RNA–Protein interactions for RNA: ENST00000392108.7

AFDN-205, Transcript of afadin, adherens junction formation factor, humanhuman

TSL 1 (best) BASIC

Gene AFDN, Length 6,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFDN-205ENST00000392108 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
AFDN-205ENST00000392108 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
AFDN-205ENST00000392108 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
AFDN-205ENST00000392108 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
AFDN-205ENST00000392108 EHMT2Q96KQ7 1210 aa23.96■■□□□ 1.43
AFDN-205ENST00000392108 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
AFDN-205ENST00000392108 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
AFDN-205ENST00000392108 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
AFDN-205ENST00000392108 PCGF6Q9BYE7 350 aa22.71■■□□□ 1.23
AFDN-205ENST00000392108 APLP2Q06481 763 aa22.57■■□□□ 1.2
AFDN-205ENST00000392108 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
AFDN-205ENST00000392108 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
AFDN-205ENST00000392108 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
AFDN-205ENST00000392108 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
AFDN-205ENST00000392108 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
AFDN-205ENST00000392108 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
AFDN-205ENST00000392108 PELP1Q8IZL8 1130 aaKnown RBP21.76■■□□□ 1.07
AFDN-205ENST00000392108 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
AFDN-205ENST00000392108 ITGAEP38570 1179 aa21.65■■□□□ 1.06
AFDN-205ENST00000392108 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
AFDN-205ENST00000392108 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
AFDN-205ENST00000392108 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
AFDN-205ENST00000392108 ABCC9O60706 1549 aa21.52■■□□□ 1.04
AFDN-205ENST00000392108 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
AFDN-205ENST00000392108 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
AFDN-205ENST00000392108 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
AFDN-205ENST00000392108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.4■■□□□ 1.02
AFDN-205ENST00000392108 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
AFDN-205ENST00000392108 HRCP23327 699 aa21.27■■□□□ 1
AFDN-205ENST00000392108 POLR3GLQ9BT43 218 aa21.27■■□□□ 1
AFDN-205ENST00000392108 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
AFDN-205ENST00000392108 ERICH6Q7L0X2 663 aa21.18■□□□□ 0.98
AFDN-205ENST00000392108 NEFLP07196 543 aa21.07■□□□□ 0.96
AFDN-205ENST00000392108 FAM50AQ14320 339 aaKnown RBP20.96■□□□□ 0.95
AFDN-205ENST00000392108 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
AFDN-205ENST00000392108 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
AFDN-205ENST00000392108 P3H3Q8IVL6 736 aa20.79■□□□□ 0.92
AFDN-205ENST00000392108 FBLN2P98095 1184 aa20.77■□□□□ 0.92
AFDN-205ENST00000392108 DIEXFQ68CQ4 756 aaKnown RBP20.77■□□□□ 0.92
AFDN-205ENST00000392108 SLC4A1APQ9BWU0 796 aaKnown RBP20.76■□□□□ 0.91
AFDN-205ENST00000392108 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
AFDN-205ENST00000392108 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
AFDN-205ENST00000392108 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
AFDN-205ENST00000392108 BCANQ96GW7 911 aa20.49■□□□□ 0.87
AFDN-205ENST00000392108 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
AFDN-205ENST00000392108 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
AFDN-205ENST00000392108 ZNF777Q9ULD5 760 aaPredicted RBP20.36■□□□□ 0.85
AFDN-205ENST00000392108 DAXXQ9UER7 740 aaPredicted RBP20.35■□□□□ 0.85
AFDN-205ENST00000392108 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
AFDN-205ENST00000392108 MYT1Q01538 1121 aa20.28■□□□□ 0.84
AFDN-205ENST00000392108 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
AFDN-205ENST00000392108 ANP32CO43423 234 aa20.22■□□□□ 0.83
AFDN-205ENST00000392108 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
AFDN-205ENST00000392108 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
AFDN-205ENST00000392108 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
AFDN-205ENST00000392108 CHIC2Q9UKJ5 165 aa20.1■□□□□ 0.81
AFDN-205ENST00000392108 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
AFDN-205ENST00000392108 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
AFDN-205ENST00000392108 SLC24A1O60721 1099 aa20.02■□□□□ 0.8
AFDN-205ENST00000392108 HIRIP3Q9BW71 556 aaPredicted RBP20■□□□□ 0.79
AFDN-205ENST00000392108 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
AFDN-205ENST00000392108 DDX10Q13206 875 aaKnown RBP19.96■□□□□ 0.79
AFDN-205ENST00000392108 CHGAP10645 457 aaKnown RBP19.95■□□□□ 0.78
AFDN-205ENST00000392108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.785e-9■■□□□ 13.1
AFDN-205ENST00000392108 SALL2Q9Y467 1007 aaPredicted RBP19.92■□□□□ 0.78
AFDN-205ENST00000392108 ACIN1Q9UKV3 1341 aaKnown RBP19.92■□□□□ 0.78
AFDN-205ENST00000392108 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
AFDN-205ENST00000392108 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
AFDN-205ENST00000392108 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
AFDN-205ENST00000392108 TONSLQ96HA7 1378 aa19.86■□□□□ 0.77
AFDN-205ENST00000392108 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
AFDN-205ENST00000392108 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
AFDN-205ENST00000392108 RTL5Q5HYW3 569 aaPredicted RBP19.83■□□□□ 0.77
AFDN-205ENST00000392108 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
AFDN-205ENST00000392108 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
AFDN-205ENST00000392108 FKBP8Q14318 412 aa19.78■□□□□ 0.76
AFDN-205ENST00000392108 SENP3-EIF4A1A0A087X0R7 540 aa19.78■□□□□ 0.76
AFDN-205ENST00000392108 RRP7BPQ9NSQ0 103 aa19.78■□□□□ 0.76
AFDN-205ENST00000392108 CLIP1P30622 1438 aa19.76■□□□□ 0.75
AFDN-205ENST00000392108 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
AFDN-205ENST00000392108 CHMP7Q8WUX9 453 aaPredicted RBP19.75■□□□□ 0.75
AFDN-205ENST00000392108 NPM2Q86SE8 214 aaKnown RBP19.73■□□□□ 0.75
AFDN-205ENST00000392108 MTUS2Q5JR59 1369 aa19.72■□□□□ 0.75
AFDN-205ENST00000392108 STAG3Q9UJ98 1225 aa19.72■□□□□ 0.75
AFDN-205ENST00000392108 MIER1Q8N108 512 aa19.71■□□□□ 0.75
AFDN-205ENST00000392108 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
AFDN-205ENST00000392108 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
AFDN-205ENST00000392108 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
AFDN-205ENST00000392108 IRX6P78412 446 aaPredicted RBP19.67■□□□□ 0.74
AFDN-205ENST00000392108 ESF1Q9H501 851 aaKnown RBP19.65■□□□□ 0.74
AFDN-205ENST00000392108 ZBTB47Q9UFB7 747 aaPredicted RBP19.65■□□□□ 0.74
AFDN-205ENST00000392108 NPM1P06748 294 aaKnown RBP eCLIP19.64■□□□□ 0.73
AFDN-205ENST00000392108 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
AFDN-205ENST00000392108 NEFMP07197 916 aa19.6■□□□□ 0.73
AFDN-205ENST00000392108 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.733e-7■■■■□ 25.1
AFDN-205ENST00000392108 PLEKHG5O94827 1062 aa19.59■□□□□ 0.73
AFDN-205ENST00000392108 TSPY4P0CV99 314 aa19.58■□□□□ 0.72
AFDN-205ENST00000392108 TSPY10P0CW01 314 aa19.58■□□□□ 0.72
AFDN-205ENST00000392108 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
AFDN-205ENST00000392108 RGL3Q3MIN7 710 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms