Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPCS1Q9Y6A9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPCS1Q9Y6A9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS1Q9Y6A9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SPCS1Q9Y6A9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS1Q9Y6A9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPCS1Q9Y6A9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPCS1Q9Y6A9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPCS1Q9Y6A9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS1Q9Y6A9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS1Q9Y6A9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPCS1Q9Y6A9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.86■□□□□ 0.61
SPCS1Q9Y6A9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPCS1Q9Y6A9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SPCS1Q9Y6A9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS1Q9Y6A9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.84■□□□□ 0.61
SPCS1Q9Y6A9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.83■□□□□ 0.61
SPCS1Q9Y6A9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPCS1Q9Y6A9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPCS1Q9Y6A9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPCS1Q9Y6A9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.82■□□□□ 0.6
SPCS1Q9Y6A9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPCS1Q9Y6A9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPCS1Q9Y6A9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SPCS1Q9Y6A9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS1Q9Y6A9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS1Q9Y6A9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SPCS1Q9Y6A9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPCS1Q9Y6A9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPCS1Q9Y6A9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPCS1Q9Y6A9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SPCS1Q9Y6A9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS1Q9Y6A9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS1Q9Y6A9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS1Q9Y6A9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS1Q9Y6A9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS1Q9Y6A9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SPCS1Q9Y6A9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPCS1Q9Y6A9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPCS1Q9Y6A9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.76■□□□□ 0.59
SPCS1Q9Y6A9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPCS1Q9Y6A9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.75■□□□□ 0.59
SPCS1Q9Y6A9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPCS1Q9Y6A9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPCS1Q9Y6A9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPCS1Q9Y6A9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPCS1Q9Y6A9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPCS1Q9Y6A9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPCS1Q9Y6A9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPCS1Q9Y6A9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPCS1Q9Y6A9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPCS1Q9Y6A9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SPCS1Q9Y6A9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.73■□□□□ 0.59
SPCS1Q9Y6A9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPCS1Q9Y6A9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SPCS1Q9Y6A9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPCS1Q9Y6A9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.72■□□□□ 0.59
SPCS1Q9Y6A9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.72■□□□□ 0.59
SPCS1Q9Y6A9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.71■□□□□ 0.59
SPCS1Q9Y6A9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPCS1Q9Y6A9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPCS1Q9Y6A9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPCS1Q9Y6A9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPCS1Q9Y6A9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPCS1Q9Y6A9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SPCS1Q9Y6A9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPCS1Q9Y6A9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.68■□□□□ 0.58
SPCS1Q9Y6A9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPCS1Q9Y6A9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.67■□□□□ 0.58
SPCS1Q9Y6A9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPCS1Q9Y6A9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.65■□□□□ 0.58
SPCS1Q9Y6A9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS1Q9Y6A9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.65■□□□□ 0.58
SPCS1Q9Y6A9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPCS1Q9Y6A9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPCS1Q9Y6A9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPCS1Q9Y6A9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS1Q9Y6A9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS1Q9Y6A9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS1Q9Y6A9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.62■□□□□ 0.57
SPCS1Q9Y6A9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPCS1Q9Y6A9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.62■□□□□ 0.57
SPCS1Q9Y6A9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.61■□□□□ 0.57
SPCS1Q9Y6A9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS1Q9Y6A9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS1Q9Y6A9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS1Q9Y6A9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS1Q9Y6A9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPCS1Q9Y6A9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPCS1Q9Y6A9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS1Q9Y6A9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS1Q9Y6A9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPCS1Q9Y6A9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC18.59■□□□□ 0.57
SPCS1Q9Y6A9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPCS1Q9Y6A9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SPCS1Q9Y6A9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.58■□□□□ 0.56
SPCS1Q9Y6A9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPCS1Q9Y6A9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SPCS1Q9Y6A9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SPCS1Q9Y6A9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms