RNA–Protein interactions for RNA: ENST00000491381.5

SNX21-212, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-212ENST00000491381 NISCHQ9Y2I1 1504 aa49.25■■■■■ 5.47
SNX21-212ENST00000491381 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
SNX21-212ENST00000491381 ZCCHC6Q5VYS8 1495 aaKnown RBP41.37■■■■■ 4.21
SNX21-212ENST00000491381 DCAF1Q9Y4B6 1507 aa40.84■■■■■ 4.13
SNX21-212ENST00000491381 ABCC9O60706 1549 aa40.61■■■■■ 4.09
SNX21-212ENST00000491381 DCAF8L2P0C7V8 631 aa40.48■■■■■ 4.07
SNX21-212ENST00000491381 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
SNX21-212ENST00000491381 NACADO15069 1562 aa40.12■■■■■ 4.01
SNX21-212ENST00000491381 SHROOM4Q9ULL8 1493 aa39.89■■■■□ 3.98
SNX21-212ENST00000491381 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.95
SNX21-212ENST00000491381 SCRIBQ14160 1630 aa39.41■■■■□ 3.9
SNX21-212ENST00000491381 UNC13AQ9UPW8 1703 aa38.86■■■■□ 3.81
SNX21-212ENST00000491381 BICRAQ9NZM4 1560 aa38.51■■■■□ 3.76
SNX21-212ENST00000491381 SUPT5HO00267 1087 aaKnown RBP38.36■■■■□ 3.73
SNX21-212ENST00000491381 PABPN1Q86U42 306 aaKnown RBP eCLIP38.23■■■■□ 3.71
SNX21-212ENST00000491381 CECR2Q9BXF3 1484 aa38.18■■■■□ 3.7
SNX21-212ENST00000491381 RSF1Q96T23 1441 aaPredicted RBP38.14■■■■□ 3.7
SNX21-212ENST00000491381 BAZ1AQ9NRL2 1556 aaPredicted RBP38.05■■■■□ 3.68
SNX21-212ENST00000491381 MROH2BQ7Z745 1585 aa37.98■■■■□ 3.67
SNX21-212ENST00000491381 SMARCA4P51532 1647 aa37.86■■■■□ 3.65
SNX21-212ENST00000491381 WIZO95785 1651 aa37.64■■■■□ 3.62
SNX21-212ENST00000491381 PEG3Q9GZU2 1588 aa37.49■■■■□ 3.59
SNX21-212ENST00000491381 EIF4G1Q04637 1599 aaKnown RBP37.37■■■■□ 3.57
SNX21-212ENST00000491381 TOP2AP11388 1531 aaKnown RBP37.34■■■■□ 3.57
SNX21-212ENST00000491381 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
SNX21-212ENST00000491381 ATAD2BQ9ULI0 1458 aa37.27■■■■□ 3.56
SNX21-212ENST00000491381 BAZ1BQ9UIG0 1483 aaKnown RBP37.04■■■■□ 3.52
SNX21-212ENST00000491381 NCAPD3P42695 1498 aa37.02■■■■□ 3.52
SNX21-212ENST00000491381 HMGXB3Q12766 1538 aa36.97■■■■□ 3.51
SNX21-212ENST00000491381 CCDC88BA6NC98 1476 aa36.91■■■■□ 3.5
SNX21-212ENST00000491381 CC2D2AQ9P2K1 1620 aa36.8■■■■□ 3.48
SNX21-212ENST00000491381 CHIC1Q5VXU3 224 aa36.77■■■■□ 3.48
SNX21-212ENST00000491381 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
SNX21-212ENST00000491381 CFTRP13569 1480 aa36.15■■■■□ 3.38
SNX21-212ENST00000491381 CADPSQ9ULU8 1353 aa36.03■■■■□ 3.36
SNX21-212ENST00000491381 ABCC8Q09428 1581 aa36.03■■■■□ 3.36
SNX21-212ENST00000491381 PRDM2Q13029 1718 aa35.96■■■■□ 3.35
SNX21-212ENST00000491381 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
SNX21-212ENST00000491381 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
SNX21-212ENST00000491381 LAMC3Q9Y6N6 1575 aa35.76■■■■□ 3.32
SNX21-212ENST00000491381 SYNJ1O43426 1573 aa35.72■■■■□ 3.31
SNX21-212ENST00000491381 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
SNX21-212ENST00000491381 BIVM-ERCC5R4GMW8 1640 aa35.62■■■■□ 3.29
SNX21-212ENST00000491381 NESP48681 1621 aa35.61■■■■□ 3.29
SNX21-212ENST00000491381 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
SNX21-212ENST00000491381 CUX1P39880 1505 aa35.54■■■■□ 3.28
SNX21-212ENST00000491381 PDS5BQ9NTI5 1447 aa35.47■■■■□ 3.27
SNX21-212ENST00000491381 EEA1Q15075 1411 aa35.45■■■■□ 3.26
SNX21-212ENST00000491381 CEP164Q9UPV0 1460 aa35.39■■■■□ 3.26
SNX21-212ENST00000491381 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
SNX21-212ENST00000491381 SOGA1O94964 1423 aa35.36■■■■□ 3.25
SNX21-212ENST00000491381 DNMBPQ6XZF7 1577 aa35.3■■■■□ 3.24
SNX21-212ENST00000491381 LOC105371045A0A1W2PR82 267 aa35.25■■■■□ 3.23
SNX21-212ENST00000491381 KIF21AQ7Z4S6 1674 aa35.22■■■■□ 3.23
SNX21-212ENST00000491381 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
SNX21-212ENST00000491381 RUSC2Q8N2Y8 1516 aa35.2■■■■□ 3.23
SNX21-212ENST00000491381 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
SNX21-212ENST00000491381 CSRNP3Q8WYN3 585 aa35.14■■■■□ 3.22
SNX21-212ENST00000491381 URB2Q14146 1524 aaKnown RBP35.13■■■■□ 3.22
SNX21-212ENST00000491381 KIF27Q86VH2 1401 aa35.03■■■■□ 3.2
SNX21-212ENST00000491381 POLA1P09884 1462 aaPredicted RBP35.02■■■■□ 3.2
SNX21-212ENST00000491381 MRC2Q9UBG0 1479 aa35.01■■■■□ 3.2
SNX21-212ENST00000491381 KIF21BO75037 1637 aa34.93■■■■□ 3.18
SNX21-212ENST00000491381 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
SNX21-212ENST00000491381 CUX2O14529 1486 aa34.91■■■■□ 3.18
SNX21-212ENST00000491381 ERCC6Q03468 1493 aa34.87■■■■□ 3.17
SNX21-212ENST00000491381 GOLGA3Q08378 1498 aa34.87■■■■□ 3.17
SNX21-212ENST00000491381 RAD54L2Q9Y4B4 1467 aa34.85■■■■□ 3.17
SNX21-212ENST00000491381 WDR62O43379 1518 aa34.85■■■■□ 3.17
SNX21-212ENST00000491381 PRXQ9BXM0 1461 aa34.79■■■■□ 3.16
SNX21-212ENST00000491381 WDR97A6NE52 1622 aa34.78■■■■□ 3.16
SNX21-212ENST00000491381 TNIKQ9UKE5 1360 aa34.76■■■■□ 3.16
SNX21-212ENST00000491381 EHMT2Q96KQ7 1210 aa34.76■■■■□ 3.15
SNX21-212ENST00000491381 ERICH3Q5RHP9 1530 aa34.74■■■■□ 3.15
SNX21-212ENST00000491381 THOC2Q8NI27 1593 aaKnown RBP34.72■■■■□ 3.15
SNX21-212ENST00000491381 IGF1RP08069 1367 aa34.71■■■■□ 3.15
SNX21-212ENST00000491381 TARBP1Q13395 1621 aaKnown RBP34.69■■■■□ 3.14
SNX21-212ENST00000491381 RAPGEF2Q9Y4G8 1499 aa34.66■■■■□ 3.14
SNX21-212ENST00000491381 UBTFP17480 764 aaKnown RBP34.62■■■■□ 3.13
SNX21-212ENST00000491381 ABCA5Q8WWZ7 1642 aa34.61■■■■□ 3.13
SNX21-212ENST00000491381 IFT140Q96RY7 1462 aa34.59■■■■□ 3.13
SNX21-212ENST00000491381 CARMIL1Q5VZK9 1371 aa34.53■■■■□ 3.12
SNX21-212ENST00000491381 GAPVD1Q14C86 1478 aa34.53■■■■□ 3.12
SNX21-212ENST00000491381 TDRD9Q8NDG6 1382 aaKnown RBP34.51■■■■□ 3.11
SNX21-212ENST00000491381 CEP162Q5TB80 1403 aa34.5■■■■□ 3.11
SNX21-212ENST00000491381 CUL7Q14999 1698 aa34.49■■■■□ 3.11
SNX21-212ENST00000491381 PBRM1Q86U86 1689 aa34.32■■■■□ 3.08
SNX21-212ENST00000491381 AQRO60306 1485 aaKnown RBP eCLIP34.31■■■■□ 3.08
SNX21-212ENST00000491381 GRIN2BQ13224 1484 aa34.3■■■■□ 3.08
SNX21-212ENST00000491381 ZNF608Q9ULD9 1512 aaPredicted RBP34.3■■■■□ 3.08
SNX21-212ENST00000491381 CLIP1P30622 1438 aa34.27■■■■□ 3.08
SNX21-212ENST00000491381 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
SNX21-212ENST00000491381 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
SNX21-212ENST00000491381 ADAMTS12P58397 1594 aa34.16■■■■□ 3.06
SNX21-212ENST00000491381 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
SNX21-212ENST00000491381 CTTNBP2Q8WZ74 1663 aa34.04■■■■□ 3.04
SNX21-212ENST00000491381 SNAPC4Q5SXM2 1469 aa34.03■■■■□ 3.04
SNX21-212ENST00000491381 VPS8Q8N3P4 1428 aa33.99■■■■□ 3.03
SNX21-212ENST00000491381 ARHGAP35Q9NRY4 1499 aa33.97■■■■□ 3.03
SNX21-212ENST00000491381 ARAP1Q96P48 1450 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms