Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.42■□□□□ 0.54
CD3DP04234 AC120024.1-201ENST00000562672 995 ntBASIC18.42■□□□□ 0.54
CD3DP04234 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD3DP04234 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD3DP04234 LINC01529-204ENST00000636474 1715 ntBASIC18.42■□□□□ 0.54
CD3DP04234 RNF126P1-201ENST00000567452 1320 ntBASIC18.42■□□□□ 0.54
CD3DP04234 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD3DP04234 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD3DP04234 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD3DP04234 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.42■□□□□ 0.54
CD3DP04234 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CD3DP04234 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CD3DP04234 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 FEM1AP4-201ENST00000443167 1987 ntBASIC18.41■□□□□ 0.54
CD3DP04234 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.41■□□□□ 0.54
CD3DP04234 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.41■□□□□ 0.54
CD3DP04234 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.41■□□□□ 0.54
CD3DP04234 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.41■□□□□ 0.54
CD3DP04234 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CD3DP04234 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CD3DP04234 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CD3DP04234 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD3DP04234 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CD3DP04234 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.4■□□□□ 0.54
CD3DP04234 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.4■□□□□ 0.54
CD3DP04234 AC019171.1-201ENST00000601251 1056 ntBASIC18.4■□□□□ 0.54
CD3DP04234 LINC01521-201ENST00000504184 1943 ntBASIC18.4■□□□□ 0.54
CD3DP04234 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CD3DP04234 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CD3DP04234 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
CD3DP04234 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD3DP04234 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CD3DP04234 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CD3DP04234 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
CD3DP04234 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.39■□□□□ 0.53
CD3DP04234 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.39■□□□□ 0.53
CD3DP04234 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.39■□□□□ 0.53
CD3DP04234 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.39■□□□□ 0.53
CD3DP04234 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD3DP04234 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD3DP04234 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.39■□□□□ 0.53
CD3DP04234 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD3DP04234 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.39■□□□□ 0.53
CD3DP04234 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD3DP04234 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.38■□□□□ 0.53
CD3DP04234 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.38■□□□□ 0.53
CD3DP04234 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CD3DP04234 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CD3DP04234 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
CD3DP04234 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD3DP04234 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD3DP04234 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.37■□□□□ 0.53
CD3DP04234 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CD3DP04234 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD3DP04234 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD3DP04234 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CD3DP04234 MIR4281-201ENST00000580852 62 ntBASIC18.37■□□□□ 0.53
CD3DP04234 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD3DP04234 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD3DP04234 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms