15
RYK-209ENST00000623711 ABCC8Q09428 1581 aa34.6■■■■□ 3.13
RYK-209ENST00000623711 CCDC88BA6NC98 1476 aa34.51■■■■□ 3.11
RYK-209ENST00000623711 BAZ1AQ9NRL2 1556 aaPredicted RBP34.43■■■■□ 3.1
RYK-209ENST00000623711 SOGA1O94964 1423 aa34.4■■■■□ 3.1
RYK-209ENST00000623711 EIF4G1Q04637 1599 aaKnown RBP34.33■■■■□ 3.09
RYK-209ENST00000623711 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
RYK-209ENST00000623711 UBTFP17480 764 aaKnown RBP34.3■■■■□ 3.08
RYK-209ENST00000623711 RUSC2Q8N2Y8 1516 aa34.29■■■■□ 3.08
RYK-209ENST00000623711 PELP1Q8IZL8 1130 aaKnown RBP34.25■■■■□ 3.07
RYK-209ENST00000623711 NEUROD1Q13562 356 aa34.24■■■■□ 3.07
RYK-209ENST00000623711 CEP162Q5TB80 1403 aa34.22■■■■□ 3.07
RYK-209ENST00000623711 DIEXFQ68CQ4 756 aaKnown RBP34.15■■■■□ 3.06
RYK-209ENST00000623711 RANGAP1P46060 587 aaPredicted RBP34.12■■■■□ 3.05
RYK-209ENST00000623711 TOP2AP11388 1531 aaKnown RBP34.1■■■■□ 3.05
RYK-209ENST00000623711 SMARCA2P51531 1590 aa34.08■■■■□ 3.05
RYK-209ENST00000623711 CSRNP3Q8WYN3 585 aa34.08■■■■□ 3.05
RYK-209ENST00000623711 SMARCA4P51532 1647 aa34.06■■■■□ 3.04
RYK-209ENST00000623711 ACIN1Q9UKV3 1341 aaKnown RBP34.04■■■■□ 3.04
RYK-209ENST00000623711 UNC13AQ9UPW8 1703 aa34.02■■■■□ 3.04
RYK-209ENST00000623711 HNRNPUL2Q1KMD3 747 aaKnown RBP33.98■■■■□ 3.03
RYK-209ENST00000623711 GTF3C3Q9Y5Q9 886 aa33.91■■■■□ 3.02
RYK-209ENST00000623711 TNIKQ9UKE5 1360 aa33.91■■■■□ 3.02
RYK-209ENST00000623711 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
RYK-209ENST00000623711 YTHDC1Q96MU7 727 aaKnown RBP33.86■■■■□ 3.01
RYK-209ENST00000623711 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
RYK-209ENST00000623711 ZNF316A6NFI3 1004 aaPredicted RBP33.63■■■□□ 2.97
RYK-209ENST00000623711 GOLGA3Q08378 1498 aa33.63■■■□□ 2.97
RYK-209ENST00000623711 CENPBP07199 599 aaPredicted RBP33.59■■■□□ 2.97
RYK-209ENST00000623711 SYNJ1O43426 1573 aa33.53■■■□□ 2.96
RYK-209ENST00000623711 MIER1Q8N108 512 aa33.52■■■□□ 2.96
RYK-209ENST00000623711 EEA1Q15075 1411 aa33.51■■■□□ 2.95
RYK-209ENST00000623711 CLIP1P30622 1438 aa33.48■■■□□ 2.95
RYK-209ENST00000623711 RAPGEF2Q9Y4G8 1499 aa33.41■■■□□ 2.94
RYK-209ENST00000623711 APLP2Q06481 763 aa33.37■■■□□ 2.93
RYK-209ENST00000623711 CEP164Q9UPV0 1460 aa33.35■■■□□ 2.93
RYK-209ENST00000623711 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
RYK-209ENST00000623711 VPS8Q8N3P4 1428 aa33.23■■■□□ 2.91
RYK-209ENST00000623711 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
RYK-209ENST00000623711 KANK4Q5T7N3 995 aaPredicted RBP33.16■■■□□ 2.9
RYK-209ENST00000623711 KIF21BO75037 1637 aa33.11■■■□□ 2.89
RYK-209ENST00000623711 ITGAEP38570 1179 aa33.08■■■□□ 2.89
RYK-209ENST00000623711 PEG3Q9GZU2 1588 aa33.05■■■□□ 2.88
RYK-209ENST00000623711 DHX57Q6P158 1386 aaKnown RBP32.86■■■□□ 2.85
RYK-209ENST00000623711 ARAP1Q96P48 1450 aa32.83■■■□□ 2.85
RYK-209ENST00000623711 TOP2BQ02880 1626 aa32.79■■■□□ 2.84
RYK-209ENST00000623711 PRXQ9BXM0 1461 aa32.71■■■□□ 2.83
RYK-209ENST00000623711 KCNH8Q96L42 1107 aa32.67■■■□□ 2.82
RYK-209ENST00000623711 CUX1P39880 1505 aa32.65■■■□□ 2.82
RYK-209ENST00000623711 MYT1Q01538 1121 aa32.61■■■□□ 2.81
RYK-209ENST00000623711 P3H3Q8IVL6 736 aa32.58■■■□□ 2.81
RYK-209ENST00000623711 ATP1B4Q9UN42 357 aaPredicted RBP32.54■■■□□ 2.8
RYK-209ENST00000623711 BIVM-ERCC5R4GMW8 1640 aa32.52■■■□□ 2.8
RYK-209ENST00000623711 KIF27Q86VH2 1401 aa32.52■■■□□ 2.8
RYK-209ENST00000623711 ARHGAP35Q9NRY4 1499 aa32.5■■■□□ 2.79
RYK-209ENST00000623711 CCNB3Q8WWL7 1395 aa32.49■■■□□ 2.79
RYK-209ENST00000623711 ERICH3Q5RHP9 1530 aa32.48■■■□□ 2.79
RYK-209ENST00000623711 HIRIP3Q9BW71 556 aaPredicted RBP32.46■■■□□ 2.79
RYK-209ENST00000623711 SIN3AQ96ST3 1273 aa32.44■■■□□ 2.78
RYK-209ENST00000623711 SUPT16HQ9Y5B9 1047 aaKnown RBP32.43■■■□□ 2.78
RYK-209ENST00000623711 RRBP1Q9P2E9 1410 aaKnown RBP32.42■■■□□ 2.78
RYK-209ENST00000623711 FAM50AQ14320 339 aaKnown RBP32.4■■■□□ 2.78
RYK-209ENST00000623711 CLSPNQ9HAW4 1339 aa32.39■■■□□ 2.77
RYK-209ENST00000623711 RAB3GAP2Q9H2M9 1393 aa32.38■■■□□ 2.77
RYK-209ENST00000623711 NCAPD3P42695 1498 aa32.37■■■□□ 2.77
RYK-209ENST00000623711 CUX2O14529 1486 aa32.34■■■□□ 2.77
RYK-209ENST00000623711 IGF1RP08069 1367 aa32.3■■■□□ 2.76
RYK-209ENST00000623711 BCANQ96GW7 911 aa32.29■■■□□ 2.76
RYK-209ENST00000623711 DDX10Q13206 875 aaKnown RBP32.28■■■□□ 2.76
RYK-209ENST00000623711 CFTRP13569 1480 aa32.26■■■□□ 2.75
RYK-209ENST00000623711 PHLDB1Q86UU1 1377 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms