RNA–Protein interactions for RNA: ENST00000394022.7

RALGPS1-207, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 2 BASIC

Gene RALGPS1, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-207ENST00000394022 NISCHQ9Y2I1 1504 aa48.45■■■■■ 5.35
RALGPS1-207ENST00000394022 CCDC180Q9P1Z9 1646 aa42.17■■■■■ 4.34
RALGPS1-207ENST00000394022 ZCCHC6Q5VYS8 1495 aaKnown RBP40.76■■■■■ 4.12
RALGPS1-207ENST00000394022 DCAF1Q9Y4B6 1507 aa40.07■■■■■ 4
RALGPS1-207ENST00000394022 DCAF8L2P0C7V8 631 aa39.93■■■■□ 3.98
RALGPS1-207ENST00000394022 SHROOM4Q9ULL8 1493 aa39.74■■■■□ 3.95
RALGPS1-207ENST00000394022 ABCC9O60706 1549 aa39.58■■■■□ 3.93
RALGPS1-207ENST00000394022 MYO15BQ96JP2 1530 aa39.48■■■■□ 3.91
RALGPS1-207ENST00000394022 NACADO15069 1562 aa39.18■■■■□ 3.86
RALGPS1-207ENST00000394022 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
RALGPS1-207ENST00000394022 RB1CC1Q8TDY2 1594 aa38.8■■■■□ 3.8
RALGPS1-207ENST00000394022 SUPT5HO00267 1087 aaKnown RBP38.37■■■■□ 3.73
RALGPS1-207ENST00000394022 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
RALGPS1-207ENST00000394022 RSF1Q96T23 1441 aaPredicted RBP37.68■■■■□ 3.62
RALGPS1-207ENST00000394022 CECR2Q9BXF3 1484 aa37.6■■■■□ 3.61
RALGPS1-207ENST00000394022 BICRAQ9NZM4 1560 aa37.58■■■■□ 3.61
RALGPS1-207ENST00000394022 MROH2BQ7Z745 1585 aa37.44■■■■□ 3.58
RALGPS1-207ENST00000394022 BAZ1AQ9NRL2 1556 aaPredicted RBP37.42■■■■□ 3.58
RALGPS1-207ENST00000394022 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
RALGPS1-207ENST00000394022 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
RALGPS1-207ENST00000394022 WIZO95785 1651 aa37.17■■■■□ 3.54
RALGPS1-207ENST00000394022 CHIC1Q5VXU3 224 aa36.85■■■■□ 3.49
RALGPS1-207ENST00000394022 TOP2AP11388 1531 aaKnown RBP36.81■■■■□ 3.48
RALGPS1-207ENST00000394022 PEG3Q9GZU2 1588 aa36.71■■■■□ 3.47
RALGPS1-207ENST00000394022 SMARCA2P51531 1590 aa36.53■■■■□ 3.44
RALGPS1-207ENST00000394022 ATAD2BQ9ULI0 1458 aa36.5■■■■□ 3.43
RALGPS1-207ENST00000394022 EIF4G1Q04637 1599 aaKnown RBP36.44■■■■□ 3.42
RALGPS1-207ENST00000394022 CCDC88BA6NC98 1476 aa36.4■■■■□ 3.42
RALGPS1-207ENST00000394022 BAZ1BQ9UIG0 1483 aaKnown RBP36.35■■■■□ 3.41
RALGPS1-207ENST00000394022 HMGXB3Q12766 1538 aa36.14■■■■□ 3.38
RALGPS1-207ENST00000394022 NCAPD3P42695 1498 aa36.12■■■■□ 3.37
RALGPS1-207ENST00000394022 TRIM41Q8WV44 630 aa36.07■■■■□ 3.36
RALGPS1-207ENST00000394022 CC2D2AQ9P2K1 1620 aa35.83■■■■□ 3.33
RALGPS1-207ENST00000394022 ABCC8Q09428 1581 aa35.75■■■■□ 3.31
RALGPS1-207ENST00000394022 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
RALGPS1-207ENST00000394022 LOC105371045A0A1W2PR82 267 aa35.44■■■■□ 3.26
RALGPS1-207ENST00000394022 CFTRP13569 1480 aa35.41■■■■□ 3.26
RALGPS1-207ENST00000394022 FAM9AQ8IZU1 332 aaPredicted RBP35.41■■■■□ 3.26
RALGPS1-207ENST00000394022 PRDM2Q13029 1718 aa35.33■■■■□ 3.25
RALGPS1-207ENST00000394022 SYNJ1O43426 1573 aa35.33■■■■□ 3.25
RALGPS1-207ENST00000394022 CADPSQ9ULU8 1353 aa35.24■■■■□ 3.23
RALGPS1-207ENST00000394022 TOP2BQ02880 1626 aa35.18■■■■□ 3.22
RALGPS1-207ENST00000394022 EEA1Q15075 1411 aa35.16■■■■□ 3.22
RALGPS1-207ENST00000394022 BIVM-ERCC5R4GMW8 1640 aa35.15■■■■□ 3.22
RALGPS1-207ENST00000394022 SOGA1O94964 1423 aa35.11■■■■□ 3.21
RALGPS1-207ENST00000394022 CUX1P39880 1505 aa35■■■■□ 3.19
RALGPS1-207ENST00000394022 RUSC2Q8N2Y8 1516 aa34.95■■■■□ 3.18
RALGPS1-207ENST00000394022 EHMT2Q96KQ7 1210 aa34.9■■■■□ 3.18
RALGPS1-207ENST00000394022 LAMC3Q9Y6N6 1575 aa34.9■■■■□ 3.18
RALGPS1-207ENST00000394022 CSRNP3Q8WYN3 585 aa34.89■■■■□ 3.18
RALGPS1-207ENST00000394022 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
RALGPS1-207ENST00000394022 NESP48681 1621 aa34.83■■■■□ 3.17
RALGPS1-207ENST00000394022 DNAJC5BQ9UF47 199 aa34.73■■■■□ 3.15
RALGPS1-207ENST00000394022 GOLGA3Q08378 1498 aa34.69■■■■□ 3.14
RALGPS1-207ENST00000394022 KIF21BO75037 1637 aa34.69■■■■□ 3.14
RALGPS1-207ENST00000394022 CEP164Q9UPV0 1460 aa34.66■■■■□ 3.14
RALGPS1-207ENST00000394022 DNMBPQ6XZF7 1577 aa34.63■■■■□ 3.13
RALGPS1-207ENST00000394022 PDS5BQ9NTI5 1447 aa34.61■■■■□ 3.13
RALGPS1-207ENST00000394022 TNIKQ9UKE5 1360 aa34.6■■■■□ 3.13
RALGPS1-207ENST00000394022 KIF27Q86VH2 1401 aa34.58■■■■□ 3.13
RALGPS1-207ENST00000394022 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
RALGPS1-207ENST00000394022 TOPBP1Q92547 1522 aa34.52■■■■□ 3.12
RALGPS1-207ENST00000394022 UBTFP17480 764 aaKnown RBP34.5■■■■□ 3.11
RALGPS1-207ENST00000394022 KIF21AQ7Z4S6 1674 aa34.45■■■■□ 3.11
RALGPS1-207ENST00000394022 CEP162Q5TB80 1403 aa34.45■■■■□ 3.11
RALGPS1-207ENST00000394022 CUX2O14529 1486 aa34.43■■■■□ 3.1
RALGPS1-207ENST00000394022 RAPGEF2Q9Y4G8 1499 aa34.4■■■■□ 3.1
RALGPS1-207ENST00000394022 URB2Q14146 1524 aaKnown RBP34.4■■■■□ 3.1
RALGPS1-207ENST00000394022 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
RALGPS1-207ENST00000394022 PRXQ9BXM0 1461 aa34.39■■■■□ 3.1
RALGPS1-207ENST00000394022 POLA1P09884 1462 aaPredicted RBP34.37■■■■□ 3.09
RALGPS1-207ENST00000394022 ABCA10Q8WWZ4 1543 aa34.28■■■■□ 3.08
RALGPS1-207ENST00000394022 RAD54L2Q9Y4B4 1467 aa34.25■■■■□ 3.07
RALGPS1-207ENST00000394022 IGF1RP08069 1367 aa34.19■■■■□ 3.06
RALGPS1-207ENST00000394022 WDR97A6NE52 1622 aa34.17■■■■□ 3.06
RALGPS1-207ENST00000394022 MRC2Q9UBG0 1479 aa34.16■■■■□ 3.06
RALGPS1-207ENST00000394022 PCGF6Q9BYE7 350 aa34.15■■■■□ 3.06
RALGPS1-207ENST00000394022 CLIP1P30622 1438 aa34.13■■■■□ 3.05
RALGPS1-207ENST00000394022 TRIM26Q12899 539 aaPredicted RBP34.1■■■■□ 3.05
RALGPS1-207ENST00000394022 CARMIL1Q5VZK9 1371 aa34.06■■■■□ 3.04
RALGPS1-207ENST00000394022 ABCA5Q8WWZ7 1642 aa33.99■■■■□ 3.03
RALGPS1-207ENST00000394022 CUL7Q14999 1698 aa33.99■■■■□ 3.03
RALGPS1-207ENST00000394022 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
RALGPS1-207ENST00000394022 WDR62O43379 1518 aa33.96■■■■□ 3.03
RALGPS1-207ENST00000394022 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
RALGPS1-207ENST00000394022 GAPVD1Q14C86 1478 aa33.9■■■■□ 3.02
RALGPS1-207ENST00000394022 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
RALGPS1-207ENST00000394022 VPS8Q8N3P4 1428 aa33.87■■■■□ 3.01
RALGPS1-207ENST00000394022 RANGAP1P46060 587 aaPredicted RBP33.85■■■■□ 3.01
RALGPS1-207ENST00000394022 THOC2Q8NI27 1593 aaKnown RBP33.79■■■■□ 3
RALGPS1-207ENST00000394022 IFT140Q96RY7 1462 aa33.79■■■■□ 3
RALGPS1-207ENST00000394022 PPARGC1BQ86YN6 1023 aaKnown RBP33.78■■■■□ 3
RALGPS1-207ENST00000394022 ARAP1Q96P48 1450 aa33.74■■■□□ 2.99
RALGPS1-207ENST00000394022 PBRM1Q86U86 1689 aa33.73■■■□□ 2.99
RALGPS1-207ENST00000394022 ARHGAP35Q9NRY4 1499 aa33.68■■■□□ 2.98
RALGPS1-207ENST00000394022 CTTNBP2Q8WZ74 1663 aa33.66■■■□□ 2.98
RALGPS1-207ENST00000394022 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.97
RALGPS1-207ENST00000394022 GRIN2BQ13224 1484 aa33.6■■■□□ 2.97
RALGPS1-207ENST00000394022 APLP2Q06481 763 aa33.58■■■□□ 2.97
RALGPS1-207ENST00000394022 ZNF608Q9ULD9 1512 aaPredicted RBP33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms