RNA–Protein interactions for RNA: ENST00000533540.5

HSPA8-221, Transcript of heat shock protein family A (Hsp70) member 8, humanhuman

TSL 5 BASIC

Gene HSPA8, Length 1,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA8-221ENST00000533540 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
HSPA8-221ENST00000533540 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
HSPA8-221ENST00000533540 ABCC9O60706 1549 aa27.07■■□□□ 1.92
HSPA8-221ENST00000533540 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
HSPA8-221ENST00000533540 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.88
HSPA8-221ENST00000533540 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
HSPA8-221ENST00000533540 NACADO15069 1562 aa26.24■■□□□ 1.79
HSPA8-221ENST00000533540 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
HSPA8-221ENST00000533540 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
HSPA8-221ENST00000533540 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
HSPA8-221ENST00000533540 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
HSPA8-221ENST00000533540 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
HSPA8-221ENST00000533540 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
HSPA8-221ENST00000533540 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
HSPA8-221ENST00000533540 CECR2Q9BXF3 1484 aa24.97■■□□□ 1.59
HSPA8-221ENST00000533540 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
HSPA8-221ENST00000533540 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
HSPA8-221ENST00000533540 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
HSPA8-221ENST00000533540 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
HSPA8-221ENST00000533540 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
HSPA8-221ENST00000533540 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
HSPA8-221ENST00000533540 WIZO95785 1651 aa24.56■■□□□ 1.52
HSPA8-221ENST00000533540 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
HSPA8-221ENST00000533540 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
HSPA8-221ENST00000533540 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
HSPA8-221ENST00000533540 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
HSPA8-221ENST00000533540 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
HSPA8-221ENST00000533540 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
HSPA8-221ENST00000533540 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
HSPA8-221ENST00000533540 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
HSPA8-221ENST00000533540 HMGXB3Q12766 1538 aa24.14■■□□□ 1.46
HSPA8-221ENST00000533540 CCDC88BA6NC98 1476 aa24.01■■□□□ 1.43
HSPA8-221ENST00000533540 NESP48681 1621 aa23.63■■□□□ 1.37
HSPA8-221ENST00000533540 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
HSPA8-221ENST00000533540 CFTRP13569 1480 aa23.58■■□□□ 1.37
HSPA8-221ENST00000533540 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
HSPA8-221ENST00000533540 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
HSPA8-221ENST00000533540 ABCC8Q09428 1581 aa23.42■■□□□ 1.34
HSPA8-221ENST00000533540 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
HSPA8-221ENST00000533540 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
HSPA8-221ENST00000533540 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
HSPA8-221ENST00000533540 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
HSPA8-221ENST00000533540 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
HSPA8-221ENST00000533540 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
HSPA8-221ENST00000533540 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.317e-10■■■■■ 33.4
HSPA8-221ENST00000533540 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
HSPA8-221ENST00000533540 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
HSPA8-221ENST00000533540 CUX1P39880 1505 aa23.17■■□□□ 1.3
HSPA8-221ENST00000533540 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
HSPA8-221ENST00000533540 TOP2BQ02880 1626 aa23.08■■□□□ 1.29
HSPA8-221ENST00000533540 MRC2Q9UBG0 1479 aa23.07■■□□□ 1.28
HSPA8-221ENST00000533540 BIVM-ERCC5R4GMW8 1640 aa23.07■■□□□ 1.28
HSPA8-221ENST00000533540 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
HSPA8-221ENST00000533540 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
HSPA8-221ENST00000533540 THOC2Q8NI27 1593 aaKnown RBP23■■□□□ 1.27
HSPA8-221ENST00000533540 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
HSPA8-221ENST00000533540 WDR62O43379 1518 aa22.94■■□□□ 1.26
HSPA8-221ENST00000533540 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
HSPA8-221ENST00000533540 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
HSPA8-221ENST00000533540 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
HSPA8-221ENST00000533540 SOGA1O94964 1423 aa22.87■■□□□ 1.25
HSPA8-221ENST00000533540 RUSC2Q8N2Y8 1516 aa22.84■■□□□ 1.25
HSPA8-221ENST00000533540 CUX2O14529 1486 aa22.81■■□□□ 1.24
HSPA8-221ENST00000533540 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
HSPA8-221ENST00000533540 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
HSPA8-221ENST00000533540 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
HSPA8-221ENST00000533540 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
HSPA8-221ENST00000533540 WDR97A6NE52 1622 aa22.7■■□□□ 1.23
HSPA8-221ENST00000533540 IFT140Q96RY7 1462 aa22.7■■□□□ 1.22
HSPA8-221ENST00000533540 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
HSPA8-221ENST00000533540 ZNF608Q9ULD9 1512 aaPredicted RBP22.67■■□□□ 1.22
HSPA8-221ENST00000533540 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.216e-8■■■■□ 23.2
HSPA8-221ENST00000533540 CSRNP3Q8WYN3 585 aa22.63■■□□□ 1.21
HSPA8-221ENST00000533540 EEA1Q15075 1411 aa22.6■■□□□ 1.21
HSPA8-221ENST00000533540 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
HSPA8-221ENST00000533540 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
HSPA8-221ENST00000533540 ABCA5Q8WWZ7 1642 aa22.58■■□□□ 1.21
HSPA8-221ENST00000533540 EIF4G3O43432 1585 aaKnown RBP22.55■■□□□ 1.2
HSPA8-221ENST00000533540 IGF1RP08069 1367 aa22.54■■□□□ 1.2
HSPA8-221ENST00000533540 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
HSPA8-221ENST00000533540 GRIN2BQ13224 1484 aa22.45■■□□□ 1.18
HSPA8-221ENST00000533540 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
HSPA8-221ENST00000533540 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
HSPA8-221ENST00000533540 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
HSPA8-221ENST00000533540 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
HSPA8-221ENST00000533540 PRXQ9BXM0 1461 aa22.4■■□□□ 1.18
HSPA8-221ENST00000533540 KIF21BO75037 1637 aa22.38■■□□□ 1.17
HSPA8-221ENST00000533540 CUL7Q14999 1698 aa22.37■■□□□ 1.17
HSPA8-221ENST00000533540 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
HSPA8-221ENST00000533540 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
HSPA8-221ENST00000533540 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
HSPA8-221ENST00000533540 FBLN2P98095 1184 aa22.33■■□□□ 1.16
HSPA8-221ENST00000533540 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
HSPA8-221ENST00000533540 MAGI1Q96QZ7 1491 aaPredicted RBP22.29■■□□□ 1.16
HSPA8-221ENST00000533540 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
HSPA8-221ENST00000533540 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
HSPA8-221ENST00000533540 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
HSPA8-221ENST00000533540 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
HSPA8-221ENST00000533540 CHD1O14646 1710 aa22.18■■□□□ 1.14
HSPA8-221ENST00000533540 TNIKQ9UKE5 1360 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms