RNA–Protein interactions for RNA: ENST00000528433.2

RPL38-203, Transcript of ribosomal protein L38, humanhuman

TSL 5

Gene RPL38, Length 169 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-203ENST00000528433 NISCHQ9Y2I1 1504 aa31.42■■■□□ 2.62
RPL38-203ENST00000528433 CCDC180Q9P1Z9 1646 aa27.8■■■□□ 2.04
RPL38-203ENST00000528433 ABCC9O60706 1549 aa27.31■■□□□ 1.96
RPL38-203ENST00000528433 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
RPL38-203ENST00000528433 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.78
RPL38-203ENST00000528433 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
RPL38-203ENST00000528433 NACADO15069 1562 aa26.12■■□□□ 1.77
RPL38-203ENST00000528433 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
RPL38-203ENST00000528433 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
RPL38-203ENST00000528433 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
RPL38-203ENST00000528433 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
RPL38-203ENST00000528433 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
RPL38-203ENST00000528433 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
RPL38-203ENST00000528433 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
RPL38-203ENST00000528433 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
RPL38-203ENST00000528433 EIF4G1Q04637 1599 aaKnown RBP24.75■■□□□ 1.55
RPL38-203ENST00000528433 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.54
RPL38-203ENST00000528433 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
RPL38-203ENST00000528433 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
RPL38-203ENST00000528433 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
RPL38-203ENST00000528433 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
RPL38-203ENST00000528433 ATAD2BQ9ULI0 1458 aa24.22■■□□□ 1.47
RPL38-203ENST00000528433 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
RPL38-203ENST00000528433 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
RPL38-203ENST00000528433 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
RPL38-203ENST00000528433 WIZO95785 1651 aa24.04■■□□□ 1.44
RPL38-203ENST00000528433 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
RPL38-203ENST00000528433 HMGXB3Q12766 1538 aa24■■□□□ 1.43
RPL38-203ENST00000528433 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
RPL38-203ENST00000528433 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
RPL38-203ENST00000528433 NESP48681 1621 aa23.7■■□□□ 1.38
RPL38-203ENST00000528433 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
RPL38-203ENST00000528433 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
RPL38-203ENST00000528433 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
RPL38-203ENST00000528433 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
RPL38-203ENST00000528433 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
RPL38-203ENST00000528433 CFTRP13569 1480 aa23.34■■□□□ 1.33
RPL38-203ENST00000528433 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
RPL38-203ENST00000528433 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
RPL38-203ENST00000528433 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
RPL38-203ENST00000528433 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
RPL38-203ENST00000528433 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
RPL38-203ENST00000528433 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
RPL38-203ENST00000528433 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
RPL38-203ENST00000528433 CUX2O14529 1486 aa23.08■■□□□ 1.29
RPL38-203ENST00000528433 URB2Q14146 1524 aaKnown RBP23.04■■□□□ 1.28
RPL38-203ENST00000528433 WDR62O43379 1518 aa23.03■■□□□ 1.28
RPL38-203ENST00000528433 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
RPL38-203ENST00000528433 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
RPL38-203ENST00000528433 CUX1P39880 1505 aa22.78■■□□□ 1.24
RPL38-203ENST00000528433 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
RPL38-203ENST00000528433 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
RPL38-203ENST00000528433 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
RPL38-203ENST00000528433 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
RPL38-203ENST00000528433 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
RPL38-203ENST00000528433 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
RPL38-203ENST00000528433 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
RPL38-203ENST00000528433 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
RPL38-203ENST00000528433 WRNQ14191 1432 aaPredicted RBP eCLIP22.59■■□□□ 1.21
RPL38-203ENST00000528433 SOGA1O94964 1423 aa22.57■■□□□ 1.2
RPL38-203ENST00000528433 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.22e-8■■■■■ 42.3
RPL38-203ENST00000528433 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
RPL38-203ENST00000528433 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
RPL38-203ENST00000528433 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
RPL38-203ENST00000528433 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
RPL38-203ENST00000528433 WDR97A6NE52 1622 aa22.44■■□□□ 1.18
RPL38-203ENST00000528433 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
RPL38-203ENST00000528433 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
RPL38-203ENST00000528433 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
RPL38-203ENST00000528433 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
RPL38-203ENST00000528433 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
RPL38-203ENST00000528433 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
RPL38-203ENST00000528433 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
RPL38-203ENST00000528433 CHD1O14646 1710 aa22.22■■□□□ 1.15
RPL38-203ENST00000528433 FBLN2P98095 1184 aa22.21■■□□□ 1.15
RPL38-203ENST00000528433 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
RPL38-203ENST00000528433 OSCARQ8IYS5 282 aa22.16■■□□□ 1.14
RPL38-203ENST00000528433 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
RPL38-203ENST00000528433 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
RPL38-203ENST00000528433 ADAMTS12P58397 1594 aa22.11■■□□□ 1.13
RPL38-203ENST00000528433 RUSC2Q8N2Y8 1516 aa22.1■■□□□ 1.13
RPL38-203ENST00000528433 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
RPL38-203ENST00000528433 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
RPL38-203ENST00000528433 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
RPL38-203ENST00000528433 IGF1RP08069 1367 aa22.05■■□□□ 1.12
RPL38-203ENST00000528433 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
RPL38-203ENST00000528433 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
RPL38-203ENST00000528433 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
RPL38-203ENST00000528433 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
RPL38-203ENST00000528433 CEP170Q5SW79 1584 aa21.95■■□□□ 1.11
RPL38-203ENST00000528433 NUP160Q12769 1436 aa21.9■■□□□ 1.1
RPL38-203ENST00000528433 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.09
RPL38-203ENST00000528433 RIMBP3BA6NNM3 1639 aa21.89■■□□□ 1.09
RPL38-203ENST00000528433 RIMBP3Q9UFD9 1639 aa21.89■■□□□ 1.09
RPL38-203ENST00000528433 CUL7Q14999 1698 aa21.88■■□□□ 1.09
RPL38-203ENST00000528433 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
RPL38-203ENST00000528433 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
RPL38-203ENST00000528433 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
RPL38-203ENST00000528433 ERCC6L2Q5T890 1561 aa21.81■■□□□ 1.08
RPL38-203ENST00000528433 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms