RNA–Protein interactions for RNA: ENST00000592647.1

TRAPPC6A-205, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 514 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-205ENST00000592647 NISCHQ9Y2I1 1504 aa50.72■■■■■ 5.71
TRAPPC6A-205ENST00000592647 ABCC9O60706 1549 aa45.79■■■■■ 4.92
TRAPPC6A-205ENST00000592647 CCDC180Q9P1Z9 1646 aa45.44■■■■■ 4.87
TRAPPC6A-205ENST00000592647 RB1CC1Q8TDY2 1594 aa43.45■■■■■ 4.55
TRAPPC6A-205ENST00000592647 DNAJC5BQ9UF47 199 aa43.2■■■■■ 4.51
TRAPPC6A-205ENST00000592647 NACADO15069 1562 aa43.07■■■■■ 4.48
TRAPPC6A-205ENST00000592647 DCAF8L2P0C7V8 631 aa42.78■■■■■ 4.44
TRAPPC6A-205ENST00000592647 PABPN1Q86U42 306 aaKnown RBP eCLIP42.57■■■■■ 4.41
TRAPPC6A-205ENST00000592647 MYO15BQ96JP2 1530 aa42.4■■■■■ 4.38
TRAPPC6A-205ENST00000592647 ZCCHC6Q5VYS8 1495 aaKnown RBP42.34■■■■■ 4.37
TRAPPC6A-205ENST00000592647 UNC13AQ9UPW8 1703 aa42.32■■■■■ 4.37
TRAPPC6A-205ENST00000592647 BICRAQ9NZM4 1560 aa42.15■■■■■ 4.34
TRAPPC6A-205ENST00000592647 DCAF1Q9Y4B6 1507 aa41.9■■■■■ 4.3
TRAPPC6A-205ENST00000592647 SHROOM4Q9ULL8 1493 aa41.65■■■■■ 4.26
TRAPPC6A-205ENST00000592647 SCRIBQ14160 1630 aa41.4■■■■■ 4.22
TRAPPC6A-205ENST00000592647 CC2D2AQ9P2K1 1620 aa41.32■■■■■ 4.2
TRAPPC6A-205ENST00000592647 CECR2Q9BXF3 1484 aa41.3■■■■■ 4.2
TRAPPC6A-205ENST00000592647 EIF4G1Q04637 1599 aaKnown RBP41.17■■■■■ 4.18
TRAPPC6A-205ENST00000592647 DNAJC5Q9H3Z4 198 aa39.95■■■■□ 3.99
TRAPPC6A-205ENST00000592647 NCAPD3P42695 1498 aa39.78■■■■□ 3.96
TRAPPC6A-205ENST00000592647 CUX2O14529 1486 aa39.63■■■■□ 3.94
TRAPPC6A-205ENST00000592647 ATAD2BQ9ULI0 1458 aa39.6■■■■□ 3.93
TRAPPC6A-205ENST00000592647 ERCC6Q03468 1493 aa39.59■■■■□ 3.93
TRAPPC6A-205ENST00000592647 SMARCA2P51531 1590 aa39.48■■■■□ 3.91
TRAPPC6A-205ENST00000592647 HMGXB3Q12766 1538 aa39.45■■■■□ 3.91
TRAPPC6A-205ENST00000592647 SMARCA4P51532 1647 aa39.45■■■■□ 3.91
TRAPPC6A-205ENST00000592647 BAZ1AQ9NRL2 1556 aaPredicted RBP39.25■■■■□ 3.87
TRAPPC6A-205ENST00000592647 BAZ1BQ9UIG0 1483 aaKnown RBP39.22■■■■□ 3.87
TRAPPC6A-205ENST00000592647 NESP48681 1621 aa39.22■■■■□ 3.87
TRAPPC6A-205ENST00000592647 MROH2BQ7Z745 1585 aa39.15■■■■□ 3.86
TRAPPC6A-205ENST00000592647 PEG3Q9GZU2 1588 aa39.09■■■■□ 3.85
TRAPPC6A-205ENST00000592647 LAMC3Q9Y6N6 1575 aa38.92■■■■□ 3.82
TRAPPC6A-205ENST00000592647 RSF1Q96T23 1441 aaPredicted RBP38.92■■■■□ 3.82
TRAPPC6A-205ENST00000592647 THOC2Q8NI27 1593 aaKnown RBP38.89■■■■□ 3.82
TRAPPC6A-205ENST00000592647 WIZO95785 1651 aa38.76■■■■□ 3.8
TRAPPC6A-205ENST00000592647 PDS5BQ9NTI5 1447 aa38.74■■■■□ 3.79
TRAPPC6A-205ENST00000592647 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
TRAPPC6A-205ENST00000592647 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
TRAPPC6A-205ENST00000592647 CADPSQ9ULU8 1353 aa38.56■■■■□ 3.76
TRAPPC6A-205ENST00000592647 MRC2Q9UBG0 1479 aa38.41■■■■□ 3.74
TRAPPC6A-205ENST00000592647 TOP2AP11388 1531 aaKnown RBP38.33■■■■□ 3.73
TRAPPC6A-205ENST00000592647 WDR62O43379 1518 aa38.32■■■■□ 3.72
TRAPPC6A-205ENST00000592647 CEP164Q9UPV0 1460 aa38.2■■■■□ 3.71
TRAPPC6A-205ENST00000592647 FANCD2Q9BXW9 1451 aa38.12■■■■□ 3.69
TRAPPC6A-205ENST00000592647 TRIM41Q8WV44 630 aa38.07■■■■□ 3.68
TRAPPC6A-205ENST00000592647 CFTRP13569 1480 aa38.04■■■■□ 3.68
TRAPPC6A-205ENST00000592647 CCDC88BA6NC98 1476 aa37.95■■■■□ 3.67
TRAPPC6A-205ENST00000592647 URB2Q14146 1524 aaKnown RBP37.81■■■■□ 3.64
TRAPPC6A-205ENST00000592647 OSCARQ8IYS5 282 aa37.76■■■■□ 3.64
TRAPPC6A-205ENST00000592647 PRDM2Q13029 1718 aa37.53■■■■□ 3.6
TRAPPC6A-205ENST00000592647 IFT140Q96RY7 1462 aa37.45■■■■□ 3.59
TRAPPC6A-205ENST00000592647 ZNF608Q9ULD9 1512 aaPredicted RBP37.39■■■■□ 3.58
TRAPPC6A-205ENST00000592647 TOPBP1Q92547 1522 aa37.35■■■■□ 3.57
TRAPPC6A-205ENST00000592647 ABCC8Q09428 1581 aa37.27■■■■□ 3.56
TRAPPC6A-205ENST00000592647 RIMBP3CA6NJZ7 1639 aa37.25■■■■□ 3.55
TRAPPC6A-205ENST00000592647 RIMBP3BA6NNM3 1639 aa37.25■■■■□ 3.55
TRAPPC6A-205ENST00000592647 RIMBP3Q9UFD9 1639 aa37.25■■■■□ 3.55
TRAPPC6A-205ENST00000592647 DNMBPQ6XZF7 1577 aa37.18■■■■□ 3.54
TRAPPC6A-205ENST00000592647 EIF4G3O43432 1585 aaKnown RBP37.17■■■■□ 3.54
TRAPPC6A-205ENST00000592647 ARHGEF11O15085 1522 aa37.14■■■■□ 3.54
TRAPPC6A-205ENST00000592647 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.528e-11■■■■■ 72.6
TRAPPC6A-205ENST00000592647 TARBP1Q13395 1621 aaKnown RBP37.01■■■■□ 3.52
TRAPPC6A-205ENST00000592647 POLA1P09884 1462 aaPredicted RBP36.95■■■■□ 3.51
TRAPPC6A-205ENST00000592647 CHD1O14646 1710 aa36.89■■■■□ 3.5
TRAPPC6A-205ENST00000592647 CYB5RLQ6IPT4 315 aa36.88■■■■□ 3.49
TRAPPC6A-205ENST00000592647 FBLN2P98095 1184 aa36.86■■■■□ 3.49
TRAPPC6A-205ENST00000592647 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
TRAPPC6A-205ENST00000592647 SOGA1O94964 1423 aa36.78■■■■□ 3.48
TRAPPC6A-205ENST00000592647 TDRD9Q8NDG6 1382 aaKnown RBP36.75■■■■□ 3.47
TRAPPC6A-205ENST00000592647 ARAP1Q96P48 1450 aa36.75■■■■□ 3.47
TRAPPC6A-205ENST00000592647 WRNQ14191 1432 aaPredicted RBP eCLIP36.68■■■■□ 3.46
TRAPPC6A-205ENST00000592647 CUX1P39880 1505 aa36.68■■■■□ 3.46
TRAPPC6A-205ENST00000592647 FGD5Q6ZNL6 1462 aa36.68■■■■□ 3.46
TRAPPC6A-205ENST00000592647 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
TRAPPC6A-205ENST00000592647 SNAPC4Q5SXM2 1469 aa36.65■■■■□ 3.46
TRAPPC6A-205ENST00000592647 TRHP20396 242 aaPredicted RBP36.6■■■■□ 3.45
TRAPPC6A-205ENST00000592647 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
TRAPPC6A-205ENST00000592647 CHMP7Q8WUX9 453 aaPredicted RBP36.55■■■■□ 3.44
TRAPPC6A-205ENST00000592647 SYNJ1O43426 1573 aa36.54■■■■□ 3.44
TRAPPC6A-205ENST00000592647 CLASP1Q7Z460 1538 aa36.53■■■■□ 3.44
TRAPPC6A-205ENST00000592647 GRIN2BQ13224 1484 aa36.51■■■■□ 3.44
TRAPPC6A-205ENST00000592647 TOP2BQ02880 1626 aa36.48■■■■□ 3.43
TRAPPC6A-205ENST00000592647 BIVM-ERCC5R4GMW8 1640 aa36.45■■■■□ 3.42
TRAPPC6A-205ENST00000592647 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
TRAPPC6A-205ENST00000592647 GAPVD1Q14C86 1478 aa36.33■■■■□ 3.41
TRAPPC6A-205ENST00000592647 CHIC1Q5VXU3 224 aa36.3■■■■□ 3.4
TRAPPC6A-205ENST00000592647 PBRM1Q86U86 1689 aa36.26■■■■□ 3.4
TRAPPC6A-205ENST00000592647 ABCA10Q8WWZ4 1543 aa36.25■■■■□ 3.39
TRAPPC6A-205ENST00000592647 ABCA5Q8WWZ7 1642 aa36.19■■■■□ 3.38
TRAPPC6A-205ENST00000592647 GRIN2AQ12879 1464 aa36.04■■■■□ 3.36
TRAPPC6A-205ENST00000592647 ADAMTS12P58397 1594 aa35.97■■■■□ 3.35
TRAPPC6A-205ENST00000592647 NUP160Q12769 1436 aa35.93■■■■□ 3.34
TRAPPC6A-205ENST00000592647 ERCC6L2Q5T890 1561 aa35.9■■■■□ 3.34
TRAPPC6A-205ENST00000592647 CEP170Q5SW79 1584 aa35.89■■■■□ 3.34
TRAPPC6A-205ENST00000592647 FHAD1B1AJZ9 1412 aa35.88■■■■□ 3.33
TRAPPC6A-205ENST00000592647 KIF27Q86VH2 1401 aa35.87■■■■□ 3.33
TRAPPC6A-205ENST00000592647 RUSC2Q8N2Y8 1516 aa35.8■■■■□ 3.32
TRAPPC6A-205ENST00000592647 AEBP2Q6ZN18 517 aaPredicted RBP35.79■■■■□ 3.32
TRAPPC6A-205ENST00000592647 ERICH3Q5RHP9 1530 aa35.78■■■■□ 3.32
TRAPPC6A-205ENST00000592647 SHROOM2Q13796 1616 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms