RNA–Protein interactions for RNA: ENST00000379162.8

PDK3-201, Transcript of pyruvate dehydrogenase kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDK3, Length 1,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK3-201ENST00000379162 NISCHQ9Y2I1 1504 aa49.26■■■■■ 5.48
PDK3-201ENST00000379162 CCDC180Q9P1Z9 1646 aa42.94■■■■■ 4.46
PDK3-201ENST00000379162 ZCCHC6Q5VYS8 1495 aaKnown RBP41.37■■■■■ 4.21
PDK3-201ENST00000379162 ABCC9O60706 1549 aa40.86■■■■■ 4.13
PDK3-201ENST00000379162 DCAF8L2P0C7V8 631 aa40.78■■■■■ 4.12
PDK3-201ENST00000379162 DCAF1Q9Y4B6 1507 aa40.63■■■■■ 4.09
PDK3-201ENST00000379162 SHROOM4Q9ULL8 1493 aa40.27■■■■■ 4.04
PDK3-201ENST00000379162 MYO15BQ96JP2 1530 aa40.16■■■■■ 4.02
PDK3-201ENST00000379162 NACADO15069 1562 aa40.01■■■■■ 4
PDK3-201ENST00000379162 RB1CC1Q8TDY2 1594 aa39.71■■■■□ 3.95
PDK3-201ENST00000379162 SCRIBQ14160 1630 aa39.63■■■■□ 3.93
PDK3-201ENST00000379162 UNC13AQ9UPW8 1703 aa39.04■■■■□ 3.84
PDK3-201ENST00000379162 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
PDK3-201ENST00000379162 SUPT5HO00267 1087 aaKnown RBP38.61■■■■□ 3.77
PDK3-201ENST00000379162 PABPN1Q86U42 306 aaKnown RBP eCLIP38.55■■■■□ 3.76
PDK3-201ENST00000379162 CECR2Q9BXF3 1484 aa38.4■■■■□ 3.74
PDK3-201ENST00000379162 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
PDK3-201ENST00000379162 MROH2BQ7Z745 1585 aa38.14■■■■□ 3.7
PDK3-201ENST00000379162 BAZ1AQ9NRL2 1556 aaPredicted RBP38■■■■□ 3.67
PDK3-201ENST00000379162 SMARCA4P51532 1647 aa37.91■■■■□ 3.66
PDK3-201ENST00000379162 WIZO95785 1651 aa37.83■■■■□ 3.65
PDK3-201ENST00000379162 EIF4G1Q04637 1599 aaKnown RBP37.44■■■■□ 3.58
PDK3-201ENST00000379162 PEG3Q9GZU2 1588 aa37.39■■■■□ 3.58
PDK3-201ENST00000379162 TOP2AP11388 1531 aaKnown RBP37.34■■■■□ 3.57
PDK3-201ENST00000379162 ATAD2BQ9ULI0 1458 aa37.32■■■■□ 3.56
PDK3-201ENST00000379162 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
PDK3-201ENST00000379162 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.53
PDK3-201ENST00000379162 CCDC88BA6NC98 1476 aa37.01■■■■□ 3.51
PDK3-201ENST00000379162 NCAPD3P42695 1498 aa36.95■■■■□ 3.51
PDK3-201ENST00000379162 CC2D2AQ9P2K1 1620 aa36.94■■■■□ 3.5
PDK3-201ENST00000379162 HMGXB3Q12766 1538 aa36.89■■■■□ 3.5
PDK3-201ENST00000379162 CHIC1Q5VXU3 224 aa36.87■■■■□ 3.49
PDK3-201ENST00000379162 ABCC8Q09428 1581 aa36.26■■■■□ 3.4
PDK3-201ENST00000379162 DNAJC5BQ9UF47 199 aa36.24■■■■□ 3.39
PDK3-201ENST00000379162 TRIM41Q8WV44 630 aa36.22■■■■□ 3.39
PDK3-201ENST00000379162 CFTRP13569 1480 aa36.13■■■■□ 3.37
PDK3-201ENST00000379162 CADPSQ9ULU8 1353 aa36.01■■■■□ 3.36
PDK3-201ENST00000379162 WRNQ14191 1432 aaPredicted RBP eCLIP35.92■■■■□ 3.34
PDK3-201ENST00000379162 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
PDK3-201ENST00000379162 NESP48681 1621 aa35.88■■■■□ 3.33
PDK3-201ENST00000379162 SYNJ1O43426 1573 aa35.87■■■■□ 3.33
PDK3-201ENST00000379162 LAMC3Q9Y6N6 1575 aa35.7■■■■□ 3.31
PDK3-201ENST00000379162 FAM9AQ8IZU1 332 aaPredicted RBP35.69■■■■□ 3.3
PDK3-201ENST00000379162 FANCD2Q9BXW9 1451 aa35.65■■■■□ 3.3
PDK3-201ENST00000379162 CUX1P39880 1505 aa35.65■■■■□ 3.3
PDK3-201ENST00000379162 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
PDK3-201ENST00000379162 BIVM-ERCC5R4GMW8 1640 aa35.62■■■■□ 3.29
PDK3-201ENST00000379162 LOC105371045A0A1W2PR82 267 aa35.55■■■■□ 3.28
PDK3-201ENST00000379162 SOGA1O94964 1423 aa35.54■■■■□ 3.28
PDK3-201ENST00000379162 RUSC2Q8N2Y8 1516 aa35.47■■■■□ 3.27
PDK3-201ENST00000379162 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
PDK3-201ENST00000379162 KIF21AQ7Z4S6 1674 aa35.41■■■■□ 3.26
PDK3-201ENST00000379162 PDS5BQ9NTI5 1447 aa35.41■■■■□ 3.26
PDK3-201ENST00000379162 DNMBPQ6XZF7 1577 aa35.29■■■■□ 3.24
PDK3-201ENST00000379162 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
PDK3-201ENST00000379162 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
PDK3-201ENST00000379162 EHMT2Q96KQ7 1210 aa35.27■■■■□ 3.24
PDK3-201ENST00000379162 FGD5Q6ZNL6 1462 aa35.26■■■■□ 3.23
PDK3-201ENST00000379162 EEA1Q15075 1411 aa35.23■■■■□ 3.23
PDK3-201ENST00000379162 CSRNP3Q8WYN3 585 aa35.15■■■■□ 3.22
PDK3-201ENST00000379162 POLA1P09884 1462 aaPredicted RBP35.1■■■■□ 3.21
PDK3-201ENST00000379162 RAD54L2Q9Y4B4 1467 aa35.04■■■■□ 3.2
PDK3-201ENST00000379162 MRC2Q9UBG0 1479 aa35.02■■■■□ 3.2
PDK3-201ENST00000379162 CUX2O14529 1486 aa35■■■■□ 3.19
PDK3-201ENST00000379162 KIF27Q86VH2 1401 aa34.99■■■■□ 3.19
PDK3-201ENST00000379162 ERCC6Q03468 1493 aa34.96■■■■□ 3.19
PDK3-201ENST00000379162 ABCA10Q8WWZ4 1543 aa34.89■■■■□ 3.18
PDK3-201ENST00000379162 KIF21BO75037 1637 aa34.88■■■■□ 3.17
PDK3-201ENST00000379162 WDR62O43379 1518 aa34.85■■■■□ 3.17
PDK3-201ENST00000379162 WDR97A6NE52 1622 aa34.84■■■■□ 3.17
PDK3-201ENST00000379162 GOLGA3Q08378 1498 aa34.83■■■■□ 3.17
PDK3-201ENST00000379162 THOC2Q8NI27 1593 aaKnown RBP34.83■■■■□ 3.17
PDK3-201ENST00000379162 RAPGEF2Q9Y4G8 1499 aa34.8■■■■□ 3.16
PDK3-201ENST00000379162 PRXQ9BXM0 1461 aa34.78■■■■□ 3.16
PDK3-201ENST00000379162 TARBP1Q13395 1621 aaKnown RBP34.76■■■■□ 3.16
PDK3-201ENST00000379162 IGF1RP08069 1367 aa34.75■■■■□ 3.15
PDK3-201ENST00000379162 UBTFP17480 764 aaKnown RBP34.7■■■■□ 3.15
PDK3-201ENST00000379162 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
PDK3-201ENST00000379162 TNIKQ9UKE5 1360 aa34.69■■■■□ 3.14
PDK3-201ENST00000379162 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
PDK3-201ENST00000379162 ERICH3Q5RHP9 1530 aa34.64■■■■□ 3.14
PDK3-201ENST00000379162 CEP162Q5TB80 1403 aa34.57■■■■□ 3.12
PDK3-201ENST00000379162 GAPVD1Q14C86 1478 aa34.56■■■■□ 3.12
PDK3-201ENST00000379162 CARMIL1Q5VZK9 1371 aa34.55■■■■□ 3.12
PDK3-201ENST00000379162 IFT140Q96RY7 1462 aa34.54■■■■□ 3.12
PDK3-201ENST00000379162 ZNF608Q9ULD9 1512 aaPredicted RBP34.51■■■■□ 3.11
PDK3-201ENST00000379162 AQRO60306 1485 aaKnown RBP eCLIP34.49■■■■□ 3.11
PDK3-201ENST00000379162 CUL7Q14999 1698 aa34.42■■■■□ 3.1
PDK3-201ENST00000379162 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
PDK3-201ENST00000379162 EIF4G3O43432 1585 aaKnown RBP34.34■■■■□ 3.09
PDK3-201ENST00000379162 RANGAP1P46060 587 aaPredicted RBP34.32■■■■□ 3.08
PDK3-201ENST00000379162 CLIP1P30622 1438 aa34.3■■■■□ 3.08
PDK3-201ENST00000379162 GRIN2BQ13224 1484 aa34.28■■■■□ 3.08
PDK3-201ENST00000379162 ADAMTS12P58397 1594 aa34.22■■■■□ 3.07
PDK3-201ENST00000379162 FHAD1B1AJZ9 1412 aa34.15■■■■□ 3.06
PDK3-201ENST00000379162 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
PDK3-201ENST00000379162 CTTNBP2Q8WZ74 1663 aa34.08■■■■□ 3.05
PDK3-201ENST00000379162 ARAP1Q96P48 1450 aa34.05■■■■□ 3.04
PDK3-201ENST00000379162 ARHGAP35Q9NRY4 1499 aa34.04■■■■□ 3.04
PDK3-201ENST00000379162 MAGI1Q96QZ7 1491 aaPredicted RBP33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms