RNA–Protein interactions for RNA: ENST00000565299.5

HACD3-206, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-206ENST00000565299 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
HACD3-206ENST00000565299 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
HACD3-206ENST00000565299 ABCC9O60706 1549 aa32.73■■■□□ 2.83
HACD3-206ENST00000565299 DCAF8L2P0C7V8 631 aa31.97■■■□□ 2.71
HACD3-206ENST00000565299 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
HACD3-206ENST00000565299 NACADO15069 1562 aa31.57■■■□□ 2.64
HACD3-206ENST00000565299 RB1CC1Q8TDY2 1594 aa31.52■■■□□ 2.64
HACD3-206ENST00000565299 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
HACD3-206ENST00000565299 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
HACD3-206ENST00000565299 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
HACD3-206ENST00000565299 PABPN1Q86U42 306 aaKnown RBP eCLIP30.76■■■□□ 2.51
HACD3-206ENST00000565299 UNC13AQ9UPW8 1703 aa30.67■■■□□ 2.5
HACD3-206ENST00000565299 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
HACD3-206ENST00000565299 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
HACD3-206ENST00000565299 DNAJC5BQ9UF47 199 aa30.29■■■□□ 2.44
HACD3-206ENST00000565299 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
HACD3-206ENST00000565299 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
HACD3-206ENST00000565299 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
HACD3-206ENST00000565299 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
HACD3-206ENST00000565299 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
HACD3-206ENST00000565299 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.3
HACD3-206ENST00000565299 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
HACD3-206ENST00000565299 RSF1Q96T23 1441 aaPredicted RBP29.22■■■□□ 2.27
HACD3-206ENST00000565299 SMARCA2P51531 1590 aa29.19■■■□□ 2.26
HACD3-206ENST00000565299 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
HACD3-206ENST00000565299 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
HACD3-206ENST00000565299 WIZO95785 1651 aa29.05■■■□□ 2.24
HACD3-206ENST00000565299 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
HACD3-206ENST00000565299 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
HACD3-206ENST00000565299 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
HACD3-206ENST00000565299 TOP2AP11388 1531 aaKnown RBP28.76■■■□□ 2.19
HACD3-206ENST00000565299 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.15
HACD3-206ENST00000565299 CADPSQ9ULU8 1353 aa28.41■■■□□ 2.14
HACD3-206ENST00000565299 NESP48681 1621 aa28.4■■■□□ 2.14
HACD3-206ENST00000565299 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
HACD3-206ENST00000565299 CFTRP13569 1480 aa28.26■■■□□ 2.11
HACD3-206ENST00000565299 PDS5BQ9NTI5 1447 aa28.2■■■□□ 2.1
HACD3-206ENST00000565299 ERCC6Q03468 1493 aa28.19■■■□□ 2.1
HACD3-206ENST00000565299 FANCD2Q9BXW9 1451 aa28.05■■■□□ 2.08
HACD3-206ENST00000565299 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
HACD3-206ENST00000565299 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
HACD3-206ENST00000565299 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
HACD3-206ENST00000565299 MRC2Q9UBG0 1479 aa27.84■■■□□ 2.05
HACD3-206ENST00000565299 CUX2O14529 1486 aa27.81■■■□□ 2.04
HACD3-206ENST00000565299 THOC2Q8NI27 1593 aaKnown RBP27.77■■■□□ 2.04
HACD3-206ENST00000565299 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
HACD3-206ENST00000565299 WDR62O43379 1518 aa27.67■■■□□ 2.02
HACD3-206ENST00000565299 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
HACD3-206ENST00000565299 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
HACD3-206ENST00000565299 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
HACD3-206ENST00000565299 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
HACD3-206ENST00000565299 CUX1P39880 1505 aa27.53■■■□□ 2
HACD3-206ENST00000565299 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
HACD3-206ENST00000565299 POLA1P09884 1462 aaPredicted RBP27.41■■□□□ 1.98
HACD3-206ENST00000565299 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
HACD3-206ENST00000565299 SOGA1O94964 1423 aa27.39■■□□□ 1.97
HACD3-206ENST00000565299 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
HACD3-206ENST00000565299 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
HACD3-206ENST00000565299 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
HACD3-206ENST00000565299 TOP2BQ02880 1626 aa27.35■■□□□ 1.97
HACD3-206ENST00000565299 BIVM-ERCC5R4GMW8 1640 aa27.29■■□□□ 1.96
HACD3-206ENST00000565299 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
HACD3-206ENST00000565299 ZNF608Q9ULD9 1512 aaPredicted RBP27.24■■□□□ 1.95
HACD3-206ENST00000565299 TARBP1Q13395 1621 aaKnown RBP27.22■■□□□ 1.95
HACD3-206ENST00000565299 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
HACD3-206ENST00000565299 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.941e-6■■■■□ 23.2
HACD3-206ENST00000565299 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
HACD3-206ENST00000565299 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.93
HACD3-206ENST00000565299 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
HACD3-206ENST00000565299 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
HACD3-206ENST00000565299 WDR97A6NE52 1622 aa27■■□□□ 1.91
HACD3-206ENST00000565299 GRIN2BQ13224 1484 aa26.96■■□□□ 1.91
HACD3-206ENST00000565299 KIF27Q86VH2 1401 aa26.95■■□□□ 1.91
HACD3-206ENST00000565299 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
HACD3-206ENST00000565299 FBLN2P98095 1184 aa26.9■■□□□ 1.9
HACD3-206ENST00000565299 SNAPC4Q5SXM2 1469 aa26.88■■□□□ 1.89
HACD3-206ENST00000565299 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
HACD3-206ENST00000565299 IGF1RP08069 1367 aa26.84■■□□□ 1.89
HACD3-206ENST00000565299 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
HACD3-206ENST00000565299 MAGI1Q96QZ7 1491 aaPredicted RBP26.82■■□□□ 1.88
HACD3-206ENST00000565299 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
HACD3-206ENST00000565299 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
HACD3-206ENST00000565299 OSCARQ8IYS5 282 aa26.75■■□□□ 1.87
HACD3-206ENST00000565299 FAM9AQ8IZU1 332 aaPredicted RBP26.75■■□□□ 1.87
HACD3-206ENST00000565299 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
HACD3-206ENST00000565299 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
HACD3-206ENST00000565299 CARMIL1Q5VZK9 1371 aa26.69■■□□□ 1.86
HACD3-206ENST00000565299 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
HACD3-206ENST00000565299 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
HACD3-206ENST00000565299 EEA1Q15075 1411 aa26.64■■□□□ 1.85
HACD3-206ENST00000565299 CHD1O14646 1710 aa26.6■■□□□ 1.85
HACD3-206ENST00000565299 GRIN2AQ12879 1464 aa26.59■■□□□ 1.85
HACD3-206ENST00000565299 CUL7Q14999 1698 aa26.56■■□□□ 1.84
HACD3-206ENST00000565299 RAPGEF2Q9Y4G8 1499 aa26.52■■□□□ 1.84
HACD3-206ENST00000565299 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
HACD3-206ENST00000565299 NUP160Q12769 1436 aa26.46■■□□□ 1.83
HACD3-206ENST00000565299 EHMT2Q96KQ7 1210 aa26.43■■□□□ 1.82
HACD3-206ENST00000565299 CEP170Q5SW79 1584 aa26.42■■□□□ 1.82
HACD3-206ENST00000565299 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
HACD3-206ENST00000565299 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms