Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.54■■■□□ 2
PTCD2Q8WV60 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.54■■■□□ 2
PTCD2Q8WV60 AC097358.2-201ENST00000607541 1159 ntBASIC27.53■■■□□ 2
PTCD2Q8WV60 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PTCD2Q8WV60 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.52■■■□□ 2
PTCD2Q8WV60 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.52■■■□□ 2
PTCD2Q8WV60 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCD2Q8WV60 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTCD2Q8WV60 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD2Q8WV60 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD2Q8WV60 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD2Q8WV60 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.48■■□□□ 1.99
PTCD2Q8WV60 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD2Q8WV60 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD2Q8WV60 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD2Q8WV60 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.47■■□□□ 1.99
PTCD2Q8WV60 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.45■■□□□ 1.98
PTCD2Q8WV60 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PTCD2Q8WV60 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.44■■□□□ 1.98
PTCD2Q8WV60 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.44■■□□□ 1.98
PTCD2Q8WV60 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PTCD2Q8WV60 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PTCD2Q8WV60 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
PTCD2Q8WV60 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.43■■□□□ 1.98
PTCD2Q8WV60 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PTCD2Q8WV60 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.41■■□□□ 1.98
PTCD2Q8WV60 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.41■■□□□ 1.98
PTCD2Q8WV60 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PTCD2Q8WV60 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PTCD2Q8WV60 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PTCD2Q8WV60 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PTCD2Q8WV60 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PTCD2Q8WV60 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.38■■□□□ 1.97
PTCD2Q8WV60 AL133380.1-201ENST00000506013 324 ntBASIC27.37■■□□□ 1.97
PTCD2Q8WV60 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PTCD2Q8WV60 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PTCD2Q8WV60 SUZ12P1-203ENST00000578195 985 ntBASIC27.33■■□□□ 1.97
PTCD2Q8WV60 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.32■■□□□ 1.96
PTCD2Q8WV60 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
PTCD2Q8WV60 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.3■■□□□ 1.96
PTCD2Q8WV60 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PTCD2Q8WV60 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD2Q8WV60 CAHM-201ENST00000604200 896 ntBASIC27.29■■□□□ 1.96
PTCD2Q8WV60 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD2Q8WV60 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.28■■□□□ 1.96
PTCD2Q8WV60 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.27■■□□□ 1.96
PTCD2Q8WV60 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PTCD2Q8WV60 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PTCD2Q8WV60 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
PTCD2Q8WV60 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD2Q8WV60 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.24■■□□□ 1.95
PTCD2Q8WV60 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
PTCD2Q8WV60 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
PTCD2Q8WV60 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PTCD2Q8WV60 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PTCD2Q8WV60 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PTCD2Q8WV60 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PTCD2Q8WV60 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PTCD2Q8WV60 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
PTCD2Q8WV60 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PTCD2Q8WV60 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.19■■□□□ 1.94
PTCD2Q8WV60 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.19■■□□□ 1.94
PTCD2Q8WV60 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PTCD2Q8WV60 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.17■■□□□ 1.94
PTCD2Q8WV60 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PTCD2Q8WV60 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
PTCD2Q8WV60 AL391121.1-201ENST00000607967 1349 ntBASIC27.16■■□□□ 1.94
PTCD2Q8WV60 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PTCD2Q8WV60 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCD2Q8WV60 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
PTCD2Q8WV60 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.14■■□□□ 1.93
PTCD2Q8WV60 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PTCD2Q8WV60 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PTCD2Q8WV60 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PTCD2Q8WV60 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
PTCD2Q8WV60 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PTCD2Q8WV60 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.11■■□□□ 1.93
PTCD2Q8WV60 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PTCD2Q8WV60 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PTCD2Q8WV60 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PTCD2Q8WV60 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PTCD2Q8WV60 AL161658.1-201ENST00000623641 1967 ntBASIC27.06■■□□□ 1.92
PTCD2Q8WV60 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PTCD2Q8WV60 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.06■■□□□ 1.92
PTCD2Q8WV60 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
PTCD2Q8WV60 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PTCD2Q8WV60 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD2Q8WV60 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD2Q8WV60 WASH5P-204ENST00000632292 975 ntBASIC27.03■■□□□ 1.92
PTCD2Q8WV60 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCD2Q8WV60 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PTCD2Q8WV60 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PTCD2Q8WV60 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCD2Q8WV60 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.01■■□□□ 1.91
PTCD2Q8WV60 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD2Q8WV60 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27■■□□□ 1.91
PTCD2Q8WV60 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PTCD2Q8WV60 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27■■□□□ 1.91
PTCD2Q8WV60 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27■■□□□ 1.91
PTCD2Q8WV60 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms