RNA–Protein interactions for RNA: ENST00000569787.1

POLR3E-218, Transcript of RNA polymerase III subunit E, humanhuman

TSL 3

Gene POLR3E, Length 727 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-218ENST00000569787 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
POLR3E-218ENST00000569787 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
POLR3E-218ENST00000569787 ABCC9O60706 1549 aa29.16■■■□□ 2.26
POLR3E-218ENST00000569787 RB1CC1Q8TDY2 1594 aa27.96■■■□□ 2.07
POLR3E-218ENST00000569787 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
POLR3E-218ENST00000569787 NACADO15069 1562 aa27.83■■■□□ 2.05
POLR3E-218ENST00000569787 MYO15BQ96JP2 1530 aa27.51■■■□□ 2
POLR3E-218ENST00000569787 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
POLR3E-218ENST00000569787 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
POLR3E-218ENST00000569787 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
POLR3E-218ENST00000569787 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
POLR3E-218ENST00000569787 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
POLR3E-218ENST00000569787 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
POLR3E-218ENST00000569787 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
POLR3E-218ENST00000569787 SHROOM4Q9ULL8 1493 aa26.78■■□□□ 1.88
POLR3E-218ENST00000569787 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
POLR3E-218ENST00000569787 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
POLR3E-218ENST00000569787 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
POLR3E-218ENST00000569787 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
POLR3E-218ENST00000569787 BAZ1AQ9NRL2 1556 aaPredicted RBP25.67■■□□□ 1.7
POLR3E-218ENST00000569787 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
POLR3E-218ENST00000569787 NCAPD3P42695 1498 aa25.63■■□□□ 1.69
POLR3E-218ENST00000569787 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
POLR3E-218ENST00000569787 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
POLR3E-218ENST00000569787 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
POLR3E-218ENST00000569787 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
POLR3E-218ENST00000569787 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
POLR3E-218ENST00000569787 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
POLR3E-218ENST00000569787 WIZO95785 1651 aa25.16■■□□□ 1.62
POLR3E-218ENST00000569787 NESP48681 1621 aa25.1■■□□□ 1.61
POLR3E-218ENST00000569787 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
POLR3E-218ENST00000569787 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
POLR3E-218ENST00000569787 CUX2O14529 1486 aa25.02■■□□□ 1.6
POLR3E-218ENST00000569787 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.59
POLR3E-218ENST00000569787 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
POLR3E-218ENST00000569787 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
POLR3E-218ENST00000569787 KIF21AQ7Z4S6 1674 aa24.83■■□□□ 1.57
POLR3E-218ENST00000569787 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
POLR3E-218ENST00000569787 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
POLR3E-218ENST00000569787 CFTRP13569 1480 aa24.67■■□□□ 1.54
POLR3E-218ENST00000569787 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
POLR3E-218ENST00000569787 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.54
POLR3E-218ENST00000569787 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
POLR3E-218ENST00000569787 WDR62O43379 1518 aa24.55■■□□□ 1.52
POLR3E-218ENST00000569787 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
POLR3E-218ENST00000569787 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
POLR3E-218ENST00000569787 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
POLR3E-218ENST00000569787 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
POLR3E-218ENST00000569787 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
POLR3E-218ENST00000569787 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
POLR3E-218ENST00000569787 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
POLR3E-218ENST00000569787 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
POLR3E-218ENST00000569787 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
POLR3E-218ENST00000569787 ZNF608Q9ULD9 1512 aaPredicted RBP23.99■■□□□ 1.43
POLR3E-218ENST00000569787 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
POLR3E-218ENST00000569787 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
POLR3E-218ENST00000569787 SOGA1O94964 1423 aa23.92■■□□□ 1.42
POLR3E-218ENST00000569787 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
POLR3E-218ENST00000569787 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
POLR3E-218ENST00000569787 CUX1P39880 1505 aa23.87■■□□□ 1.41
POLR3E-218ENST00000569787 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.413e-9■■■■■ 27.7
POLR3E-218ENST00000569787 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
POLR3E-218ENST00000569787 FBLN2P98095 1184 aa23.79■■□□□ 1.4
POLR3E-218ENST00000569787 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
POLR3E-218ENST00000569787 WDR97A6NE52 1622 aa23.78■■□□□ 1.4
POLR3E-218ENST00000569787 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
POLR3E-218ENST00000569787 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
POLR3E-218ENST00000569787 CHD1O14646 1710 aa23.69■■□□□ 1.38
POLR3E-218ENST00000569787 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
POLR3E-218ENST00000569787 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
POLR3E-218ENST00000569787 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
POLR3E-218ENST00000569787 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
POLR3E-218ENST00000569787 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
POLR3E-218ENST00000569787 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
POLR3E-218ENST00000569787 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
POLR3E-218ENST00000569787 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
POLR3E-218ENST00000569787 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
POLR3E-218ENST00000569787 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
POLR3E-218ENST00000569787 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
POLR3E-218ENST00000569787 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
POLR3E-218ENST00000569787 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
POLR3E-218ENST00000569787 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
POLR3E-218ENST00000569787 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
POLR3E-218ENST00000569787 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
POLR3E-218ENST00000569787 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
POLR3E-218ENST00000569787 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
POLR3E-218ENST00000569787 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
POLR3E-218ENST00000569787 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
POLR3E-218ENST00000569787 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
POLR3E-218ENST00000569787 GRIN2AQ12879 1464 aa23.34■■□□□ 1.33
POLR3E-218ENST00000569787 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
POLR3E-218ENST00000569787 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
POLR3E-218ENST00000569787 NUP160Q12769 1436 aa23.2■■□□□ 1.3
POLR3E-218ENST00000569787 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
POLR3E-218ENST00000569787 CUL7Q14999 1698 aa23.13■■□□□ 1.29
POLR3E-218ENST00000569787 TRHP20396 242 aaPredicted RBP23.11■■□□□ 1.29
POLR3E-218ENST00000569787 IGF1RP08069 1367 aa23.1■■□□□ 1.29
POLR3E-218ENST00000569787 SHROOM2Q13796 1616 aa23.04■■□□□ 1.28
POLR3E-218ENST00000569787 JPH4Q96JJ6 628 aa23.04■■□□□ 1.28
POLR3E-218ENST00000569787 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms