RNA–Protein interactions for RNA: ENST00000510173.6

RBM4-208, Transcript of RNA binding motif protein 4, humanhuman

TSL 3

Gene RBM4, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-208ENST00000510173 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.29
RBM4-208ENST00000510173 CCDC180Q9P1Z9 1646 aa31.92■■■□□ 2.7
RBM4-208ENST00000510173 ABCC9O60706 1549 aa31.78■■■□□ 2.68
RBM4-208ENST00000510173 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
RBM4-208ENST00000510173 NACADO15069 1562 aa30.19■■■□□ 2.42
RBM4-208ENST00000510173 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
RBM4-208ENST00000510173 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
RBM4-208ENST00000510173 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.34
RBM4-208ENST00000510173 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
RBM4-208ENST00000510173 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
RBM4-208ENST00000510173 UNC13AQ9UPW8 1703 aa29.49■■■□□ 2.31
RBM4-208ENST00000510173 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
RBM4-208ENST00000510173 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
RBM4-208ENST00000510173 SHROOM4Q9ULL8 1493 aa29.21■■■□□ 2.27
RBM4-208ENST00000510173 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
RBM4-208ENST00000510173 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
RBM4-208ENST00000510173 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
RBM4-208ENST00000510173 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
RBM4-208ENST00000510173 NCAPD3P42695 1498 aa27.86■■■□□ 2.05
RBM4-208ENST00000510173 ATAD2BQ9ULI0 1458 aa27.75■■■□□ 2.03
RBM4-208ENST00000510173 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
RBM4-208ENST00000510173 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
RBM4-208ENST00000510173 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
RBM4-208ENST00000510173 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
RBM4-208ENST00000510173 ERCC6Q03468 1493 aa27.53■■■□□ 2
RBM4-208ENST00000510173 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
RBM4-208ENST00000510173 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
RBM4-208ENST00000510173 CUX2O14529 1486 aa27.48■■□□□ 1.99
RBM4-208ENST00000510173 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
RBM4-208ENST00000510173 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
RBM4-208ENST00000510173 NESP48681 1621 aa27.28■■□□□ 1.96
RBM4-208ENST00000510173 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
RBM4-208ENST00000510173 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
RBM4-208ENST00000510173 THOC2Q8NI27 1593 aaKnown RBP27.04■■□□□ 1.92
RBM4-208ENST00000510173 CADPSQ9ULU8 1353 aa27.01■■□□□ 1.91
RBM4-208ENST00000510173 WIZO95785 1651 aa26.99■■□□□ 1.91
RBM4-208ENST00000510173 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
RBM4-208ENST00000510173 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
RBM4-208ENST00000510173 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
RBM4-208ENST00000510173 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
RBM4-208ENST00000510173 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
RBM4-208ENST00000510173 WDR62O43379 1518 aa26.74■■□□□ 1.87
RBM4-208ENST00000510173 CFTRP13569 1480 aa26.71■■□□□ 1.87
RBM4-208ENST00000510173 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
RBM4-208ENST00000510173 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
RBM4-208ENST00000510173 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
RBM4-208ENST00000510173 PRDM2Q13029 1718 aa26.38■■□□□ 1.81
RBM4-208ENST00000510173 ABCC8Q09428 1581 aa26.22■■□□□ 1.79
RBM4-208ENST00000510173 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
RBM4-208ENST00000510173 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
RBM4-208ENST00000510173 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
RBM4-208ENST00000510173 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
RBM4-208ENST00000510173 TRIM41Q8WV44 630 aa26.1■■□□□ 1.77
RBM4-208ENST00000510173 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
RBM4-208ENST00000510173 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
RBM4-208ENST00000510173 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
RBM4-208ENST00000510173 TARBP1Q13395 1621 aaKnown RBP25.9■■□□□ 1.74
RBM4-208ENST00000510173 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.732e-7■□□□□ 11.3
RBM4-208ENST00000510173 SOGA1O94964 1423 aa25.81■■□□□ 1.72
RBM4-208ENST00000510173 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
RBM4-208ENST00000510173 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
RBM4-208ENST00000510173 RIMBP3CA6NJZ7 1639 aa25.77■■□□□ 1.72
RBM4-208ENST00000510173 RIMBP3BA6NNM3 1639 aa25.77■■□□□ 1.72
RBM4-208ENST00000510173 RIMBP3Q9UFD9 1639 aa25.77■■□□□ 1.72
RBM4-208ENST00000510173 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
RBM4-208ENST00000510173 ARHGEF11O15085 1522 aa25.74■■□□□ 1.71
RBM4-208ENST00000510173 CUX1P39880 1505 aa25.72■■□□□ 1.71
RBM4-208ENST00000510173 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
RBM4-208ENST00000510173 FBLN2P98095 1184 aa25.7■■□□□ 1.7
RBM4-208ENST00000510173 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
RBM4-208ENST00000510173 CHD1O14646 1710 aa25.68■■□□□ 1.7
RBM4-208ENST00000510173 SNAPC4Q5SXM2 1469 aa25.63■■□□□ 1.69
RBM4-208ENST00000510173 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
RBM4-208ENST00000510173 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
RBM4-208ENST00000510173 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
RBM4-208ENST00000510173 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
RBM4-208ENST00000510173 SYNJ2O15056 1496 aa25.52■■□□□ 1.68
RBM4-208ENST00000510173 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
RBM4-208ENST00000510173 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
RBM4-208ENST00000510173 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
RBM4-208ENST00000510173 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
RBM4-208ENST00000510173 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
RBM4-208ENST00000510173 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
RBM4-208ENST00000510173 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
RBM4-208ENST00000510173 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
RBM4-208ENST00000510173 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
RBM4-208ENST00000510173 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
RBM4-208ENST00000510173 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
RBM4-208ENST00000510173 GRIN2AQ12879 1464 aa25.26■■□□□ 1.63
RBM4-208ENST00000510173 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
RBM4-208ENST00000510173 FHAD1B1AJZ9 1412 aa25.22■■□□□ 1.63
RBM4-208ENST00000510173 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
RBM4-208ENST00000510173 NUP160Q12769 1436 aa25.18■■□□□ 1.62
RBM4-208ENST00000510173 CEP170Q5SW79 1584 aa25.11■■□□□ 1.61
RBM4-208ENST00000510173 SHROOM2Q13796 1616 aa25.01■■□□□ 1.59
RBM4-208ENST00000510173 ERCC6L2Q5T890 1561 aa24.98■■□□□ 1.59
RBM4-208ENST00000510173 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
RBM4-208ENST00000510173 PRG4Q92954 1404 aaPredicted RBP24.92■■□□□ 1.58
RBM4-208ENST00000510173 JPH4Q96JJ6 628 aa24.9■■□□□ 1.58
RBM4-208ENST00000510173 RUSC2Q8N2Y8 1516 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms