Protein–RNA interactions for Protein: P46531

NOTCH1, Neurogenic locus notch homolog protein 1, humanhuman

Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1P46531 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.89■□□□□ 0.93
NOTCH1P46531 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.89■□□□□ 0.93
NOTCH1P46531 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.89■□□□□ 0.93
NOTCH1P46531 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NOTCH1P46531 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NOTCH1P46531 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
NOTCH1P46531 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.87■□□□□ 0.93
NOTCH1P46531 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NOTCH1P46531 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NOTCH1P46531 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NOTCH1P46531 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NOTCH1P46531 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
NOTCH1P46531 MIR3648-2-201ENST00000581792 180 ntBASIC20.84■□□□□ 0.93
NOTCH1P46531 MIR3648-1-201ENST00000615959 180 ntBASIC20.84■□□□□ 0.93
NOTCH1P46531 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.83■□□□□ 0.93
NOTCH1P46531 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NOTCH1P46531 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NOTCH1P46531 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NOTCH1P46531 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NOTCH1P46531 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NOTCH1P46531 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NOTCH1P46531 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.78■□□□□ 0.92
NOTCH1P46531 DUX4L29-201ENST00000425409 679 ntBASIC20.77■□□□□ 0.92
NOTCH1P46531 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NOTCH1P46531 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
NOTCH1P46531 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH1P46531 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH1P46531 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH1P46531 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NOTCH1P46531 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.75■□□□□ 0.91
NOTCH1P46531 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NOTCH1P46531 CR559946.2-201ENST00000623684 991 ntBASIC20.75■□□□□ 0.91
NOTCH1P46531 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NOTCH1P46531 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.74■□□□□ 0.91
NOTCH1P46531 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NOTCH1P46531 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH1P46531 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NOTCH1P46531 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NOTCH1P46531 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.72■□□□□ 0.91
NOTCH1P46531 AC016575.1-201ENST00000607026 382 ntBASIC20.72■□□□□ 0.91
NOTCH1P46531 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.72■□□□□ 0.91
NOTCH1P46531 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NOTCH1P46531 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.71■□□□□ 0.91
NOTCH1P46531 AC021231.2-201ENST00000594613 730 ntBASIC20.7■□□□□ 0.9
NOTCH1P46531 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.7■□□□□ 0.9
NOTCH1P46531 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOTCH1P46531 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NOTCH1P46531 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOTCH1P46531 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH1P46531 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.67■□□□□ 0.9
NOTCH1P46531 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.67■□□□□ 0.9
NOTCH1P46531 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH1P46531 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.65■□□□□ 0.9
NOTCH1P46531 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.65■□□□□ 0.9
NOTCH1P46531 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.65■□□□□ 0.9
NOTCH1P46531 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NOTCH1P46531 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.64■□□□□ 0.89
NOTCH1P46531 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.64■□□□□ 0.89
NOTCH1P46531 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NOTCH1P46531 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH1P46531 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH1P46531 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH1P46531 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.61■□□□□ 0.89
NOTCH1P46531 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.6■□□□□ 0.89
NOTCH1P46531 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.6■□□□□ 0.89
NOTCH1P46531 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH1P46531 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NOTCH1P46531 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NOTCH1P46531 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.58■□□□□ 0.88
NOTCH1P46531 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NOTCH1P46531 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NOTCH1P46531 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NOTCH1P46531 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.57■□□□□ 0.88
NOTCH1P46531 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.57■□□□□ 0.88
NOTCH1P46531 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH1P46531 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NOTCH1P46531 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.57■□□□□ 0.88
NOTCH1P46531 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NOTCH1P46531 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NOTCH1P46531 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH1P46531 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH1P46531 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH1P46531 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH1P46531 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH1P46531 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH1P46531 RARRES2P2-201ENST00000394842 485 ntBASIC20.52■□□□□ 0.88
NOTCH1P46531 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.52■□□□□ 0.88
NOTCH1P46531 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH1P46531 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NOTCH1P46531 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NOTCH1P46531 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NOTCH1P46531 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.5■□□□□ 0.87
NOTCH1P46531 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.5■□□□□ 0.87
NOTCH1P46531 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.49■□□□□ 0.87
NOTCH1P46531 LINC01971-201ENST00000617888 1048 ntBASIC20.49■□□□□ 0.87
NOTCH1P46531 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.49■□□□□ 0.87
NOTCH1P46531 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NOTCH1P46531 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NOTCH1P46531 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NOTCH1P46531 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms