Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20■□□□□ 0.79
TRAV9-2A0A087WT02 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV9-2A0A087WT02 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
TRAV9-2A0A087WT02 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRAV9-2A0A087WT02 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV9-2A0A087WT02 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV9-2A0A087WT02 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TRAV9-2A0A087WT02 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV9-2A0A087WT02 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV9-2A0A087WT02 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV9-2A0A087WT02 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV9-2A0A087WT02 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-2A0A087WT02 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-2A0A087WT02 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-2A0A087WT02 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-2A0A087WT02 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-2A0A087WT02 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRAV9-2A0A087WT02 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV9-2A0A087WT02 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV9-2A0A087WT02 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV9-2A0A087WT02 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV9-2A0A087WT02 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV9-2A0A087WT02 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV9-2A0A087WT02 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV9-2A0A087WT02 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV9-2A0A087WT02 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV9-2A0A087WT02 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV9-2A0A087WT02 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV9-2A0A087WT02 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV9-2A0A087WT02 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRAV9-2A0A087WT02 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV9-2A0A087WT02 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV9-2A0A087WT02 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAV9-2A0A087WT02 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV9-2A0A087WT02 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV9-2A0A087WT02 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV9-2A0A087WT02 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV9-2A0A087WT02 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV9-2A0A087WT02 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV9-2A0A087WT02 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TRAV9-2A0A087WT02 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAV9-2A0A087WT02 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV9-2A0A087WT02 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV9-2A0A087WT02 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV9-2A0A087WT02 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV9-2A0A087WT02 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV9-2A0A087WT02 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV9-2A0A087WT02 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV9-2A0A087WT02 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV9-2A0A087WT02 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV9-2A0A087WT02 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV9-2A0A087WT02 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAV9-2A0A087WT02 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV9-2A0A087WT02 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV9-2A0A087WT02 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV9-2A0A087WT02 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAV9-2A0A087WT02 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV9-2A0A087WT02 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV9-2A0A087WT02 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV9-2A0A087WT02 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV9-2A0A087WT02 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV9-2A0A087WT02 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV9-2A0A087WT02 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV9-2A0A087WT02 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV9-2A0A087WT02 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRAV9-2A0A087WT02 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV9-2A0A087WT02 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV9-2A0A087WT02 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV9-2A0A087WT02 AP002365.1-201ENST00000603448 772 ntBASIC19.72■□□□□ 0.75
TRAV9-2A0A087WT02 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV9-2A0A087WT02 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV9-2A0A087WT02 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV9-2A0A087WT02 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV9-2A0A087WT02 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAV9-2A0A087WT02 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV9-2A0A087WT02 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV9-2A0A087WT02 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV9-2A0A087WT02 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV9-2A0A087WT02 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV9-2A0A087WT02 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV9-2A0A087WT02 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV9-2A0A087WT02 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV9-2A0A087WT02 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV9-2A0A087WT02 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV9-2A0A087WT02 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV9-2A0A087WT02 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV9-2A0A087WT02 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV9-2A0A087WT02 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV9-2A0A087WT02 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV9-2A0A087WT02 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAV9-2A0A087WT02 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV9-2A0A087WT02 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV9-2A0A087WT02 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV9-2A0A087WT02 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV9-2A0A087WT02 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV9-2A0A087WT02 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV9-2A0A087WT02 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV9-2A0A087WT02 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAV9-2A0A087WT02 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV9-2A0A087WT02 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms