Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 CALM3-204ENST00000482455 650 ntTSL 48.27□□□□□ -1.091e-8■□□□□ 8.3
EIF3DO15371 CCNB1-203ENST00000505500 1190 ntTSL 1 (best)7.98□□□□□ -1.132e-12■□□□□ 8.3
EIF3DO15371 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.36■■□□□ 1.498e-9■□□□□ 8.2
EIF3DO15371 ANKRD11-211ENST00000566973 442 ntTSL 221.51■■□□□ 1.031e-12■□□□□ 8.2
EIF3DO15371 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.28■■□□□ 18e-9■□□□□ 8.2
EIF3DO15371 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.12■□□□□ 0.018e-9■□□□□ 8.2
EIF3DO15371 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.04■□□□□ -08e-9■□□□□ 8.2
EIF3DO15371 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.038e-9■□□□□ 8.2
EIF3DO15371 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.16□□□□□ -0.148e-9■□□□□ 8.2
EIF3DO15371 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC11.41□□□□□ -0.588e-9■□□□□ 8.2
EIF3DO15371 AFDN-204ENST00000366809 4839 ntTSL 1 (best)10.12□□□□□ -0.798e-9■□□□□ 8.2
EIF3DO15371 ANKRD11-215ENST00000568512 294 ntTSL 29.99□□□□□ -0.811e-12■□□□□ 8.2
EIF3DO15371 AFDN-210ENST00000423229 1807 ntTSL 1 (best)8.72□□□□□ -1.018e-9■□□□□ 8.2
EIF3DO15371 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.54■■□□□ 1.362e-7■□□□□ 8.2
EIF3DO15371 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.082e-7■□□□□ 8.2
EIF3DO15371 RBM14-RBM4-202ENST00000421355 2034 ntTSL 220.82■□□□□ 0.922e-7■□□□□ 8.2
EIF3DO15371 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.78■□□□□ 0.762e-7■□□□□ 8.2
EIF3DO15371 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.532e-7■□□□□ 8.2
EIF3DO15371 RBM4-208ENST00000510173 782 ntTSL 315.32■□□□□ 0.042e-7■□□□□ 8.2
EIF3DO15371 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -02e-7■□□□□ 8.2
EIF3DO15371 POLR3E-218ENST00000569787 727 ntTSL 314.64□□□□□ -0.072e-7■□□□□ 8.2
EIF3DO15371 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.07□□□□□ -0.162e-7■□□□□ 8.2
EIF3DO15371 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.07□□□□□ -0.162e-7■□□□□ 8.2
EIF3DO15371 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC13.85□□□□□ -0.192e-7■□□□□ 8.2
EIF3DO15371 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.37□□□□□ -0.272e-7■□□□□ 8.2
EIF3DO15371 RBM4-212ENST00000532968 757 ntTSL 2 BASIC12.34□□□□□ -0.432e-7■□□□□ 8.2
EIF3DO15371 RBM4-210ENST00000528039 764 ntTSL 311.57□□□□□ -0.562e-7■□□□□ 8.2
EIF3DO15371 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC11.05□□□□□ -0.642e-7■□□□□ 8.2
EIF3DO15371 HTT-208ENST00000510626 14438 ntTSL 1 (best)9.6□□□□□ -0.872e-7■□□□□ 8.2
EIF3DO15371 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.912e-7■□□□□ 8.2
EIF3DO15371 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.33□□□□□ -1.082e-7■□□□□ 8.2
EIF3DO15371 MBNL3-208ENST00000436215 891 ntTSL 35.81□□□□□ -1.482e-7■□□□□ 8.2
EIF3DO15371 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.428e-8■□□□□ 8.2
EIF3DO15371 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.138e-8■□□□□ 8.2
EIF3DO15371 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.17□□□□□ -0.148e-8■□□□□ 8.2
EIF3DO15371 HECTD1-208ENST00000554882 3748 ntTSL 55.26□□□□□ -1.578e-8■□□□□ 8.2
EIF3DO15371 HECTD1-210ENST00000555843 4281 ntTSL 25.09□□□□□ -1.598e-8■□□□□ 8.2
EIF3DO15371 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.08■■□□□ 1.614e-16■□□□□ 8.2
EIF3DO15371 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.59■□□□□ 0.414e-16■□□□□ 8.2
EIF3DO15371 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.51■□□□□ 0.234e-16■□□□□ 8.2
EIF3DO15371 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC14.73□□□□□ -0.054e-16■□□□□ 8.2
EIF3DO15371 HACD3-208ENST00000566239 393 ntTSL 214.33□□□□□ -0.124e-16■□□□□ 8.2
EIF3DO15371 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.124e-16■□□□□ 8.2
EIF3DO15371 NCL-205ENST00000453992 964 ntTSL 421.18■□□□□ 0.984e-20■□□□□ 8.2
EIF3DO15371 NCL-203ENST00000417652 568 ntTSL 47.49□□□□□ -1.214e-20■□□□□ 8.2
EIF3DO15371 NCL-206ENST00000454824 606 ntTSL 37.49□□□□□ -1.214e-20■□□□□ 8.2
EIF3DO15371 NCL-204ENST00000436894 562 ntTSL 44.5□□□□□ -1.694e-20■□□□□ 8.2
EIF3DO15371 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.81■■□□□ 1.082e-15■□□□□ 8.2
EIF3DO15371 HSPA8-219ENST00000532780 1194 ntTSL 219.67■□□□□ 0.742e-15■□□□□ 8.2
EIF3DO15371 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.632e-15■□□□□ 8.2
EIF3DO15371 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.11■□□□□ 0.012e-15■□□□□ 8.2
EIF3DO15371 HSPA8-206ENST00000525624 1048 ntTSL 514.71□□□□□ -0.052e-15■□□□□ 8.2
EIF3DO15371 HSPA8-210ENST00000527387 579 ntTSL 414.48□□□□□ -0.092e-15■□□□□ 8.2
EIF3DO15371 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)12.82□□□□□ -0.362e-15■□□□□ 8.2
EIF3DO15371 HSPA8-220ENST00000533238 465 ntTSL 36.95□□□□□ -1.32e-15■□□□□ 8.2
EIF3DO15371 HSPA8-212ENST00000528292 1112 ntTSL 26.58□□□□□ -1.362e-15■□□□□ 8.2
EIF3DO15371 HSPA8-216ENST00000532167 570 ntTSL 45.03□□□□□ -1.62e-15■□□□□ 8.2
EIF3DO15371 HSPA8-205ENST00000525463 583 ntTSL 53.63□□□□□ -1.832e-15■□□□□ 8.2
EIF3DO15371 HSPA8-214ENST00000531063 578 ntTSL 23.12□□□□□ -1.912e-15■□□□□ 8.2
EIF3DO15371 RPL38-205ENST00000530646 2450 ntTSL 1 (best)19.11■□□□□ 0.657e-10■□□□□ 8.2
EIF3DO15371 RPL38-203ENST00000528433 169 ntTSL 514.09□□□□□ -0.157e-10■□□□□ 8.2
EIF3DO15371 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.237e-10■□□□□ 8.2
EIF3DO15371 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.47e-10■□□□□ 8.2
EIF3DO15371 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.67e-10■□□□□ 8.2
EIF3DO15371 RPL38-204ENST00000529123 576 ntTSL 211.29□□□□□ -0.67e-10■□□□□ 8.2
EIF3DO15371 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.87e-10■□□□□ 8.2
EIF3DO15371 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.53□□□□□ -1.687e-10■□□□□ 8.2
EIF3DO15371 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.55■■■□□ 24e-7■□□□□ 8.2
EIF3DO15371 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.734e-7■□□□□ 8.2
EIF3DO15371 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.79■■□□□ 1.44e-7■□□□□ 8.2
EIF3DO15371 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.95■□□□□ 0.784e-7■□□□□ 8.2
EIF3DO15371 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.41■□□□□ 0.74e-7■□□□□ 8.2
EIF3DO15371 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.14e-7■□□□□ 8.2
EIF3DO15371 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC12.68□□□□□ -0.384e-7■□□□□ 8.2
EIF3DO15371 SETD2-209ENST00000638947 1984 ntTSL 5 BASIC12.38□□□□□ -0.434e-7■□□□□ 8.2
EIF3DO15371 SETD2-207ENST00000484689 561 ntTSL 49.02□□□□□ -0.974e-7■□□□□ 8.2
EIF3DO15371 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.274e-7■□□□□ 8.2
EIF3DO15371 SETD2-204ENST00000431180 7555 ntTSL 26.06□□□□□ -1.444e-7■□□□□ 8.2
EIF3DO15371 SETD2-201ENST00000330022 8172 ntTSL 1 (best)5.8□□□□□ -1.484e-7■□□□□ 8.2
EIF3DO15371 WDR59-215ENST00000568462 550 ntTSL 45.15□□□□□ -1.594e-7■□□□□ 8.2
EIF3DO15371 SETD2-205ENST00000445387 7075 ntTSL 54.59□□□□□ -1.684e-7■□□□□ 8.2
EIF3DO15371 NCL-207ENST00000461347 3967 ntTSL 215.41■□□□□ 0.061e-7■□□□□ 8.1
EIF3DO15371 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.291e-7■□□□□ 8.1
EIF3DO15371 PLXND1-202ENST00000501038 1633 ntTSL 1 (best)20.5■□□□□ 0.872e-7■□□□□ 8.1
EIF3DO15371 PLXND1-204ENST00000504524 1701 ntTSL 1 (best)20.3■□□□□ 0.842e-7■□□□□ 8.1
EIF3DO15371 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.19■□□□□ 0.822e-7■□□□□ 8.1
EIF3DO15371 PLXND1-214ENST00000512744 2662 ntTSL 1 (best)17.95■□□□□ 0.462e-7■□□□□ 8.1
EIF3DO15371 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.322e-7■□□□□ 8.1
EIF3DO15371 NCL-210ENST00000494618 910 ntTSL 24.98□□□□□ -1.612e-7■□□□□ 8.1
EIF3DO15371 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.038e-7■□□□□ 8.1
EIF3DO15371 AURKAIP1-205ENST00000489799 695 ntTSL 1 (best)26.65■■□□□ 1.868e-7■□□□□ 8.1
EIF3DO15371 CPOX-205ENST00000515041 1030 ntTSL 226.61■■□□□ 1.858e-7■□□□□ 8.1
EIF3DO15371 CPOX-204ENST00000513674 826 ntTSL 524.93■■□□□ 1.588e-7■□□□□ 8.1
EIF3DO15371 ATP6V0B-208ENST00000473485 1664 ntTSL 224.74■■□□□ 1.555e-11■□□□□ 8.1
EIF3DO15371 ATP6V0B-210ENST00000498208 419 ntTSL 524.69■■□□□ 1.545e-11■□□□□ 8.1
EIF3DO15371 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.498e-7■□□□□ 8.1
EIF3DO15371 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.458e-7■□□□□ 8.1
EIF3DO15371 ATP6V0B-203ENST00000468183 2432 ntTSL 1 (best)23.96■■□□□ 1.435e-11■□□□□ 8.1
EIF3DO15371 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.03■■□□□ 1.285e-11■□□□□ 8.1
EIF3DO15371 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.255e-11■□□□□ 8.1
Retrieved 100 of 4,069 protein–RNA pairs in 267.5 ms