RNA–Protein interactions for RNA: ENST00000638462.1

AC055733.4-201, humanhuman

BASIC

Gene AC055733.4, Length 1,354 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.4-201ENST00000638462 NISCHQ9Y2I1 1504 aa51.09■■■■■ 5.77
AC055733.4-201ENST00000638462 CCDC180Q9P1Z9 1646 aa45.11■■■■■ 4.81
AC055733.4-201ENST00000638462 ABCC9O60706 1549 aa43.62■■■■■ 4.57
AC055733.4-201ENST00000638462 ZCCHC6Q5VYS8 1495 aaKnown RBP42.69■■■■■ 4.42
AC055733.4-201ENST00000638462 DCAF8L2P0C7V8 631 aa42.39■■■■■ 4.38
AC055733.4-201ENST00000638462 NACADO15069 1562 aa42.31■■■■■ 4.36
AC055733.4-201ENST00000638462 DCAF1Q9Y4B6 1507 aa42.31■■■■■ 4.36
AC055733.4-201ENST00000638462 MYO15BQ96JP2 1530 aa42.28■■■■■ 4.36
AC055733.4-201ENST00000638462 RB1CC1Q8TDY2 1594 aa42.19■■■■■ 4.34
AC055733.4-201ENST00000638462 UNC13AQ9UPW8 1703 aa41.24■■■■■ 4.19
AC055733.4-201ENST00000638462 SCRIBQ14160 1630 aa41.21■■■■■ 4.19
AC055733.4-201ENST00000638462 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
AC055733.4-201ENST00000638462 PABPN1Q86U42 306 aaKnown RBP eCLIP40.88■■■■■ 4.14
AC055733.4-201ENST00000638462 SHROOM4Q9ULL8 1493 aa40.66■■■■■ 4.1
AC055733.4-201ENST00000638462 DNAJC5BQ9UF47 199 aa40.35■■■■■ 4.05
AC055733.4-201ENST00000638462 EIF4G1Q04637 1599 aaKnown RBP39.8■■■■□ 3.96
AC055733.4-201ENST00000638462 CECR2Q9BXF3 1484 aa39.76■■■■□ 3.96
AC055733.4-201ENST00000638462 BAZ1AQ9NRL2 1556 aaPredicted RBP39.53■■■■□ 3.92
AC055733.4-201ENST00000638462 SMARCA4P51532 1647 aa39.5■■■■□ 3.91
AC055733.4-201ENST00000638462 CC2D2AQ9P2K1 1620 aa39.48■■■■□ 3.91
AC055733.4-201ENST00000638462 MROH2BQ7Z745 1585 aa39.4■■■■□ 3.9
AC055733.4-201ENST00000638462 ATAD2BQ9ULI0 1458 aa39.17■■■■□ 3.86
AC055733.4-201ENST00000638462 RSF1Q96T23 1441 aaPredicted RBP39.17■■■■□ 3.86
AC055733.4-201ENST00000638462 PEG3Q9GZU2 1588 aa39.13■■■■□ 3.85
AC055733.4-201ENST00000638462 SMARCA2P51531 1590 aa39.11■■■■□ 3.85
AC055733.4-201ENST00000638462 NCAPD3P42695 1498 aa39.08■■■■□ 3.85
AC055733.4-201ENST00000638462 WIZO95785 1651 aa38.96■■■■□ 3.83
AC055733.4-201ENST00000638462 HMGXB3Q12766 1538 aa38.9■■■■□ 3.82
AC055733.4-201ENST00000638462 BAZ1BQ9UIG0 1483 aaKnown RBP38.83■■■■□ 3.81
AC055733.4-201ENST00000638462 TOP2AP11388 1531 aaKnown RBP38.59■■■■□ 3.77
AC055733.4-201ENST00000638462 SUPT5HO00267 1087 aaKnown RBP38.55■■■■□ 3.76
AC055733.4-201ENST00000638462 CCDC88BA6NC98 1476 aa38.16■■■■□ 3.7
AC055733.4-201ENST00000638462 CADPSQ9ULU8 1353 aa37.95■■■■□ 3.67
AC055733.4-201ENST00000638462 NESP48681 1621 aa37.95■■■■□ 3.67
AC055733.4-201ENST00000638462 LAMC3Q9Y6N6 1575 aa37.89■■■■□ 3.66
AC055733.4-201ENST00000638462 CFTRP13569 1480 aa37.86■■■■□ 3.65
AC055733.4-201ENST00000638462 PDS5BQ9NTI5 1447 aa37.63■■■■□ 3.61
AC055733.4-201ENST00000638462 PRDM2Q13029 1718 aa37.52■■■■□ 3.6
AC055733.4-201ENST00000638462 ERCC6Q03468 1493 aa37.51■■■■□ 3.6
AC055733.4-201ENST00000638462 FANCD2Q9BXW9 1451 aa37.5■■■■□ 3.59
AC055733.4-201ENST00000638462 KIF21AQ7Z4S6 1674 aa37.46■■■■□ 3.59
AC055733.4-201ENST00000638462 DNAJC5Q9H3Z4 198 aa37.38■■■■□ 3.57
AC055733.4-201ENST00000638462 CEP164Q9UPV0 1460 aa37.38■■■■□ 3.57
AC055733.4-201ENST00000638462 THOC2Q8NI27 1593 aaKnown RBP37.23■■■■□ 3.55
AC055733.4-201ENST00000638462 MRC2Q9UBG0 1479 aa37.22■■■■□ 3.55
AC055733.4-201ENST00000638462 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
AC055733.4-201ENST00000638462 WDR62O43379 1518 aa37.08■■■■□ 3.53
AC055733.4-201ENST00000638462 CUX2O14529 1486 aa36.98■■■■□ 3.51
AC055733.4-201ENST00000638462 TOPBP1Q92547 1522 aa36.97■■■■□ 3.51
AC055733.4-201ENST00000638462 ABCC8Q09428 1581 aa36.97■■■■□ 3.51
AC055733.4-201ENST00000638462 DNMBPQ6XZF7 1577 aa36.95■■■■□ 3.51
AC055733.4-201ENST00000638462 CUX1P39880 1505 aa36.92■■■■□ 3.5
AC055733.4-201ENST00000638462 WRNQ14191 1432 aaPredicted RBP eCLIP36.87■■■■□ 3.49
AC055733.4-201ENST00000638462 SYNJ1O43426 1573 aa36.75■■■■□ 3.47
AC055733.4-201ENST00000638462 TOP2BQ02880 1626 aa36.73■■■■□ 3.47
AC055733.4-201ENST00000638462 BIVM-ERCC5R4GMW8 1640 aa36.71■■■■□ 3.47
AC055733.4-201ENST00000638462 POLA1P09884 1462 aaPredicted RBP36.71■■■■□ 3.47
AC055733.4-201ENST00000638462 FGD5Q6ZNL6 1462 aa36.68■■■■□ 3.46
AC055733.4-201ENST00000638462 IFT140Q96RY7 1462 aa36.58■■■■□ 3.45
AC055733.4-201ENST00000638462 SOGA1O94964 1423 aa36.55■■■■□ 3.44
AC055733.4-201ENST00000638462 RAD54L2Q9Y4B4 1467 aa36.53■■■■□ 3.44
AC055733.4-201ENST00000638462 TARBP1Q13395 1621 aaKnown RBP36.53■■■■□ 3.44
AC055733.4-201ENST00000638462 ZNF608Q9ULD9 1512 aaPredicted RBP36.4■■■■□ 3.42
AC055733.4-201ENST00000638462 ABCA10Q8WWZ4 1543 aa36.38■■■■□ 3.41
AC055733.4-201ENST00000638462 TRIM41Q8WV44 630 aa36.37■■■■□ 3.41
AC055733.4-201ENST00000638462 CHIC1Q5VXU3 224 aa36.36■■■■□ 3.41
AC055733.4-201ENST00000638462 WDR97A6NE52 1622 aa36.34■■■■□ 3.41
AC055733.4-201ENST00000638462 TDRD9Q8NDG6 1382 aaKnown RBP36.29■■■■□ 3.4
AC055733.4-201ENST00000638462 AQRO60306 1485 aaKnown RBP eCLIP36.26■■■■□ 3.4
AC055733.4-201ENST00000638462 EIF4G3O43432 1585 aaKnown RBP36.23■■■■□ 3.39
AC055733.4-201ENST00000638462 ABCA5Q8WWZ7 1642 aa36.16■■■■□ 3.38
AC055733.4-201ENST00000638462 GAPVD1Q14C86 1478 aa36.13■■■■□ 3.37
AC055733.4-201ENST00000638462 GRIN2BQ13224 1484 aa36.05■■■■□ 3.36
AC055733.4-201ENST00000638462 KIF27Q86VH2 1401 aa36.05■■■■□ 3.36
AC055733.4-201ENST00000638462 PBRM1Q86U86 1689 aa35.97■■■■□ 3.35
AC055733.4-201ENST00000638462 RUSC2Q8N2Y8 1516 aa35.94■■■■□ 3.34
AC055733.4-201ENST00000638462 ERICH3Q5RHP9 1530 aa35.93■■■■□ 3.34
AC055733.4-201ENST00000638462 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
AC055733.4-201ENST00000638462 MAGI1Q96QZ7 1491 aaPredicted RBP35.89■■■■□ 3.34
AC055733.4-201ENST00000638462 IGF1RP08069 1367 aa35.89■■■■□ 3.34
AC055733.4-201ENST00000638462 ADAMTS12P58397 1594 aa35.76■■■■□ 3.32
AC055733.4-201ENST00000638462 FHAD1B1AJZ9 1412 aa35.74■■■■□ 3.31
AC055733.4-201ENST00000638462 SYNJ2O15056 1496 aa35.74■■■■□ 3.31
AC055733.4-201ENST00000638462 EEA1Q15075 1411 aa35.73■■■■□ 3.31
AC055733.4-201ENST00000638462 CUL7Q14999 1698 aa35.67■■■■□ 3.3
AC055733.4-201ENST00000638462 CHMP7Q8WUX9 453 aaPredicted RBP35.66■■■■□ 3.3
AC055733.4-201ENST00000638462 CARMIL1Q5VZK9 1371 aa35.66■■■■□ 3.3
AC055733.4-201ENST00000638462 FBLN2P98095 1184 aa35.65■■■■□ 3.3
AC055733.4-201ENST00000638462 CHD1O14646 1710 aa35.64■■■■□ 3.3
AC055733.4-201ENST00000638462 CSRNP3Q8WYN3 585 aa35.63■■■■□ 3.29
AC055733.4-201ENST00000638462 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
AC055733.4-201ENST00000638462 GRIN2AQ12879 1464 aa35.6■■■■□ 3.29
AC055733.4-201ENST00000638462 PRXQ9BXM0 1461 aa35.55■■■■□ 3.28
AC055733.4-201ENST00000638462 OSCARQ8IYS5 282 aa35.52■■■■□ 3.28
AC055733.4-201ENST00000638462 RAPGEF2Q9Y4G8 1499 aa35.49■■■■□ 3.27
AC055733.4-201ENST00000638462 NUP160Q12769 1436 aa35.44■■■■□ 3.26
AC055733.4-201ENST00000638462 CEP170Q5SW79 1584 aa35.39■■■■□ 3.26
AC055733.4-201ENST00000638462 CLASP1Q7Z460 1538 aa35.33■■■■□ 3.25
AC055733.4-201ENST00000638462 KIF21BO75037 1637 aa35.32■■■■□ 3.24
AC055733.4-201ENST00000638462 KIAA0586Q9BVV6 1533 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms