Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FREM1Q5H8C1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.05■■□□□ 1.44
FREM1Q5H8C1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
FREM1Q5H8C1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
FREM1Q5H8C1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
FREM1Q5H8C1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FREM1Q5H8C1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
FREM1Q5H8C1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FREM1Q5H8C1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FREM1Q5H8C1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FREM1Q5H8C1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
FREM1Q5H8C1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
FREM1Q5H8C1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.01■■□□□ 1.43
FREM1Q5H8C1 AC120057.4-201ENST00000624722 1615 ntBASIC24.01■■□□□ 1.43
FREM1Q5H8C1 RPS2P35-201ENST00000443417 897 ntBASIC24■■□□□ 1.43
FREM1Q5H8C1 WASH5P-204ENST00000632292 975 ntBASIC23.99■■□□□ 1.43
FREM1Q5H8C1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
FREM1Q5H8C1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
FREM1Q5H8C1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.98■■□□□ 1.43
FREM1Q5H8C1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
FREM1Q5H8C1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
FREM1Q5H8C1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
FREM1Q5H8C1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.93■■□□□ 1.42
FREM1Q5H8C1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FREM1Q5H8C1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
FREM1Q5H8C1 AL162393.1-201ENST00000437852 946 ntBASIC23.93■■□□□ 1.42
FREM1Q5H8C1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FREM1Q5H8C1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.92■■□□□ 1.42
FREM1Q5H8C1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
FREM1Q5H8C1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FREM1Q5H8C1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.89■■□□□ 1.42
FREM1Q5H8C1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.41
FREM1Q5H8C1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.88■■□□□ 1.41
FREM1Q5H8C1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.87■■□□□ 1.41
FREM1Q5H8C1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FREM1Q5H8C1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FREM1Q5H8C1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FREM1Q5H8C1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FREM1Q5H8C1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FREM1Q5H8C1 MIR762-201ENST00000390236 83 ntBASIC23.85■■□□□ 1.41
FREM1Q5H8C1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
FREM1Q5H8C1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FREM1Q5H8C1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FREM1Q5H8C1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FREM1Q5H8C1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FREM1Q5H8C1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.83■■□□□ 1.41
FREM1Q5H8C1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.83■■□□□ 1.41
FREM1Q5H8C1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
FREM1Q5H8C1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FREM1Q5H8C1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
FREM1Q5H8C1 AC005559.1-201ENST00000589661 871 ntBASIC23.82■■□□□ 1.4
FREM1Q5H8C1 DUX4L28-201ENST00000623687 678 ntBASIC23.82■■□□□ 1.4
FREM1Q5H8C1 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.82■■□□□ 1.4
FREM1Q5H8C1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FREM1Q5H8C1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FREM1Q5H8C1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FREM1Q5H8C1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FREM1Q5H8C1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.79■■□□□ 1.4
FREM1Q5H8C1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.79■■□□□ 1.4
FREM1Q5H8C1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FREM1Q5H8C1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FREM1Q5H8C1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.78■■□□□ 1.4
FREM1Q5H8C1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.78■■□□□ 1.4
FREM1Q5H8C1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FREM1Q5H8C1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.78■■□□□ 1.4
FREM1Q5H8C1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
FREM1Q5H8C1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.77■■□□□ 1.4
FREM1Q5H8C1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FREM1Q5H8C1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
FREM1Q5H8C1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FREM1Q5H8C1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
FREM1Q5H8C1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
FREM1Q5H8C1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
FREM1Q5H8C1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FREM1Q5H8C1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
FREM1Q5H8C1 AP006261.1-201ENST00000584783 668 ntBASIC23.75■■□□□ 1.39
FREM1Q5H8C1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
FREM1Q5H8C1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
FREM1Q5H8C1 MIR3665-201ENST00000578708 105 ntBASIC23.74■■□□□ 1.39
FREM1Q5H8C1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FREM1Q5H8C1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FREM1Q5H8C1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
FREM1Q5H8C1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FREM1Q5H8C1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FREM1Q5H8C1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
FREM1Q5H8C1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
FREM1Q5H8C1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.7■■□□□ 1.38
FREM1Q5H8C1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
FREM1Q5H8C1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
FREM1Q5H8C1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
FREM1Q5H8C1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
FREM1Q5H8C1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
FREM1Q5H8C1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.68■■□□□ 1.38
FREM1Q5H8C1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
FREM1Q5H8C1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
FREM1Q5H8C1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
FREM1Q5H8C1 AC044849.2-201ENST00000606596 710 ntBASIC23.67■■□□□ 1.38
FREM1Q5H8C1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
FREM1Q5H8C1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FREM1Q5H8C1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms