RNA–Protein interactions for RNA: ENST00000374263.7

SUSD1-202, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SUSD1, Length 2,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-202ENST00000374263 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
SUSD1-202ENST00000374263 SHROOM4Q9ULL8 1493 aa35.75■■■■□ 3.31
SUSD1-202ENST00000374263 DCAF8L2P0C7V8 631 aa35.4■■■■□ 3.26
SUSD1-202ENST00000374263 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
SUSD1-202ENST00000374263 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
SUSD1-202ENST00000374263 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
SUSD1-202ENST00000374263 HRCP23327 699 aa33.9■■■■□ 3.02
SUSD1-202ENST00000374263 PCGF6Q9BYE7 350 aa33.47■■■□□ 2.95
SUSD1-202ENST00000374263 MYO15BQ96JP2 1530 aa33.45■■■□□ 2.95
SUSD1-202ENST00000374263 ABCC9O60706 1549 aa33.41■■■□□ 2.94
SUSD1-202ENST00000374263 PPARGC1BQ86YN6 1023 aaKnown RBP33.4■■■□□ 2.94
SUSD1-202ENST00000374263 DCAF1Q9Y4B6 1507 aa33.35■■■□□ 2.93
SUSD1-202ENST00000374263 CHIC1Q5VXU3 224 aa33.32■■■□□ 2.92
SUSD1-202ENST00000374263 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
SUSD1-202ENST00000374263 LOC105371045A0A1W2PR82 267 aa32.67■■■□□ 2.82
SUSD1-202ENST00000374263 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
SUSD1-202ENST00000374263 EHMT2Q96KQ7 1210 aa32.5■■■□□ 2.79
SUSD1-202ENST00000374263 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
SUSD1-202ENST00000374263 NACADO15069 1562 aa32.42■■■□□ 2.78
SUSD1-202ENST00000374263 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
SUSD1-202ENST00000374263 TRIM26Q12899 539 aaPredicted RBP32.31■■■□□ 2.76
SUSD1-202ENST00000374263 TRIM41Q8WV44 630 aa32.29■■■□□ 2.76
SUSD1-202ENST00000374263 RB1CC1Q8TDY2 1594 aa32.22■■■□□ 2.75
SUSD1-202ENST00000374263 PABPN1Q86U42 306 aaKnown RBP eCLIP32.17■■■□□ 2.74
SUSD1-202ENST00000374263 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
SUSD1-202ENST00000374263 PELP1Q8IZL8 1130 aaKnown RBP32.13■■■□□ 2.73
SUSD1-202ENST00000374263 SCAF1Q9H7N4 1312 aaKnown RBP31.99■■■□□ 2.71
SUSD1-202ENST00000374263 WIZO95785 1651 aa31.94■■■□□ 2.7
SUSD1-202ENST00000374263 ZEB1P37275 1124 aaPredicted RBP31.87■■■□□ 2.69
SUSD1-202ENST00000374263 BAZ1AQ9NRL2 1556 aaPredicted RBP31.59■■■□□ 2.65
SUSD1-202ENST00000374263 UNC13AQ9UPW8 1703 aa31.47■■■□□ 2.63
SUSD1-202ENST00000374263 SMARCA4P51532 1647 aa31.37■■■□□ 2.61
SUSD1-202ENST00000374263 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
SUSD1-202ENST00000374263 ABCC8Q09428 1581 aa31.29■■■□□ 2.6
SUSD1-202ENST00000374263 TTBK1Q5TCY1 1321 aaPredicted RBP31.27■■■□□ 2.6
SUSD1-202ENST00000374263 ACIN1Q9UKV3 1341 aaKnown RBP31.24■■■□□ 2.59
SUSD1-202ENST00000374263 NEUROD1Q13562 356 aa31.23■■■□□ 2.59
SUSD1-202ENST00000374263 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
SUSD1-202ENST00000374263 TOP2AP11388 1531 aaKnown RBP31.21■■■□□ 2.59
SUSD1-202ENST00000374263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.13■■■□□ 2.57
SUSD1-202ENST00000374263 SMARCA2P51531 1590 aa31.1■■■□□ 2.57
SUSD1-202ENST00000374263 GTF3C3Q9Y5Q9 886 aa31.05■■■□□ 2.56
SUSD1-202ENST00000374263 CCER1Q8TC90 406 aaPredicted RBP31.01■■■□□ 2.55
SUSD1-202ENST00000374263 SOGA1O94964 1423 aa30.98■■■□□ 2.55
SUSD1-202ENST00000374263 UBTFP17480 764 aaKnown RBP30.96■■■□□ 2.55
SUSD1-202ENST00000374263 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
SUSD1-202ENST00000374263 RANGAP1P46060 587 aaPredicted RBP30.9■■■□□ 2.54
SUSD1-202ENST00000374263 DIEXFQ68CQ4 756 aaKnown RBP30.89■■■□□ 2.54
SUSD1-202ENST00000374263 RUSC2Q8N2Y8 1516 aa30.85■■■□□ 2.53
SUSD1-202ENST00000374263 CENPBP07199 599 aaPredicted RBP30.85■■■□□ 2.53
SUSD1-202ENST00000374263 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
SUSD1-202ENST00000374263 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
SUSD1-202ENST00000374263 CSRNP3Q8WYN3 585 aa30.78■■■□□ 2.52
SUSD1-202ENST00000374263 MYT1Q01538 1121 aa30.72■■■□□ 2.51
SUSD1-202ENST00000374263 WRNQ14191 1432 aaPredicted RBP eCLIP30.7■■■□□ 2.51
SUSD1-202ENST00000374263 CEP162Q5TB80 1403 aa30.55■■■□□ 2.48
SUSD1-202ENST00000374263 YTHDC1Q96MU7 727 aaKnown RBP30.51■■■□□ 2.47
SUSD1-202ENST00000374263 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
SUSD1-202ENST00000374263 SYNJ1O43426 1573 aa30.45■■■□□ 2.46
SUSD1-202ENST00000374263 TNIKQ9UKE5 1360 aa30.36■■■□□ 2.45
SUSD1-202ENST00000374263 ZNF316A6NFI3 1004 aaPredicted RBP30.31■■■□□ 2.44
SUSD1-202ENST00000374263 EEA1Q15075 1411 aa30.28■■■□□ 2.44
SUSD1-202ENST00000374263 GOLGA3Q08378 1498 aa30.27■■■□□ 2.44
SUSD1-202ENST00000374263 MIER1Q8N108 512 aa30.16■■■□□ 2.42
SUSD1-202ENST00000374263 RAPGEF2Q9Y4G8 1499 aa30.16■■■□□ 2.42
SUSD1-202ENST00000374263 HNRNPUL2Q1KMD3 747 aaKnown RBP30.14■■■□□ 2.41
SUSD1-202ENST00000374263 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
SUSD1-202ENST00000374263 CEP164Q9UPV0 1460 aa30.11■■■□□ 2.41
SUSD1-202ENST00000374263 CLIP1P30622 1438 aa30.1■■■□□ 2.41
SUSD1-202ENST00000374263 APLP2Q06481 763 aa30.09■■■□□ 2.41
SUSD1-202ENST00000374263 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
SUSD1-202ENST00000374263 TOP2BQ02880 1626 aa29.91■■■□□ 2.38
SUSD1-202ENST00000374263 CUX1P39880 1505 aa29.9■■■□□ 2.38
SUSD1-202ENST00000374263 CFTRP13569 1480 aa29.84■■■□□ 2.37
SUSD1-202ENST00000374263 KIF21BO75037 1637 aa29.82■■■□□ 2.36
SUSD1-202ENST00000374263 KIF27Q86VH2 1401 aa29.76■■■□□ 2.35
SUSD1-202ENST00000374263 VPS8Q8N3P4 1428 aa29.76■■■□□ 2.35
SUSD1-202ENST00000374263 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
SUSD1-202ENST00000374263 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
SUSD1-202ENST00000374263 CC2D2AQ9P2K1 1620 aa29.72■■■□□ 2.35
SUSD1-202ENST00000374263 P3H3Q8IVL6 736 aa29.7■■■□□ 2.34
SUSD1-202ENST00000374263 CUX2O14529 1486 aa29.69■■■□□ 2.34
SUSD1-202ENST00000374263 KANK4Q5T7N3 995 aaPredicted RBP29.68■■■□□ 2.34
SUSD1-202ENST00000374263 ATP1B4Q9UN42 357 aaPredicted RBP29.68■■■□□ 2.34
SUSD1-202ENST00000374263 ITGAEP38570 1179 aa29.67■■■□□ 2.34
SUSD1-202ENST00000374263 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
SUSD1-202ENST00000374263 PRXQ9BXM0 1461 aa29.64■■■□□ 2.33
SUSD1-202ENST00000374263 NESP48681 1621 aa29.6■■■□□ 2.33
SUSD1-202ENST00000374263 SUPT16HQ9Y5B9 1047 aaKnown RBP29.56■■■□□ 2.32
SUSD1-202ENST00000374263 FGD5Q6ZNL6 1462 aa29.53■■■□□ 2.32
SUSD1-202ENST00000374263 IGF1RP08069 1367 aa29.52■■■□□ 2.32
SUSD1-202ENST00000374263 ARAP1Q96P48 1450 aa29.51■■■□□ 2.32
SUSD1-202ENST00000374263 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
SUSD1-202ENST00000374263 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.31
SUSD1-202ENST00000374263 CARMIL1Q5VZK9 1371 aa29.45■■■□□ 2.31
SUSD1-202ENST00000374263 ERICH3Q5RHP9 1530 aa29.41■■■□□ 2.3
SUSD1-202ENST00000374263 TSHZ2Q9NRE2 1034 aa29.37■■■□□ 2.29
SUSD1-202ENST00000374263 ARHGAP35Q9NRY4 1499 aa29.34■■■□□ 2.29
SUSD1-202ENST00000374263 CLSPNQ9HAW4 1339 aa29.28■■■□□ 2.28
SUSD1-202ENST00000374263 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms