RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
RPL38-205ENST00000530646 CCDC180Q9P1Z9 1646 aa30.88■■■□□ 2.53
RPL38-205ENST00000530646 HRCP23327 699 aa30.76■■■□□ 2.52
RPL38-205ENST00000530646 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
RPL38-205ENST00000530646 SHROOM4Q9ULL8 1493 aa30.18■■■□□ 2.42
RPL38-205ENST00000530646 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
RPL38-205ENST00000530646 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
RPL38-205ENST00000530646 PPARGC1BQ86YN6 1023 aaKnown RBP30.08■■■□□ 2.41
RPL38-205ENST00000530646 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
RPL38-205ENST00000530646 PELP1Q8IZL8 1130 aaKnown RBP30.02■■■□□ 2.4
RPL38-205ENST00000530646 PCGF6Q9BYE7 350 aa30.02■■■□□ 2.4
RPL38-205ENST00000530646 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
RPL38-205ENST00000530646 ABCC9O60706 1549 aa29.5■■■□□ 2.31
RPL38-205ENST00000530646 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
RPL38-205ENST00000530646 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
RPL38-205ENST00000530646 TRIM26Q12899 539 aaPredicted RBP29.09■■■□□ 2.25
RPL38-205ENST00000530646 LOC105371045A0A1W2PR82 267 aa29.02■■■□□ 2.24
RPL38-205ENST00000530646 MYT1Q01538 1121 aa28.93■■■□□ 2.22
RPL38-205ENST00000530646 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
RPL38-205ENST00000530646 ZEB1P37275 1124 aaPredicted RBP28.87■■■□□ 2.21
RPL38-205ENST00000530646 NACADO15069 1562 aa28.77■■■□□ 2.2
RPL38-205ENST00000530646 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
RPL38-205ENST00000530646 ACIN1Q9UKV3 1341 aaKnown RBP28.4■■■□□ 2.14
RPL38-205ENST00000530646 NEUROD1Q13562 356 aa28.31■■■□□ 2.12
RPL38-205ENST00000530646 CECR2Q9BXF3 1484 aa28.16■■■□□ 2.1
RPL38-205ENST00000530646 GTF3C3Q9Y5Q9 886 aa28.13■■■□□ 2.09
RPL38-205ENST00000530646 UNC13AQ9UPW8 1703 aa28.13■■■□□ 2.09
RPL38-205ENST00000530646 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
RPL38-205ENST00000530646 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
RPL38-205ENST00000530646 CENPBP07199 599 aaPredicted RBP27.96■■■□□ 2.07
RPL38-205ENST00000530646 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
RPL38-205ENST00000530646 DIEXFQ68CQ4 756 aaKnown RBP27.84■■■□□ 2.05
RPL38-205ENST00000530646 TRIM41Q8WV44 630 aa27.84■■■□□ 2.05
RPL38-205ENST00000530646 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
RPL38-205ENST00000530646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.8■■■□□ 2.04
RPL38-205ENST00000530646 FAM9AQ8IZU1 332 aaPredicted RBP27.8■■■□□ 2.04
RPL38-205ENST00000530646 WIZO95785 1651 aa27.75■■■□□ 2.03
RPL38-205ENST00000530646 CCER1Q8TC90 406 aaPredicted RBP27.74■■■□□ 2.03
RPL38-205ENST00000530646 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
RPL38-205ENST00000530646 EHMT2Q96KQ7 1210 aa27.63■■■□□ 2.01
RPL38-205ENST00000530646 SMARCA4P51532 1647 aa27.54■■■□□ 2
RPL38-205ENST00000530646 YTHDC1Q96MU7 727 aaKnown RBP27.33■■□□□ 1.97
RPL38-205ENST00000530646 ZNF316A6NFI3 1004 aaPredicted RBP27.31■■□□□ 1.96
RPL38-205ENST00000530646 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
RPL38-205ENST00000530646 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
RPL38-205ENST00000530646 BCL11AQ9H165 835 aa27.18■■□□□ 1.94
RPL38-205ENST00000530646 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
RPL38-205ENST00000530646 MIER1Q8N108 512 aa27.14■■□□□ 1.94
RPL38-205ENST00000530646 SMARCA2P51531 1590 aa27.09■■□□□ 1.93
RPL38-205ENST00000530646 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
RPL38-205ENST00000530646 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
RPL38-205ENST00000530646 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
RPL38-205ENST00000530646 EIF4G1Q04637 1599 aaKnown RBP26.94■■□□□ 1.9
RPL38-205ENST00000530646 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
RPL38-205ENST00000530646 ANP32EQ9BTT0 268 aa26.91■■□□□ 1.9
RPL38-205ENST00000530646 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
RPL38-205ENST00000530646 CEP162Q5TB80 1403 aa26.81■■□□□ 1.88
RPL38-205ENST00000530646 SUPT16HQ9Y5B9 1047 aaKnown RBP26.8■■□□□ 1.88
RPL38-205ENST00000530646 CLSPNQ9HAW4 1339 aa26.75■■□□□ 1.87
RPL38-205ENST00000530646 TSHZ2Q9NRE2 1034 aa26.72■■□□□ 1.87
RPL38-205ENST00000530646 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
RPL38-205ENST00000530646 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
RPL38-205ENST00000530646 TNIKQ9UKE5 1360 aa26.64■■□□□ 1.85
RPL38-205ENST00000530646 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
RPL38-205ENST00000530646 HNRNPUL2Q1KMD3 747 aaKnown RBP26.53■■□□□ 1.84
RPL38-205ENST00000530646 CC2D2AQ9P2K1 1620 aa26.52■■□□□ 1.84
RPL38-205ENST00000530646 SOGA1O94964 1423 aa26.46■■□□□ 1.83
RPL38-205ENST00000530646 PRKCSHP14314 528 aaPredicted RBP26.4■■□□□ 1.82
RPL38-205ENST00000530646 UBTFP17480 764 aaKnown RBP26.37■■□□□ 1.81
RPL38-205ENST00000530646 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
RPL38-205ENST00000530646 RUSC2Q8N2Y8 1516 aa26.35■■□□□ 1.81
RPL38-205ENST00000530646 EEA1Q15075 1411 aa26.3■■□□□ 1.8
RPL38-205ENST00000530646 DNAJC5BQ9UF47 199 aa26.27■■□□□ 1.8
RPL38-205ENST00000530646 GOLGA3Q08378 1498 aa26.27■■□□□ 1.8
RPL38-205ENST00000530646 CFTRP13569 1480 aa26.21■■□□□ 1.79
RPL38-205ENST00000530646 DHX57Q6P158 1386 aaKnown RBP26.13■■□□□ 1.77
RPL38-205ENST00000530646 BCANQ96GW7 911 aa26.13■■□□□ 1.77
RPL38-205ENST00000530646 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
RPL38-205ENST00000530646 CLIP1P30622 1438 aa26.07■■□□□ 1.76
RPL38-205ENST00000530646 KCNH8Q96L42 1107 aa26.07■■□□□ 1.76
RPL38-205ENST00000530646 VPS8Q8N3P4 1428 aa26.07■■□□□ 1.76
RPL38-205ENST00000530646 RBM19Q9Y4C8 960 aaKnown RBP26.06■■□□□ 1.76
RPL38-205ENST00000530646 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
RPL38-205ENST00000530646 CUX1P39880 1505 aa26.05■■□□□ 1.76
RPL38-205ENST00000530646 NESP48681 1621 aa26.04■■□□□ 1.76
RPL38-205ENST00000530646 FKBP8Q14318 412 aa26.03■■□□□ 1.76
RPL38-205ENST00000530646 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
RPL38-205ENST00000530646 KIF21BO75037 1637 aa25.97■■□□□ 1.75
RPL38-205ENST00000530646 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
RPL38-205ENST00000530646 APLP2Q06481 763 aa25.96■■□□□ 1.75
RPL38-205ENST00000530646 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
RPL38-205ENST00000530646 MSH5O43196 834 aa25.89■■□□□ 1.73
RPL38-205ENST00000530646 FANCD2Q9BXW9 1451 aa25.86■■□□□ 1.73
RPL38-205ENST00000530646 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
RPL38-205ENST00000530646 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
RPL38-205ENST00000530646 ITGAEP38570 1179 aa25.76■■□□□ 1.71
RPL38-205ENST00000530646 NEFLP07196 543 aa25.76■■□□□ 1.71
RPL38-205ENST00000530646 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
RPL38-205ENST00000530646 CUX2O14529 1486 aa25.68■■□□□ 1.7
RPL38-205ENST00000530646 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms