Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC40.83■■■■■ 4.13
HFM1A2PYH4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC40.82■■■■■ 4.13
HFM1A2PYH4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC40.82■■■■■ 4.12
HFM1A2PYH4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
HFM1A2PYH4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC40.8■■■■■ 4.12
HFM1A2PYH4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
HFM1A2PYH4 HNRNPLP2-201ENST00000568980 1570 ntBASIC40.79■■■■■ 4.12
HFM1A2PYH4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC40.78■■■■■ 4.12
HFM1A2PYH4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC40.78■■■■■ 4.12
HFM1A2PYH4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC40.78■■■■■ 4.12
HFM1A2PYH4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
HFM1A2PYH4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC40.77■■■■■ 4.12
HFM1A2PYH4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
HFM1A2PYH4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC40.72■■■■■ 4.11
HFM1A2PYH4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC40.71■■■■■ 4.11
HFM1A2PYH4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC40.7■■■■■ 4.11
HFM1A2PYH4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
HFM1A2PYH4 AL162393.1-201ENST00000437852 946 ntBASIC40.67■■■■■ 4.1
HFM1A2PYH4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
HFM1A2PYH4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
HFM1A2PYH4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC40.63■■■■■ 4.09
HFM1A2PYH4 AP006261.1-201ENST00000584783 668 ntBASIC40.62■■■■■ 4.09
HFM1A2PYH4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
HFM1A2PYH4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC40.6■■■■■ 4.09
HFM1A2PYH4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
HFM1A2PYH4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC40.58■■■■■ 4.09
HFM1A2PYH4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
HFM1A2PYH4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
HFM1A2PYH4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC40.55■■■■■ 4.08
HFM1A2PYH4 MIR762-201ENST00000390236 83 ntBASIC40.55■■■■■ 4.08
HFM1A2PYH4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC40.53■■■■■ 4.08
HFM1A2PYH4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
HFM1A2PYH4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC40.53■■■■■ 4.08
HFM1A2PYH4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
HFM1A2PYH4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
HFM1A2PYH4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC40.51■■■■■ 4.08
HFM1A2PYH4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC40.51■■■■■ 4.08
HFM1A2PYH4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
HFM1A2PYH4 CHML-205ENST00000638160 705 ntTSL 3 BASIC40.5■■■■■ 4.07
HFM1A2PYH4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC40.49■■■■■ 4.07
HFM1A2PYH4 DUX4L28-201ENST00000623687 678 ntBASIC40.49■■■■■ 4.07
HFM1A2PYH4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
HFM1A2PYH4 RPS2P35-201ENST00000443417 897 ntBASIC40.47■■■■■ 4.07
HFM1A2PYH4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
HFM1A2PYH4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
HFM1A2PYH4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC40.46■■■■■ 4.07
HFM1A2PYH4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC40.46■■■■■ 4.07
HFM1A2PYH4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
HFM1A2PYH4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC40.43■■■■■ 4.06
HFM1A2PYH4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
HFM1A2PYH4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
HFM1A2PYH4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC40.4■■■■■ 4.06
HFM1A2PYH4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
HFM1A2PYH4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
HFM1A2PYH4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC40.35■■■■■ 4.05
HFM1A2PYH4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC40.35■■■■■ 4.05
HFM1A2PYH4 AC005559.1-201ENST00000589661 871 ntBASIC40.35■■■■■ 4.05
HFM1A2PYH4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC40.35■■■■■ 4.05
HFM1A2PYH4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
HFM1A2PYH4 MIR3665-201ENST00000578708 105 ntBASIC40.34■■■■■ 4.05
HFM1A2PYH4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC40.32■■■■■ 4.04
HFM1A2PYH4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
HFM1A2PYH4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HFM1A2PYH4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HFM1A2PYH4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC40.28■■■■■ 4.04
HFM1A2PYH4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC40.28■■■■■ 4.04
HFM1A2PYH4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HFM1A2PYH4 AC087741.3-201ENST00000624270 1347 ntBASIC40.28■■■■■ 4.04
HFM1A2PYH4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
HFM1A2PYH4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
HFM1A2PYH4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
HFM1A2PYH4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
HFM1A2PYH4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
HFM1A2PYH4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC40.24■■■■■ 4.03
HFM1A2PYH4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
HFM1A2PYH4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC40.23■■■■■ 4.03
HFM1A2PYH4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
HFM1A2PYH4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
HFM1A2PYH4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
HFM1A2PYH4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
HFM1A2PYH4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC40.19■■■■■ 4.02
HFM1A2PYH4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HFM1A2PYH4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
HFM1A2PYH4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC40.14■■■■■ 4.02
HFM1A2PYH4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC40.13■■■■■ 4.01
HFM1A2PYH4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
HFM1A2PYH4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC40.11■■■■■ 4.01
HFM1A2PYH4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
HFM1A2PYH4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC40.1■■■■■ 4.01
HFM1A2PYH4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
HFM1A2PYH4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC40.1■■■■■ 4.01
HFM1A2PYH4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC40.1■■■■■ 4.01
HFM1A2PYH4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC40.08■■■■■ 4.01
HFM1A2PYH4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
HFM1A2PYH4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC40.07■■■■■ 4
HFM1A2PYH4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC40.06■■■■■ 4
HFM1A2PYH4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC40.05■■■■■ 4
HFM1A2PYH4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.05■■■■■ 4
HFM1A2PYH4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC40.05■■■■■ 4
HFM1A2PYH4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC40.05■■■■■ 4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms