RNA–Protein interactions for RNA: ENST00000311111.10

RPL38-201, Transcript of ribosomal protein L38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPL38, Length 1,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-201ENST00000311111 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
RPL38-201ENST00000311111 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
RPL38-201ENST00000311111 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
RPL38-201ENST00000311111 ABCC9O60706 1549 aa23.04■■□□□ 1.28
RPL38-201ENST00000311111 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
RPL38-201ENST00000311111 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
RPL38-201ENST00000311111 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
RPL38-201ENST00000311111 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
RPL38-201ENST00000311111 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
RPL38-201ENST00000311111 NACADO15069 1562 aa21.36■■□□□ 1.01
RPL38-201ENST00000311111 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
RPL38-201ENST00000311111 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
RPL38-201ENST00000311111 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
RPL38-201ENST00000311111 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
RPL38-201ENST00000311111 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
RPL38-201ENST00000311111 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
RPL38-201ENST00000311111 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
RPL38-201ENST00000311111 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
RPL38-201ENST00000311111 SCRIBQ14160 1630 aa20.54■□□□□ 0.88
RPL38-201ENST00000311111 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
RPL38-201ENST00000311111 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
RPL38-201ENST00000311111 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
RPL38-201ENST00000311111 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
RPL38-201ENST00000311111 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
RPL38-201ENST00000311111 CUX2O14529 1486 aa19.95■□□□□ 0.78
RPL38-201ENST00000311111 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
RPL38-201ENST00000311111 NCAPD3P42695 1498 aa19.75■□□□□ 0.75
RPL38-201ENST00000311111 NESP48681 1621 aa19.67■□□□□ 0.74
RPL38-201ENST00000311111 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
RPL38-201ENST00000311111 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
RPL38-201ENST00000311111 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
RPL38-201ENST00000311111 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
RPL38-201ENST00000311111 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
RPL38-201ENST00000311111 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
RPL38-201ENST00000311111 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
RPL38-201ENST00000311111 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
RPL38-201ENST00000311111 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
RPL38-201ENST00000311111 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
RPL38-201ENST00000311111 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
RPL38-201ENST00000311111 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
RPL38-201ENST00000311111 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
RPL38-201ENST00000311111 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
RPL38-201ENST00000311111 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
RPL38-201ENST00000311111 WDR62O43379 1518 aa19.12■□□□□ 0.65
RPL38-201ENST00000311111 ADRA2BP18089 450 aa19.01■□□□□ 0.63
RPL38-201ENST00000311111 OSCARQ8IYS5 282 aa19■□□□□ 0.63
RPL38-201ENST00000311111 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
RPL38-201ENST00000311111 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
RPL38-201ENST00000311111 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
RPL38-201ENST00000311111 WIZO95785 1651 aa18.92■□□□□ 0.62
RPL38-201ENST00000311111 KCNA4P22459 653 aa18.91■□□□□ 0.62
RPL38-201ENST00000311111 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
RPL38-201ENST00000311111 CFTRP13569 1480 aa18.84■□□□□ 0.61
RPL38-201ENST00000311111 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
RPL38-201ENST00000311111 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
RPL38-201ENST00000311111 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
RPL38-201ENST00000311111 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
RPL38-201ENST00000311111 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
RPL38-201ENST00000311111 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
RPL38-201ENST00000311111 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
RPL38-201ENST00000311111 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
RPL38-201ENST00000311111 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
RPL38-201ENST00000311111 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
RPL38-201ENST00000311111 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
RPL38-201ENST00000311111 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
RPL38-201ENST00000311111 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
RPL38-201ENST00000311111 EIF4G3O43432 1585 aaKnown RBP18.52■□□□□ 0.56
RPL38-201ENST00000311111 FOXD1Q16676 465 aa18.52■□□□□ 0.56
RPL38-201ENST00000311111 PRDM2Q13029 1718 aa18.48■□□□□ 0.55
RPL38-201ENST00000311111 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
RPL38-201ENST00000311111 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.552e-7■■■■■ 32.3
RPL38-201ENST00000311111 FBLN2P98095 1184 aa18.47■□□□□ 0.55
RPL38-201ENST00000311111 CHD1O14646 1710 aa18.43■□□□□ 0.54
RPL38-201ENST00000311111 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
RPL38-201ENST00000311111 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
RPL38-201ENST00000311111 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
RPL38-201ENST00000311111 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
RPL38-201ENST00000311111 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
RPL38-201ENST00000311111 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
RPL38-201ENST00000311111 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
RPL38-201ENST00000311111 CLASP1Q7Z460 1538 aa18.24■□□□□ 0.51
RPL38-201ENST00000311111 SOGA1O94964 1423 aa18.23■□□□□ 0.51
RPL38-201ENST00000311111 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
RPL38-201ENST00000311111 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
RPL38-201ENST00000311111 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
RPL38-201ENST00000311111 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
RPL38-201ENST00000311111 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
RPL38-201ENST00000311111 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.49
RPL38-201ENST00000311111 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
RPL38-201ENST00000311111 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
RPL38-201ENST00000311111 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
RPL38-201ENST00000311111 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
RPL38-201ENST00000311111 CUX1P39880 1505 aa18.08■□□□□ 0.48
RPL38-201ENST00000311111 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
RPL38-201ENST00000311111 ERCC6L2Q5T890 1561 aa18■□□□□ 0.47
RPL38-201ENST00000311111 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
RPL38-201ENST00000311111 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
RPL38-201ENST00000311111 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
RPL38-201ENST00000311111 ABCA10Q8WWZ4 1543 aa17.89■□□□□ 0.45
RPL38-201ENST00000311111 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms