RNA–Protein interactions for RNA: ENST00000408993.6

RBM4-204, Transcript of RNA binding motif protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RBM4, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-204ENST00000408993 NISCHQ9Y2I1 1504 aa38.52■■■■□ 3.76
RBM4-204ENST00000408993 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
RBM4-204ENST00000408993 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
RBM4-204ENST00000408993 ABCC9O60706 1549 aa32.15■■■□□ 2.74
RBM4-204ENST00000408993 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
RBM4-204ENST00000408993 DCAF8L2P0C7V8 631 aa31.84■■■□□ 2.69
RBM4-204ENST00000408993 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
RBM4-204ENST00000408993 NACADO15069 1562 aa31.51■■■□□ 2.63
RBM4-204ENST00000408993 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
RBM4-204ENST00000408993 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
RBM4-204ENST00000408993 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
RBM4-204ENST00000408993 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
RBM4-204ENST00000408993 BICRAQ9NZM4 1560 aa30.37■■■□□ 2.45
RBM4-204ENST00000408993 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
RBM4-204ENST00000408993 CECR2Q9BXF3 1484 aa29.94■■■□□ 2.38
RBM4-204ENST00000408993 SUPT5HO00267 1087 aaKnown RBP29.78■■■□□ 2.36
RBM4-204ENST00000408993 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
RBM4-204ENST00000408993 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
RBM4-204ENST00000408993 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
RBM4-204ENST00000408993 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
RBM4-204ENST00000408993 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
RBM4-204ENST00000408993 WIZO95785 1651 aa29.45■■■□□ 2.3
RBM4-204ENST00000408993 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
RBM4-204ENST00000408993 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
RBM4-204ENST00000408993 SMARCA2P51531 1590 aa29.24■■■□□ 2.27
RBM4-204ENST00000408993 TOP2AP11388 1531 aaKnown RBP29.16■■■□□ 2.26
RBM4-204ENST00000408993 CC2D2AQ9P2K1 1620 aa29.11■■■□□ 2.25
RBM4-204ENST00000408993 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
RBM4-204ENST00000408993 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
RBM4-204ENST00000408993 HMGXB3Q12766 1538 aa29.02■■■□□ 2.24
RBM4-204ENST00000408993 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
RBM4-204ENST00000408993 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
RBM4-204ENST00000408993 CHIC1Q5VXU3 224 aa28.39■■■□□ 2.13
RBM4-204ENST00000408993 CFTRP13569 1480 aa28.36■■■□□ 2.13
RBM4-204ENST00000408993 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
RBM4-204ENST00000408993 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
RBM4-204ENST00000408993 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
RBM4-204ENST00000408993 NESP48681 1621 aa28.13■■■□□ 2.09
RBM4-204ENST00000408993 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
RBM4-204ENST00000408993 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
RBM4-204ENST00000408993 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
RBM4-204ENST00000408993 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
RBM4-204ENST00000408993 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
RBM4-204ENST00000408993 SYNJ1O43426 1573 aa27.89■■■□□ 2.05
RBM4-204ENST00000408993 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.05
RBM4-204ENST00000408993 TOP2BQ02880 1626 aa27.82■■■□□ 2.04
RBM4-204ENST00000408993 CUX1P39880 1505 aa27.82■■■□□ 2.04
RBM4-204ENST00000408993 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
RBM4-204ENST00000408993 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
RBM4-204ENST00000408993 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
RBM4-204ENST00000408993 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
RBM4-204ENST00000408993 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
RBM4-204ENST00000408993 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
RBM4-204ENST00000408993 MRC2Q9UBG0 1479 aa27.58■■■□□ 2.01
RBM4-204ENST00000408993 FGD5Q6ZNL6 1462 aa27.56■■■□□ 2
RBM4-204ENST00000408993 SOGA1O94964 1423 aa27.54■■■□□ 2
RBM4-204ENST00000408993 POLA1P09884 1462 aaPredicted RBP27.49■■□□□ 1.99
RBM4-204ENST00000408993 FAM9AQ8IZU1 332 aaPredicted RBP27.48■■□□□ 1.99
RBM4-204ENST00000408993 WDR62O43379 1518 aa27.46■■□□□ 1.99
RBM4-204ENST00000408993 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.99
RBM4-204ENST00000408993 EEA1Q15075 1411 aa27.45■■□□□ 1.98
RBM4-204ENST00000408993 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
RBM4-204ENST00000408993 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
RBM4-204ENST00000408993 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
RBM4-204ENST00000408993 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
RBM4-204ENST00000408993 CSRNP3Q8WYN3 585 aa27.32■■□□□ 1.96
RBM4-204ENST00000408993 CUX2O14529 1486 aa27.31■■□□□ 1.96
RBM4-204ENST00000408993 TARBP1Q13395 1621 aaKnown RBP27.27■■□□□ 1.96
RBM4-204ENST00000408993 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
RBM4-204ENST00000408993 LOC105371045A0A1W2PR82 267 aa27.25■■□□□ 1.95
RBM4-204ENST00000408993 IFT140Q96RY7 1462 aa27.2■■□□□ 1.95
RBM4-204ENST00000408993 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
RBM4-204ENST00000408993 IGF1RP08069 1367 aa27.14■■□□□ 1.93
RBM4-204ENST00000408993 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
RBM4-204ENST00000408993 KIF21BO75037 1637 aa27.09■■□□□ 1.93
RBM4-204ENST00000408993 GAPVD1Q14C86 1478 aa27.08■■□□□ 1.93
RBM4-204ENST00000408993 PRXQ9BXM0 1461 aa27.08■■□□□ 1.93
RBM4-204ENST00000408993 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
RBM4-204ENST00000408993 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
RBM4-204ENST00000408993 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.923e-7■■□□□ 13.9
RBM4-204ENST00000408993 GOLGA3Q08378 1498 aa27.03■■□□□ 1.92
RBM4-204ENST00000408993 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.91
RBM4-204ENST00000408993 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
RBM4-204ENST00000408993 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
RBM4-204ENST00000408993 EIF4G3O43432 1585 aaKnown RBP26.94■■□□□ 1.9
RBM4-204ENST00000408993 CUL7Q14999 1698 aa26.93■■□□□ 1.9
RBM4-204ENST00000408993 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
RBM4-204ENST00000408993 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
RBM4-204ENST00000408993 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
RBM4-204ENST00000408993 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
RBM4-204ENST00000408993 FHAD1B1AJZ9 1412 aa26.79■■□□□ 1.88
RBM4-204ENST00000408993 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
RBM4-204ENST00000408993 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
RBM4-204ENST00000408993 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
RBM4-204ENST00000408993 CEP162Q5TB80 1403 aa26.7■■□□□ 1.87
RBM4-204ENST00000408993 SYNJ2O15056 1496 aa26.64■■□□□ 1.86
RBM4-204ENST00000408993 GRIN2AQ12879 1464 aa26.59■■□□□ 1.85
RBM4-204ENST00000408993 CLIP1P30622 1438 aa26.58■■□□□ 1.85
RBM4-204ENST00000408993 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
RBM4-204ENST00000408993 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms