Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
DDX39AO00148 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
DDX39AO00148 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
DDX39AO00148 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.66■■■□□ 2.5
DDX39AO00148 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX39AO00148 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX39AO00148 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.64■■■□□ 2.5
DDX39AO00148 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.64■■■□□ 2.5
DDX39AO00148 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
DDX39AO00148 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
DDX39AO00148 AC120057.4-201ENST00000624722 1615 ntBASIC30.63■■■□□ 2.49
DDX39AO00148 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
DDX39AO00148 RPS2P35-201ENST00000443417 897 ntBASIC30.62■■■□□ 2.49
DDX39AO00148 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
DDX39AO00148 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
DDX39AO00148 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX39AO00148 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.61■■■□□ 2.49
DDX39AO00148 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX39AO00148 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX39AO00148 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.6■■■□□ 2.49
DDX39AO00148 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
DDX39AO00148 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
DDX39AO00148 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.59■■■□□ 2.49
DDX39AO00148 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
DDX39AO00148 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.57■■■□□ 2.48
DDX39AO00148 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
DDX39AO00148 AL162393.1-201ENST00000437852 946 ntBASIC30.56■■■□□ 2.48
DDX39AO00148 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.55■■■□□ 2.48
DDX39AO00148 MIR762-201ENST00000390236 83 ntBASIC30.53■■■□□ 2.48
DDX39AO00148 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.52■■■□□ 2.48
DDX39AO00148 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
DDX39AO00148 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
DDX39AO00148 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
DDX39AO00148 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.49■■■□□ 2.47
DDX39AO00148 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX39AO00148 AP006261.1-201ENST00000584783 668 ntBASIC30.49■■■□□ 2.47
DDX39AO00148 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
DDX39AO00148 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
DDX39AO00148 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.47■■■□□ 2.47
DDX39AO00148 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.47■■■□□ 2.47
DDX39AO00148 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.45■■■□□ 2.47
DDX39AO00148 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.44■■■□□ 2.46
DDX39AO00148 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX39AO00148 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
DDX39AO00148 DUX4L28-201ENST00000623687 678 ntBASIC30.42■■■□□ 2.46
DDX39AO00148 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
DDX39AO00148 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
DDX39AO00148 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
DDX39AO00148 AC005559.1-201ENST00000589661 871 ntBASIC30.4■■■□□ 2.46
DDX39AO00148 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
DDX39AO00148 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.46
DDX39AO00148 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.39■■■□□ 2.46
DDX39AO00148 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
DDX39AO00148 MIR3665-201ENST00000578708 105 ntBASIC30.38■■■□□ 2.45
DDX39AO00148 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
DDX39AO00148 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
DDX39AO00148 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
DDX39AO00148 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
DDX39AO00148 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
DDX39AO00148 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
DDX39AO00148 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
DDX39AO00148 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
DDX39AO00148 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
DDX39AO00148 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
DDX39AO00148 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
DDX39AO00148 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
DDX39AO00148 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
DDX39AO00148 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
DDX39AO00148 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
DDX39AO00148 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.28■■■□□ 2.44
DDX39AO00148 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
DDX39AO00148 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
DDX39AO00148 AC087741.3-201ENST00000624270 1347 ntBASIC30.27■■■□□ 2.44
DDX39AO00148 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.27■■■□□ 2.44
DDX39AO00148 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
DDX39AO00148 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
DDX39AO00148 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
DDX39AO00148 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.24■■■□□ 2.43
DDX39AO00148 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
DDX39AO00148 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
DDX39AO00148 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
DDX39AO00148 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
DDX39AO00148 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.21■■■□□ 2.43
DDX39AO00148 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.2■■■□□ 2.43
DDX39AO00148 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.2■■■□□ 2.43
DDX39AO00148 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
DDX39AO00148 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
DDX39AO00148 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.19■■■□□ 2.42
DDX39AO00148 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
DDX39AO00148 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
DDX39AO00148 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
DDX39AO00148 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
DDX39AO00148 AL161658.1-201ENST00000623641 1967 ntBASIC30.18■■■□□ 2.42
DDX39AO00148 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX39AO00148 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX39AO00148 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX39AO00148 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX39AO00148 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
DDX39AO00148 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.16■■■□□ 2.42
DDX39AO00148 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms