Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHGA6Q9Y5G7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA6Q9Y5G7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA6Q9Y5G7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA6Q9Y5G7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA6Q9Y5G7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA6Q9Y5G7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA6Q9Y5G7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA6Q9Y5G7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
PCDHGA6Q9Y5G7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
PCDHGA6Q9Y5G7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.07■■□□□ 1.76
PCDHGA6Q9Y5G7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGA6Q9Y5G7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA6Q9Y5G7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHGA6Q9Y5G7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA6Q9Y5G7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA6Q9Y5G7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA6Q9Y5G7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGA6Q9Y5G7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.02■■□□□ 1.76
PCDHGA6Q9Y5G7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGA6Q9Y5G7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.01■■□□□ 1.75
PCDHGA6Q9Y5G7 MIR3665-201ENST00000578708 105 ntBASIC26.01■■□□□ 1.75
PCDHGA6Q9Y5G7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA6Q9Y5G7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGA6Q9Y5G7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGA6Q9Y5G7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PCDHGA6Q9Y5G7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PCDHGA6Q9Y5G7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGA6Q9Y5G7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.98■■□□□ 1.75
PCDHGA6Q9Y5G7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGA6Q9Y5G7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHGA6Q9Y5G7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA6Q9Y5G7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA6Q9Y5G7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHGA6Q9Y5G7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHGA6Q9Y5G7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.95■■□□□ 1.75
PCDHGA6Q9Y5G7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGA6Q9Y5G7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.93■■□□□ 1.74
PCDHGA6Q9Y5G7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.93■■□□□ 1.74
PCDHGA6Q9Y5G7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGA6Q9Y5G7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
PCDHGA6Q9Y5G7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGA6Q9Y5G7 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.92■■□□□ 1.74
PCDHGA6Q9Y5G7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA6Q9Y5G7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGA6Q9Y5G7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGA6Q9Y5G7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
PCDHGA6Q9Y5G7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDHGA6Q9Y5G7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PCDHGA6Q9Y5G7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHGA6Q9Y5G7 MIR762-201ENST00000390236 83 ntBASIC25.87■■□□□ 1.73
PCDHGA6Q9Y5G7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGA6Q9Y5G7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.86■■□□□ 1.73
PCDHGA6Q9Y5G7 AC087741.3-201ENST00000624270 1347 ntBASIC25.86■■□□□ 1.73
PCDHGA6Q9Y5G7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA6Q9Y5G7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA6Q9Y5G7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA6Q9Y5G7 DUX4L28-201ENST00000623687 678 ntBASIC25.85■■□□□ 1.73
PCDHGA6Q9Y5G7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PCDHGA6Q9Y5G7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGA6Q9Y5G7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGA6Q9Y5G7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGA6Q9Y5G7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHGA6Q9Y5G7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHGA6Q9Y5G7 AC005559.1-201ENST00000589661 871 ntBASIC25.8■■□□□ 1.72
PCDHGA6Q9Y5G7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.8■■□□□ 1.72
PCDHGA6Q9Y5G7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA6Q9Y5G7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA6Q9Y5G7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA6Q9Y5G7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA6Q9Y5G7 AC044849.2-201ENST00000606596 710 ntBASIC25.77■■□□□ 1.72
PCDHGA6Q9Y5G7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.76■■□□□ 1.71
PCDHGA6Q9Y5G7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHGA6Q9Y5G7 WASH5P-204ENST00000632292 975 ntBASIC25.75■■□□□ 1.71
PCDHGA6Q9Y5G7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGA6Q9Y5G7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHGA6Q9Y5G7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHGA6Q9Y5G7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHGA6Q9Y5G7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA6Q9Y5G7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA6Q9Y5G7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA6Q9Y5G7 ABHD17AP4-201ENST00000411545 909 ntBASIC25.71■■□□□ 1.71
PCDHGA6Q9Y5G7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA6Q9Y5G7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
PCDHGA6Q9Y5G7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGA6Q9Y5G7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PCDHGA6Q9Y5G7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA6Q9Y5G7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA6Q9Y5G7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PCDHGA6Q9Y5G7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA6Q9Y5G7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PCDHGA6Q9Y5G7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA6Q9Y5G7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA6Q9Y5G7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA6Q9Y5G7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PCDHGA6Q9Y5G7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHGA6Q9Y5G7 MIR7108-201ENST00000614319 87 ntBASIC25.63■■□□□ 1.69
PCDHGA6Q9Y5G7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA6Q9Y5G7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PCDHGA6Q9Y5G7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms