Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 AC139426.1-201ENST00000568218 2529 ntBASIC28.97■■■□□ 2.23
BRD2P25440 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.97■■■□□ 2.23
BRD2P25440 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
BRD2P25440 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
BRD2P25440 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.95■■■□□ 2.22
BRD2P25440 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
BRD2P25440 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
BRD2P25440 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
BRD2P25440 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
BRD2P25440 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
BRD2P25440 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
BRD2P25440 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
BRD2P25440 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
BRD2P25440 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
BRD2P25440 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
BRD2P25440 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
BRD2P25440 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
BRD2P25440 AC136428.2-201ENST00000563187 214 ntBASIC28.87■■■□□ 2.21
BRD2P25440 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.87■■■□□ 2.21
BRD2P25440 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
BRD2P25440 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
BRD2P25440 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
BRD2P25440 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
BRD2P25440 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.85■■■□□ 2.21
BRD2P25440 AC097358.2-201ENST00000607541 1159 ntBASIC28.85■■■□□ 2.21
BRD2P25440 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
BRD2P25440 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
BRD2P25440 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.83■■■□□ 2.21
BRD2P25440 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.82■■■□□ 2.2
BRD2P25440 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.82■■■□□ 2.2
BRD2P25440 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
BRD2P25440 WASH5P-204ENST00000632292 975 ntBASIC28.82■■■□□ 2.2
BRD2P25440 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
BRD2P25440 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
BRD2P25440 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
BRD2P25440 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
BRD2P25440 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.8■■■□□ 2.2
BRD2P25440 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.8■■■□□ 2.2
BRD2P25440 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.8■■■□□ 2.2
BRD2P25440 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.79■■■□□ 2.2
BRD2P25440 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
BRD2P25440 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
BRD2P25440 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
BRD2P25440 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.74■■■□□ 2.19
BRD2P25440 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
BRD2P25440 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.73■■■□□ 2.19
BRD2P25440 CAHM-201ENST00000604200 896 ntBASIC28.72■■■□□ 2.19
BRD2P25440 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
BRD2P25440 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
BRD2P25440 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
BRD2P25440 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
BRD2P25440 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
BRD2P25440 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.7■■■□□ 2.18
BRD2P25440 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
BRD2P25440 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
BRD2P25440 AL391121.1-201ENST00000607967 1349 ntBASIC28.69■■■□□ 2.18
BRD2P25440 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BRD2P25440 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
BRD2P25440 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
BRD2P25440 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.67■■■□□ 2.18
BRD2P25440 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
BRD2P25440 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
BRD2P25440 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.65■■■□□ 2.18
BRD2P25440 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
BRD2P25440 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
BRD2P25440 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
BRD2P25440 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD2P25440 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.62■■■□□ 2.17
BRD2P25440 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD2P25440 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD2P25440 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
BRD2P25440 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.61■■■□□ 2.17
BRD2P25440 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
BRD2P25440 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
BRD2P25440 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
BRD2P25440 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
BRD2P25440 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
BRD2P25440 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.58■■■□□ 2.17
BRD2P25440 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.57■■■□□ 2.16
BRD2P25440 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
BRD2P25440 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.57■■■□□ 2.16
BRD2P25440 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.54■■■□□ 2.16
BRD2P25440 SUZ12P1-203ENST00000578195 985 ntBASIC28.54■■■□□ 2.16
BRD2P25440 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
BRD2P25440 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
BRD2P25440 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
BRD2P25440 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
BRD2P25440 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.53■■■□□ 2.16
BRD2P25440 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
BRD2P25440 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
BRD2P25440 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
BRD2P25440 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.16
BRD2P25440 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.51■■■□□ 2.15
BRD2P25440 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
BRD2P25440 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.49■■■□□ 2.15
BRD2P25440 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
BRD2P25440 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
BRD2P25440 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.46■■■□□ 2.15
BRD2P25440 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.46■■■□□ 2.15
BRD2P25440 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms