RNA–Protein interactions for RNA: ENST00000221566.6

SGTA-201, Transcript of small glutamine rich tetratricopeptide repeat containing alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGTA, Length 2,330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGTA-201ENST00000221566 NISCHQ9Y2I1 1504 aa44.93■■■■■ 4.78
SGTA-201ENST00000221566 CCDC180Q9P1Z9 1646 aa38.55■■■■□ 3.76
SGTA-201ENST00000221566 ZCCHC6Q5VYS8 1495 aaKnown RBP37.9■■■■□ 3.66
SGTA-201ENST00000221566 SHROOM4Q9ULL8 1493 aa37.69■■■■□ 3.62
SGTA-201ENST00000221566 DCAF8L2P0C7V8 631 aa37.21■■■■□ 3.55
SGTA-201ENST00000221566 DCAF1Q9Y4B6 1507 aa36.94■■■■□ 3.5
SGTA-201ENST00000221566 SUPT5HO00267 1087 aaKnown RBP36.66■■■■□ 3.46
SGTA-201ENST00000221566 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
SGTA-201ENST00000221566 ABCC9O60706 1549 aa36.09■■■■□ 3.37
SGTA-201ENST00000221566 SCRIBQ14160 1630 aa35.91■■■■□ 3.34
SGTA-201ENST00000221566 NACADO15069 1562 aa35.75■■■■□ 3.31
SGTA-201ENST00000221566 CHIC1Q5VXU3 224 aa35.44■■■■□ 3.26
SGTA-201ENST00000221566 RSF1Q96T23 1441 aaPredicted RBP35.29■■■■□ 3.24
SGTA-201ENST00000221566 RB1CC1Q8TDY2 1594 aa35.28■■■■□ 3.24
SGTA-201ENST00000221566 CECR2Q9BXF3 1484 aa35.05■■■■□ 3.2
SGTA-201ENST00000221566 MROH2BQ7Z745 1585 aa34.88■■■■□ 3.17
SGTA-201ENST00000221566 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
SGTA-201ENST00000221566 WIZO95785 1651 aa34.65■■■■□ 3.14
SGTA-201ENST00000221566 BAZ1AQ9NRL2 1556 aaPredicted RBP34.56■■■■□ 3.12
SGTA-201ENST00000221566 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
SGTA-201ENST00000221566 SMARCA4P51532 1647 aa34.35■■■■□ 3.09
SGTA-201ENST00000221566 PABPN1Q86U42 306 aaKnown RBP eCLIP34.34■■■■□ 3.09
SGTA-201ENST00000221566 LOC105371045A0A1W2PR82 267 aa34.3■■■■□ 3.08
SGTA-201ENST00000221566 TRIM41Q8WV44 630 aa34.24■■■■□ 3.07
SGTA-201ENST00000221566 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
SGTA-201ENST00000221566 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
SGTA-201ENST00000221566 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.02
SGTA-201ENST00000221566 SMARCA2P51531 1590 aa33.93■■■■□ 3.02
SGTA-201ENST00000221566 FAM9AQ8IZU1 332 aaPredicted RBP33.87■■■■□ 3.01
SGTA-201ENST00000221566 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
SGTA-201ENST00000221566 ABCC8Q09428 1581 aa33.62■■■□□ 2.97
SGTA-201ENST00000221566 PCGF6Q9BYE7 350 aa33.62■■■□□ 2.97
SGTA-201ENST00000221566 ATAD2BQ9ULI0 1458 aa33.61■■■□□ 2.97
SGTA-201ENST00000221566 EHMT2Q96KQ7 1210 aa33.53■■■□□ 2.96
SGTA-201ENST00000221566 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
SGTA-201ENST00000221566 HRCP23327 699 aa33.24■■■□□ 2.91
SGTA-201ENST00000221566 SOGA1O94964 1423 aa33.18■■■□□ 2.9
SGTA-201ENST00000221566 TRIM26Q12899 539 aaPredicted RBP33.18■■■□□ 2.9
SGTA-201ENST00000221566 WRNQ14191 1432 aaPredicted RBP eCLIP33.16■■■□□ 2.96e-6■■■□□ 16.7
SGTA-201ENST00000221566 NCAPD3P42695 1498 aa33.08■■■□□ 2.89
SGTA-201ENST00000221566 RUSC2Q8N2Y8 1516 aa33.06■■■□□ 2.88
SGTA-201ENST00000221566 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
SGTA-201ENST00000221566 SYNJ1O43426 1573 aa33.04■■■□□ 2.88
SGTA-201ENST00000221566 EEA1Q15075 1411 aa32.96■■■□□ 2.87
SGTA-201ENST00000221566 CSRNP3Q8WYN3 585 aa32.93■■■□□ 2.86
SGTA-201ENST00000221566 TNIKQ9UKE5 1360 aa32.76■■■□□ 2.84
SGTA-201ENST00000221566 CEP162Q5TB80 1403 aa32.75■■■□□ 2.83
SGTA-201ENST00000221566 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
SGTA-201ENST00000221566 TOP2BQ02880 1626 aa32.71■■■□□ 2.83
SGTA-201ENST00000221566 GOLGA3Q08378 1498 aa32.68■■■□□ 2.82
SGTA-201ENST00000221566 UBTFP17480 764 aaKnown RBP32.68■■■□□ 2.82
SGTA-201ENST00000221566 CFTRP13569 1480 aa32.64■■■□□ 2.82
SGTA-201ENST00000221566 BIVM-ERCC5R4GMW8 1640 aa32.61■■■□□ 2.81
SGTA-201ENST00000221566 CEP164Q9UPV0 1460 aa32.58■■■□□ 2.81
SGTA-201ENST00000221566 KIF21BO75037 1637 aa32.56■■■□□ 2.8
SGTA-201ENST00000221566 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
SGTA-201ENST00000221566 CUX1P39880 1505 aa32.52■■■□□ 2.8
SGTA-201ENST00000221566 RAPGEF2Q9Y4G8 1499 aa32.42■■■□□ 2.78
SGTA-201ENST00000221566 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
SGTA-201ENST00000221566 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
SGTA-201ENST00000221566 TTBK1Q5TCY1 1321 aaPredicted RBP32.31■■■□□ 2.76
SGTA-201ENST00000221566 CLIP1P30622 1438 aa32.27■■■□□ 2.76
SGTA-201ENST00000221566 PRXQ9BXM0 1461 aa32.22■■■□□ 2.75
SGTA-201ENST00000221566 KIF27Q86VH2 1401 aa32.19■■■□□ 2.74
SGTA-201ENST00000221566 ZEB1P37275 1124 aaPredicted RBP32.16■■■□□ 2.74
SGTA-201ENST00000221566 ERICH3Q5RHP9 1530 aa32.15■■■□□ 2.74
SGTA-201ENST00000221566 RANGAP1P46060 587 aaPredicted RBP32.12■■■□□ 2.73
SGTA-201ENST00000221566 VPS8Q8N3P4 1428 aa32.06■■■□□ 2.72
SGTA-201ENST00000221566 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
SGTA-201ENST00000221566 FGD5Q6ZNL6 1462 aa32.02■■■□□ 2.72
SGTA-201ENST00000221566 CUX2O14529 1486 aa32■■■□□ 2.71
SGTA-201ENST00000221566 NESP48681 1621 aa32■■■□□ 2.71
SGTA-201ENST00000221566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.95■■■□□ 2.71
SGTA-201ENST00000221566 IGF1RP08069 1367 aa31.91■■■□□ 2.7
SGTA-201ENST00000221566 ARAP1Q96P48 1450 aa31.86■■■□□ 2.69
SGTA-201ENST00000221566 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
SGTA-201ENST00000221566 DNMBPQ6XZF7 1577 aa31.82■■■□□ 2.68
SGTA-201ENST00000221566 CCER1Q8TC90 406 aaPredicted RBP31.82■■■□□ 2.68
SGTA-201ENST00000221566 APLP2Q06481 763 aa31.8■■■□□ 2.68
SGTA-201ENST00000221566 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
SGTA-201ENST00000221566 LAMC3Q9Y6N6 1575 aa31.76■■■□□ 2.67
SGTA-201ENST00000221566 RAD54L2Q9Y4B4 1467 aa31.75■■■□□ 2.67
SGTA-201ENST00000221566 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
SGTA-201ENST00000221566 POLA1P09884 1462 aaPredicted RBP31.73■■■□□ 2.67
SGTA-201ENST00000221566 ARHGAP35Q9NRY4 1499 aa31.69■■■□□ 2.66
SGTA-201ENST00000221566 ABCA10Q8WWZ4 1543 aa31.66■■■□□ 2.66
SGTA-201ENST00000221566 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.65
SGTA-201ENST00000221566 HNRNPUL2Q1KMD3 747 aaKnown RBP31.58■■■□□ 2.65
SGTA-201ENST00000221566 KANK4Q5T7N3 995 aaPredicted RBP31.55■■■□□ 2.64
SGTA-201ENST00000221566 PDS5BQ9NTI5 1447 aa31.54■■■□□ 2.64
SGTA-201ENST00000221566 KIF21AQ7Z4S6 1674 aa31.47■■■□□ 2.63
SGTA-201ENST00000221566 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
SGTA-201ENST00000221566 CUL7Q14999 1698 aa31.38■■■□□ 2.61
SGTA-201ENST00000221566 TDRD9Q8NDG6 1382 aaKnown RBP31.38■■■□□ 2.61
SGTA-201ENST00000221566 ABCA5Q8WWZ7 1642 aa31.33■■■□□ 2.61
SGTA-201ENST00000221566 P3H3Q8IVL6 736 aa31.3■■■□□ 2.6
SGTA-201ENST00000221566 GAPVD1Q14C86 1478 aa31.28■■■□□ 2.6
SGTA-201ENST00000221566 RRBP1Q9P2E9 1410 aaKnown RBP31.24■■■□□ 2.59
SGTA-201ENST00000221566 TIAM1Q13009 1591 aa31.23■■■□□ 2.59
SGTA-201ENST00000221566 CTTNBP2Q8WZ74 1663 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms