Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
U2AF1L4Q8WU68 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.38■■■□□ 2.61
U2AF1L4Q8WU68 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.37■■■□□ 2.61
U2AF1L4Q8WU68 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.37■■■□□ 2.61
U2AF1L4Q8WU68 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.37■■■□□ 2.61
U2AF1L4Q8WU68 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
U2AF1L4Q8WU68 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
U2AF1L4Q8WU68 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
U2AF1L4Q8WU68 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
U2AF1L4Q8WU68 MIR4449-201ENST00000578365 66 ntBASIC31.32■■■□□ 2.6
U2AF1L4Q8WU68 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
U2AF1L4Q8WU68 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
U2AF1L4Q8WU68 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
U2AF1L4Q8WU68 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
U2AF1L4Q8WU68 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.28■■■□□ 2.6
U2AF1L4Q8WU68 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.26■■■□□ 2.59
U2AF1L4Q8WU68 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
U2AF1L4Q8WU68 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
U2AF1L4Q8WU68 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
U2AF1L4Q8WU68 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.23■■■□□ 2.59
U2AF1L4Q8WU68 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
U2AF1L4Q8WU68 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
U2AF1L4Q8WU68 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
U2AF1L4Q8WU68 MIR639-201ENST00000384974 98 ntBASIC31.19■■■□□ 2.58
U2AF1L4Q8WU68 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
U2AF1L4Q8WU68 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
U2AF1L4Q8WU68 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.18■■■□□ 2.58
U2AF1L4Q8WU68 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.18■■■□□ 2.58
U2AF1L4Q8WU68 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.17■■■□□ 2.58
U2AF1L4Q8WU68 DUX4L29-201ENST00000425409 679 ntBASIC31.15■■■□□ 2.58
U2AF1L4Q8WU68 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.14■■■□□ 2.57
U2AF1L4Q8WU68 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
U2AF1L4Q8WU68 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
U2AF1L4Q8WU68 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.13■■■□□ 2.57
U2AF1L4Q8WU68 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
U2AF1L4Q8WU68 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
U2AF1L4Q8WU68 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
U2AF1L4Q8WU68 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
U2AF1L4Q8WU68 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.09■■■□□ 2.57
U2AF1L4Q8WU68 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
U2AF1L4Q8WU68 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.07■■■□□ 2.56
U2AF1L4Q8WU68 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
U2AF1L4Q8WU68 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
U2AF1L4Q8WU68 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.05■■■□□ 2.56
U2AF1L4Q8WU68 HSD17B1P1-201ENST00000590052 955 ntBASIC31.05■■■□□ 2.56
U2AF1L4Q8WU68 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
U2AF1L4Q8WU68 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
U2AF1L4Q8WU68 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
U2AF1L4Q8WU68 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.02■■■□□ 2.56
U2AF1L4Q8WU68 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.01■■■□□ 2.55
U2AF1L4Q8WU68 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.99■■■□□ 2.55
U2AF1L4Q8WU68 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.99■■■□□ 2.55
U2AF1L4Q8WU68 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
U2AF1L4Q8WU68 AC021231.2-201ENST00000594613 730 ntBASIC30.98■■■□□ 2.55
U2AF1L4Q8WU68 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
U2AF1L4Q8WU68 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
U2AF1L4Q8WU68 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.96■■■□□ 2.55
U2AF1L4Q8WU68 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.96■■■□□ 2.55
U2AF1L4Q8WU68 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.96■■■□□ 2.55
U2AF1L4Q8WU68 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.94■■■□□ 2.54
U2AF1L4Q8WU68 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 MIR3648-2-201ENST00000581792 180 ntBASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 AC016575.1-201ENST00000607026 382 ntBASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 MIR3648-1-201ENST00000615959 180 ntBASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
U2AF1L4Q8WU68 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.92■■■□□ 2.54
U2AF1L4Q8WU68 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.92■■■□□ 2.54
U2AF1L4Q8WU68 WASH5P-204ENST00000632292 975 ntBASIC30.92■■■□□ 2.54
U2AF1L4Q8WU68 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.91■■■□□ 2.54
U2AF1L4Q8WU68 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
U2AF1L4Q8WU68 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.91■■■□□ 2.54
U2AF1L4Q8WU68 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
U2AF1L4Q8WU68 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
U2AF1L4Q8WU68 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
U2AF1L4Q8WU68 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.9■■■□□ 2.54
U2AF1L4Q8WU68 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
U2AF1L4Q8WU68 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.88■■■□□ 2.53
U2AF1L4Q8WU68 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
U2AF1L4Q8WU68 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
U2AF1L4Q8WU68 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
U2AF1L4Q8WU68 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
U2AF1L4Q8WU68 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
U2AF1L4Q8WU68 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
U2AF1L4Q8WU68 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.83■■■□□ 2.53
U2AF1L4Q8WU68 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
U2AF1L4Q8WU68 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.81■■■□□ 2.52
U2AF1L4Q8WU68 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
U2AF1L4Q8WU68 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.8■■■□□ 2.52
U2AF1L4Q8WU68 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
U2AF1L4Q8WU68 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
U2AF1L4Q8WU68 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
U2AF1L4Q8WU68 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.76■■■□□ 2.51
U2AF1L4Q8WU68 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
U2AF1L4Q8WU68 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.75■■■□□ 2.51
U2AF1L4Q8WU68 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
U2AF1L4Q8WU68 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
U2AF1L4Q8WU68 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms