Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
NIPAL1Q6NVV3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
NIPAL1Q6NVV3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NIPAL1Q6NVV3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NIPAL1Q6NVV3 AC136428.2-201ENST00000563187 214 ntBASIC25.91■■□□□ 1.74
NIPAL1Q6NVV3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.91■■□□□ 1.74
NIPAL1Q6NVV3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NIPAL1Q6NVV3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NIPAL1Q6NVV3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.89■■□□□ 1.74
NIPAL1Q6NVV3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.89■■□□□ 1.74
NIPAL1Q6NVV3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.89■■□□□ 1.74
NIPAL1Q6NVV3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
NIPAL1Q6NVV3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
NIPAL1Q6NVV3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NIPAL1Q6NVV3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.86■■□□□ 1.73
NIPAL1Q6NVV3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.85■■□□□ 1.73
NIPAL1Q6NVV3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.85■■□□□ 1.73
NIPAL1Q6NVV3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
NIPAL1Q6NVV3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NIPAL1Q6NVV3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
NIPAL1Q6NVV3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NIPAL1Q6NVV3 AC120057.4-201ENST00000624722 1615 ntBASIC25.82■■□□□ 1.72
NIPAL1Q6NVV3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NIPAL1Q6NVV3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NIPAL1Q6NVV3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NIPAL1Q6NVV3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NIPAL1Q6NVV3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.8■■□□□ 1.72
NIPAL1Q6NVV3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NIPAL1Q6NVV3 AC139426.1-201ENST00000568218 2529 ntBASIC25.79■■□□□ 1.72
NIPAL1Q6NVV3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
NIPAL1Q6NVV3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.79■■□□□ 1.72
NIPAL1Q6NVV3 WASH5P-204ENST00000632292 975 ntBASIC25.79■■□□□ 1.72
NIPAL1Q6NVV3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NIPAL1Q6NVV3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NIPAL1Q6NVV3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NIPAL1Q6NVV3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
NIPAL1Q6NVV3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NIPAL1Q6NVV3 AL391121.1-201ENST00000607967 1349 ntBASIC25.77■■□□□ 1.72
NIPAL1Q6NVV3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NIPAL1Q6NVV3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.76■■□□□ 1.71
NIPAL1Q6NVV3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.76■■□□□ 1.71
NIPAL1Q6NVV3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.76■■□□□ 1.71
NIPAL1Q6NVV3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NIPAL1Q6NVV3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.75■■□□□ 1.71
NIPAL1Q6NVV3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.74■■□□□ 1.71
NIPAL1Q6NVV3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.74■■□□□ 1.71
NIPAL1Q6NVV3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NIPAL1Q6NVV3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.72■■□□□ 1.71
NIPAL1Q6NVV3 CAHM-201ENST00000604200 896 ntBASIC25.72■■□□□ 1.71
NIPAL1Q6NVV3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.71■■□□□ 1.71
NIPAL1Q6NVV3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.7■■□□□ 1.7
NIPAL1Q6NVV3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
NIPAL1Q6NVV3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NIPAL1Q6NVV3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
NIPAL1Q6NVV3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NIPAL1Q6NVV3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
NIPAL1Q6NVV3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
NIPAL1Q6NVV3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.68■■□□□ 1.7
NIPAL1Q6NVV3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
NIPAL1Q6NVV3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NIPAL1Q6NVV3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NIPAL1Q6NVV3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NIPAL1Q6NVV3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
NIPAL1Q6NVV3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NIPAL1Q6NVV3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NIPAL1Q6NVV3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NIPAL1Q6NVV3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NIPAL1Q6NVV3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NIPAL1Q6NVV3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
NIPAL1Q6NVV3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.7
NIPAL1Q6NVV3 SUZ12P1-203ENST00000578195 985 ntBASIC25.64■■□□□ 1.7
NIPAL1Q6NVV3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NIPAL1Q6NVV3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NIPAL1Q6NVV3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NIPAL1Q6NVV3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NIPAL1Q6NVV3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NIPAL1Q6NVV3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NIPAL1Q6NVV3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
NIPAL1Q6NVV3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NIPAL1Q6NVV3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NIPAL1Q6NVV3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NIPAL1Q6NVV3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NIPAL1Q6NVV3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.56■■□□□ 1.68
NIPAL1Q6NVV3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.56■■□□□ 1.68
NIPAL1Q6NVV3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NIPAL1Q6NVV3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NIPAL1Q6NVV3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NIPAL1Q6NVV3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.53■■□□□ 1.68
NIPAL1Q6NVV3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
NIPAL1Q6NVV3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.52■■□□□ 1.68
NIPAL1Q6NVV3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
NIPAL1Q6NVV3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NIPAL1Q6NVV3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NIPAL1Q6NVV3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NIPAL1Q6NVV3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.49■■□□□ 1.67
NIPAL1Q6NVV3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NIPAL1Q6NVV3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NIPAL1Q6NVV3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NIPAL1Q6NVV3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.48■■□□□ 1.67
NIPAL1Q6NVV3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms