Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.15■■■□□ 2.74
PTPN18Q99952 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.15■■■□□ 2.74
PTPN18Q99952 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
PTPN18Q99952 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.15■■■□□ 2.74
PTPN18Q99952 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
PTPN18Q99952 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PTPN18Q99952 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.14■■■□□ 2.74
PTPN18Q99952 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.13■■■□□ 2.73
PTPN18Q99952 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
PTPN18Q99952 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.12■■■□□ 2.73
PTPN18Q99952 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
PTPN18Q99952 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PTPN18Q99952 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.1■■■□□ 2.73
PTPN18Q99952 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.1■■■□□ 2.73
PTPN18Q99952 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PTPN18Q99952 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PTPN18Q99952 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PTPN18Q99952 WASH5P-204ENST00000632292 975 ntBASIC32.05■■■□□ 2.72
PTPN18Q99952 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PTPN18Q99952 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
PTPN18Q99952 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PTPN18Q99952 MIR4449-201ENST00000578365 66 ntBASIC32.02■■■□□ 2.72
PTPN18Q99952 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
PTPN18Q99952 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PTPN18Q99952 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
PTPN18Q99952 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
PTPN18Q99952 DUX4L29-201ENST00000425409 679 ntBASIC31.98■■■□□ 2.71
PTPN18Q99952 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PTPN18Q99952 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PTPN18Q99952 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PTPN18Q99952 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PTPN18Q99952 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PTPN18Q99952 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
PTPN18Q99952 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.93■■■□□ 2.7
PTPN18Q99952 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PTPN18Q99952 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.92■■■□□ 2.7
PTPN18Q99952 MIR639-201ENST00000384974 98 ntBASIC31.92■■■□□ 2.7
PTPN18Q99952 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PTPN18Q99952 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.9■■■□□ 2.7
PTPN18Q99952 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PTPN18Q99952 AC021231.2-201ENST00000594613 730 ntBASIC31.89■■■□□ 2.7
PTPN18Q99952 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.88■■■□□ 2.69
PTPN18Q99952 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
PTPN18Q99952 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
PTPN18Q99952 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.86■■■□□ 2.69
PTPN18Q99952 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.84■■■□□ 2.69
PTPN18Q99952 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
PTPN18Q99952 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.83■■■□□ 2.69
PTPN18Q99952 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN18Q99952 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN18Q99952 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN18Q99952 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN18Q99952 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.8■■■□□ 2.68
PTPN18Q99952 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN18Q99952 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PTPN18Q99952 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN18Q99952 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN18Q99952 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.77■■■□□ 2.68
PTPN18Q99952 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
PTPN18Q99952 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PTPN18Q99952 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PTPN18Q99952 MIR3648-2-201ENST00000581792 180 ntBASIC31.74■■■□□ 2.67
PTPN18Q99952 MIR3648-1-201ENST00000615959 180 ntBASIC31.74■■■□□ 2.67
PTPN18Q99952 AC016575.1-201ENST00000607026 382 ntBASIC31.73■■■□□ 2.67
PTPN18Q99952 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTPN18Q99952 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPN18Q99952 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPN18Q99952 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPN18Q99952 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.71■■■□□ 2.67
PTPN18Q99952 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.71■■■□□ 2.67
PTPN18Q99952 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PTPN18Q99952 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PTPN18Q99952 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.7■■■□□ 2.67
PTPN18Q99952 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.7■■■□□ 2.67
PTPN18Q99952 HSD17B1P1-201ENST00000590052 955 ntBASIC31.69■■■□□ 2.66
PTPN18Q99952 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.68■■■□□ 2.66
PTPN18Q99952 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTPN18Q99952 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PTPN18Q99952 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.66■■■□□ 2.66
PTPN18Q99952 MIR6090-201ENST00000622481 60 ntBASIC31.65■■■□□ 2.66
PTPN18Q99952 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PTPN18Q99952 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.63■■■□□ 2.65
PTPN18Q99952 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.61■■■□□ 2.65
PTPN18Q99952 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PTPN18Q99952 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTPN18Q99952 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.6■■■□□ 2.65
PTPN18Q99952 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
PTPN18Q99952 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.58■■■□□ 2.65
PTPN18Q99952 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPN18Q99952 CR559946.2-201ENST00000623684 991 ntBASIC31.57■■■□□ 2.64
PTPN18Q99952 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
PTPN18Q99952 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPN18Q99952 AC108673.1-201ENST00000510422 1159 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
PTPN18Q99952 DUX4L11-201ENST00000611504 1267 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 DUX4L12-201ENST00000614593 1267 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 DUX4L14-201ENST00000621227 1267 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
PTPN18Q99952 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PTPN18Q99952 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms