RNA–Protein interactions for RNA: ENST00000439590.6

RPL38-202, Transcript of ribosomal protein L38, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RPL38, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-202ENST00000439590 NISCHQ9Y2I1 1504 aa31.67■■■□□ 2.66
RPL38-202ENST00000439590 ABCC9O60706 1549 aa28.23■■■□□ 2.11
RPL38-202ENST00000439590 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
RPL38-202ENST00000439590 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
RPL38-202ENST00000439590 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
RPL38-202ENST00000439590 NACADO15069 1562 aa26.66■■□□□ 1.86
RPL38-202ENST00000439590 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
RPL38-202ENST00000439590 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
RPL38-202ENST00000439590 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
RPL38-202ENST00000439590 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
RPL38-202ENST00000439590 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
RPL38-202ENST00000439590 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
RPL38-202ENST00000439590 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
RPL38-202ENST00000439590 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
RPL38-202ENST00000439590 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
RPL38-202ENST00000439590 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
RPL38-202ENST00000439590 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
RPL38-202ENST00000439590 CECR2Q9BXF3 1484 aa25.36■■□□□ 1.65
RPL38-202ENST00000439590 NCAPD3P42695 1498 aa24.7■■□□□ 1.55
RPL38-202ENST00000439590 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
RPL38-202ENST00000439590 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
RPL38-202ENST00000439590 BAZ1AQ9NRL2 1556 aaPredicted RBP24.48■■□□□ 1.51
RPL38-202ENST00000439590 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
RPL38-202ENST00000439590 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
RPL38-202ENST00000439590 HMGXB3Q12766 1538 aa24.44■■□□□ 1.5
RPL38-202ENST00000439590 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
RPL38-202ENST00000439590 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
RPL38-202ENST00000439590 NESP48681 1621 aa24.35■■□□□ 1.49
RPL38-202ENST00000439590 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
RPL38-202ENST00000439590 WIZO95785 1651 aa24.15■■□□□ 1.46
RPL38-202ENST00000439590 CUX2O14529 1486 aa24.13■■□□□ 1.45
RPL38-202ENST00000439590 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
RPL38-202ENST00000439590 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
RPL38-202ENST00000439590 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
RPL38-202ENST00000439590 CADPSQ9ULU8 1353 aa23.97■■□□□ 1.43
RPL38-202ENST00000439590 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
RPL38-202ENST00000439590 KIF21AQ7Z4S6 1674 aa23.91■■□□□ 1.42
RPL38-202ENST00000439590 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
RPL38-202ENST00000439590 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
RPL38-202ENST00000439590 CFTRP13569 1480 aa23.72■■□□□ 1.39
RPL38-202ENST00000439590 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
RPL38-202ENST00000439590 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
RPL38-202ENST00000439590 WDR62O43379 1518 aa23.65■■□□□ 1.38
RPL38-202ENST00000439590 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
RPL38-202ENST00000439590 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
RPL38-202ENST00000439590 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
RPL38-202ENST00000439590 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
RPL38-202ENST00000439590 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
RPL38-202ENST00000439590 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
RPL38-202ENST00000439590 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
RPL38-202ENST00000439590 OSCARQ8IYS5 282 aa23.14■■□□□ 1.29
RPL38-202ENST00000439590 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
RPL38-202ENST00000439590 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
RPL38-202ENST00000439590 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
RPL38-202ENST00000439590 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
RPL38-202ENST00000439590 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.282e-7■■■■■ 32.3
RPL38-202ENST00000439590 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
RPL38-202ENST00000439590 POLA1P09884 1462 aaPredicted RBP23.04■■□□□ 1.28
RPL38-202ENST00000439590 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
RPL38-202ENST00000439590 EIF4G3O43432 1585 aaKnown RBP22.99■■□□□ 1.27
RPL38-202ENST00000439590 CUX1P39880 1505 aa22.96■■□□□ 1.27
RPL38-202ENST00000439590 SOGA1O94964 1423 aa22.94■■□□□ 1.26
RPL38-202ENST00000439590 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
RPL38-202ENST00000439590 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
RPL38-202ENST00000439590 RIMBP3CA6NJZ7 1639 aa22.8■■□□□ 1.24
RPL38-202ENST00000439590 RIMBP3BA6NNM3 1639 aa22.8■■□□□ 1.24
RPL38-202ENST00000439590 RIMBP3Q9UFD9 1639 aa22.8■■□□□ 1.24
RPL38-202ENST00000439590 FBLN2P98095 1184 aa22.8■■□□□ 1.24
RPL38-202ENST00000439590 CHD1O14646 1710 aa22.77■■□□□ 1.24
RPL38-202ENST00000439590 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
RPL38-202ENST00000439590 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
RPL38-202ENST00000439590 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
RPL38-202ENST00000439590 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
RPL38-202ENST00000439590 CYB5RLQ6IPT4 315 aa22.65■■□□□ 1.22
RPL38-202ENST00000439590 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
RPL38-202ENST00000439590 GAPVD1Q14C86 1478 aa22.63■■□□□ 1.21
RPL38-202ENST00000439590 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
RPL38-202ENST00000439590 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
RPL38-202ENST00000439590 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
RPL38-202ENST00000439590 ARAP1Q96P48 1450 aa22.58■■□□□ 1.2
RPL38-202ENST00000439590 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
RPL38-202ENST00000439590 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
RPL38-202ENST00000439590 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
RPL38-202ENST00000439590 SYNJ2O15056 1496 aa22.56■■□□□ 1.2
RPL38-202ENST00000439590 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
RPL38-202ENST00000439590 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
RPL38-202ENST00000439590 PBRM1Q86U86 1689 aa22.53■■□□□ 1.2
RPL38-202ENST00000439590 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
RPL38-202ENST00000439590 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
RPL38-202ENST00000439590 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
RPL38-202ENST00000439590 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
RPL38-202ENST00000439590 NUP160Q12769 1436 aa22.34■■□□□ 1.17
RPL38-202ENST00000439590 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.17
RPL38-202ENST00000439590 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
RPL38-202ENST00000439590 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
RPL38-202ENST00000439590 IGF1RP08069 1367 aa22.22■■□□□ 1.15
RPL38-202ENST00000439590 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
RPL38-202ENST00000439590 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
RPL38-202ENST00000439590 PRG4Q92954 1404 aaPredicted RBP22.11■■□□□ 1.13
RPL38-202ENST00000439590 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms