Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.52■■■■□ 3.6not detected
EIF3DO15371 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55not detected
EIF3DO15371 AL356512.1-201ENST00000607453 1739 ntBASIC36.66■■■■□ 3.46not detected
EIF3DO15371 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.57■■■■□ 3.45not detected
EIF3DO15371 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41not detected
EIF3DO15371 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.29■■■■□ 3.4not detected
EIF3DO15371 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4not detected
EIF3DO15371 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.93■■■■□ 3.34not detected
EIF3DO15371 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.88■■■■□ 3.33not detected
EIF3DO15371 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.81■■■■□ 3.32not detected
EIF3DO15371 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.65■■■■□ 3.3not detected
EIF3DO15371 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.59■■■■□ 3.29not detected
EIF3DO15371 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22not detected
EIF3DO15371 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.11■■■■□ 3.21not detected
EIF3DO15371 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.04■■■■□ 3.2not detected
EIF3DO15371 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.68■■■■□ 3.14not detected
EIF3DO15371 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13not detected
EIF3DO15371 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.59■■■■□ 3.13not detected
EIF3DO15371 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11not detected
EIF3DO15371 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1not detected
EIF3DO15371 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.42■■■■□ 3.1not detected
EIF3DO15371 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.42■■■■□ 3.1not detected
EIF3DO15371 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1not detected
EIF3DO15371 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.32■■■■□ 3.08not detected
EIF3DO15371 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.32■■■■□ 3.08not detected
EIF3DO15371 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.13■■■■□ 3.052e-8■■□□□ 11.7
EIF3DO15371 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.11■■■■□ 3.05not detected
EIF3DO15371 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.1■■■■□ 3.05not detected
EIF3DO15371 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04not detected
EIF3DO15371 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04not detected
EIF3DO15371 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.86■■■■□ 3.01not detected
EIF3DO15371 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.7■■■□□ 2.98not detected
EIF3DO15371 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98not detected
EIF3DO15371 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97not detected
EIF3DO15371 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.61■■■□□ 2.97not detected
EIF3DO15371 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96not detected
EIF3DO15371 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.962e-8■■□□□ 11.7
EIF3DO15371 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.52■■■□□ 2.96not detected
EIF3DO15371 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94not detected
EIF3DO15371 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93not detected
EIF3DO15371 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92not detected
EIF3DO15371 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.31■■■□□ 2.92not detected
EIF3DO15371 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92not detected
EIF3DO15371 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91not detected
EIF3DO15371 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91not detected
EIF3DO15371 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.18■■■□□ 2.9not detected
EIF3DO15371 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9not detected
EIF3DO15371 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9not detected
EIF3DO15371 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89not detected
EIF3DO15371 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.12■■■□□ 2.89not detected
EIF3DO15371 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.08■■■□□ 2.89not detected
EIF3DO15371 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.05■■■□□ 2.88not detected
EIF3DO15371 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.05■■■□□ 2.88not detected
EIF3DO15371 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.91■■■□□ 2.86not detected
EIF3DO15371 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85not detected
EIF3DO15371 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.86■■■□□ 2.85not detected
EIF3DO15371 AC015813.7-201ENST00000623294 581 ntBASIC32.77■■■□□ 2.84not detected
EIF3DO15371 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84not detected
EIF3DO15371 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83not detected
EIF3DO15371 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.7■■■□□ 2.83not detected
EIF3DO15371 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82not detected
EIF3DO15371 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.66■■■□□ 2.82not detected
EIF3DO15371 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82not detected
EIF3DO15371 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.63■■■□□ 2.81not detected
EIF3DO15371 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81not detected
EIF3DO15371 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.53■■■□□ 2.8not detected
EIF3DO15371 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.51■■■□□ 2.79not detected
EIF3DO15371 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79not detected
EIF3DO15371 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.51■■■□□ 2.79not detected
EIF3DO15371 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79not detected
EIF3DO15371 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79not detected
EIF3DO15371 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79not detected
EIF3DO15371 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78not detected
EIF3DO15371 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.39■■■□□ 2.78not detected
EIF3DO15371 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77not detected
EIF3DO15371 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.37■■■□□ 2.77not detected
EIF3DO15371 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.31■■■□□ 2.76not detected
EIF3DO15371 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75not detected
EIF3DO15371 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75not detected
EIF3DO15371 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.21■■■□□ 2.75not detected
EIF3DO15371 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.743e-16■□□□□ 8.3
EIF3DO15371 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.17■■■□□ 2.74not detected
EIF3DO15371 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.17■■■□□ 2.74not detected
EIF3DO15371 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73not detected
EIF3DO15371 AC006077.2-201ENST00000623591 457 ntBASIC32.13■■■□□ 2.73not detected
EIF3DO15371 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.11■■■□□ 2.732e-6■■□□□ 14
EIF3DO15371 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73not detected
EIF3DO15371 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73not detected
EIF3DO15371 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.07■■■□□ 2.72not detected
EIF3DO15371 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.05■■■□□ 2.729e-7■■■■■ 27.4
EIF3DO15371 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.722e-6■■■□□ 16.1
EIF3DO15371 AC145285.7-201ENST00000614819 1539 ntBASIC32.05■■■□□ 2.72not detected
EIF3DO15371 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71not detected
EIF3DO15371 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.93■■■□□ 2.7not detected
EIF3DO15371 ZNRF2P1-201ENST00000441407 443 ntBASIC31.92■■■□□ 2.7not detected
EIF3DO15371 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7not detected
EIF3DO15371 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.91■■■□□ 2.7not detected
EIF3DO15371 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.9■■■□□ 2.7not detected
EIF3DO15371 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.77■■■□□ 2.68not detected
EIF3DO15371 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67not detected
Retrieved 100 of 98,524 protein–RNA pairs in 264.9 ms