RNA–Protein interactions for RNA: ENST00000482455.5

CALM3-204, Transcript of calmodulin 3, humanhuman

TSL 4

Gene CALM3, Length 650 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-204ENST00000482455 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
CALM3-204ENST00000482455 ABCC9O60706 1549 aa18.4■□□□□ 0.54
CALM3-204ENST00000482455 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
CALM3-204ENST00000482455 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
CALM3-204ENST00000482455 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
CALM3-204ENST00000482455 NACADO15069 1562 aa17.21■□□□□ 0.35
CALM3-204ENST00000482455 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
CALM3-204ENST00000482455 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
CALM3-204ENST00000482455 DCAF8L2P0C7V8 631 aa17.02■□□□□ 0.32
CALM3-204ENST00000482455 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
CALM3-204ENST00000482455 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
CALM3-204ENST00000482455 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
CALM3-204ENST00000482455 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
CALM3-204ENST00000482455 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
CALM3-204ENST00000482455 DCAF1Q9Y4B6 1507 aa16.62■□□□□ 0.25
CALM3-204ENST00000482455 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
CALM3-204ENST00000482455 CECR2Q9BXF3 1484 aa16.56■□□□□ 0.24
CALM3-204ENST00000482455 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
CALM3-204ENST00000482455 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
CALM3-204ENST00000482455 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
CALM3-204ENST00000482455 CUX2O14529 1486 aa15.87■□□□□ 0.13
CALM3-204ENST00000482455 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
CALM3-204ENST00000482455 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
CALM3-204ENST00000482455 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
CALM3-204ENST00000482455 NESP48681 1621 aa15.79■□□□□ 0.12
CALM3-204ENST00000482455 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
CALM3-204ENST00000482455 SMARCA2P51531 1590 aa15.76■□□□□ 0.11
CALM3-204ENST00000482455 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
CALM3-204ENST00000482455 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
CALM3-204ENST00000482455 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
CALM3-204ENST00000482455 PEG3Q9GZU2 1588 aa15.64■□□□□ 0.09
CALM3-204ENST00000482455 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
CALM3-204ENST00000482455 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
CALM3-204ENST00000482455 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
CALM3-204ENST00000482455 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
CALM3-204ENST00000482455 WIZO95785 1651 aa15.42■□□□□ 0.06
CALM3-204ENST00000482455 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
CALM3-204ENST00000482455 WDR62O43379 1518 aa15.38■□□□□ 0.05
CALM3-204ENST00000482455 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
CALM3-204ENST00000482455 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
CALM3-204ENST00000482455 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.04
CALM3-204ENST00000482455 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
CALM3-204ENST00000482455 CFTRP13569 1480 aa15.19■□□□□ 0.02
CALM3-204ENST00000482455 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
CALM3-204ENST00000482455 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
CALM3-204ENST00000482455 RSF1Q96T23 1441 aaPredicted RBP15.15■□□□□ 0.02
CALM3-204ENST00000482455 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
CALM3-204ENST00000482455 OSCARQ8IYS5 282 aa15.04■□□□□ -0
CALM3-204ENST00000482455 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
CALM3-204ENST00000482455 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
CALM3-204ENST00000482455 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
CALM3-204ENST00000482455 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
CALM3-204ENST00000482455 CCDC88BA6NC98 1476 aa14.97□□□□□ -0.01
CALM3-204ENST00000482455 EIF4G3O43432 1585 aaKnown RBP14.96□□□□□ -0.01
CALM3-204ENST00000482455 TOPBP1Q92547 1522 aa14.96□□□□□ -0.02
CALM3-204ENST00000482455 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
CALM3-204ENST00000482455 ARHGEF11O15085 1522 aa14.93□□□□□ -0.02
CALM3-204ENST00000482455 CHD1O14646 1710 aa14.91□□□□□ -0.02
CALM3-204ENST00000482455 DNMBPQ6XZF7 1577 aa14.89□□□□□ -0.03
CALM3-204ENST00000482455 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
CALM3-204ENST00000482455 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.042e-10■■□□□ 12.3
CALM3-204ENST00000482455 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
CALM3-204ENST00000482455 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
CALM3-204ENST00000482455 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
CALM3-204ENST00000482455 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
CALM3-204ENST00000482455 CYB5RLQ6IPT4 315 aa14.75□□□□□ -0.05
CALM3-204ENST00000482455 FBLN2P98095 1184 aa14.7□□□□□ -0.06
CALM3-204ENST00000482455 CLASP1Q7Z460 1538 aa14.69□□□□□ -0.06
CALM3-204ENST00000482455 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
CALM3-204ENST00000482455 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
CALM3-204ENST00000482455 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
CALM3-204ENST00000482455 CUX1P39880 1505 aa14.66□□□□□ -0.06
CALM3-204ENST00000482455 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
CALM3-204ENST00000482455 SOGA1O94964 1423 aa14.66□□□□□ -0.06
CALM3-204ENST00000482455 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
CALM3-204ENST00000482455 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
CALM3-204ENST00000482455 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
CALM3-204ENST00000482455 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
CALM3-204ENST00000482455 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
CALM3-204ENST00000482455 SYNJ2O15056 1496 aa14.56□□□□□ -0.08
CALM3-204ENST00000482455 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
CALM3-204ENST00000482455 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
CALM3-204ENST00000482455 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
CALM3-204ENST00000482455 ERCC6L2Q5T890 1561 aa14.49□□□□□ -0.09
CALM3-204ENST00000482455 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
CALM3-204ENST00000482455 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
CALM3-204ENST00000482455 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
CALM3-204ENST00000482455 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
CALM3-204ENST00000482455 BIVM-ERCC5R4GMW8 1640 aa14.38□□□□□ -0.11
CALM3-204ENST00000482455 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
CALM3-204ENST00000482455 NUP160Q12769 1436 aa14.37□□□□□ -0.11
CALM3-204ENST00000482455 TOP2BQ02880 1626 aa14.35□□□□□ -0.11
CALM3-204ENST00000482455 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.11
CALM3-204ENST00000482455 KIF13AQ9H1H9 1805 aa14.33□□□□□ -0.12
CALM3-204ENST00000482455 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
CALM3-204ENST00000482455 AEBP2Q6ZN18 517 aaPredicted RBP14.3□□□□□ -0.12
CALM3-204ENST00000482455 FHAD1B1AJZ9 1412 aa14.29□□□□□ -0.12
CALM3-204ENST00000482455 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
CALM3-204ENST00000482455 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
CALM3-204ENST00000482455 PRG4Q92954 1404 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms