RNA–Protein interactions for RNA: ENST00000296615.10

RNF180-201, Transcript of ring finger protein 180, humanhuman

TSL 1 (best) BASIC

Gene RNF180, Length 1,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180-201ENST00000296615 NISCHQ9Y2I1 1504 aa48.86■■■■■ 5.41
RNF180-201ENST00000296615 CCDC180Q9P1Z9 1646 aa42.55■■■■■ 4.4
RNF180-201ENST00000296615 ZCCHC6Q5VYS8 1495 aaKnown RBP41.03■■■■■ 4.16
RNF180-201ENST00000296615 DCAF1Q9Y4B6 1507 aa40.42■■■■■ 4.06
RNF180-201ENST00000296615 DCAF8L2P0C7V8 631 aa40.33■■■■■ 4.05
RNF180-201ENST00000296615 ABCC9O60706 1549 aa40.28■■■■■ 4.04
RNF180-201ENST00000296615 MYO15BQ96JP2 1530 aa39.96■■■■□ 3.99
RNF180-201ENST00000296615 SHROOM4Q9ULL8 1493 aa39.8■■■■□ 3.96
RNF180-201ENST00000296615 NACADO15069 1562 aa39.68■■■■□ 3.94
RNF180-201ENST00000296615 RB1CC1Q8TDY2 1594 aa39.32■■■■□ 3.89
RNF180-201ENST00000296615 SCRIBQ14160 1630 aa39.12■■■■□ 3.85
RNF180-201ENST00000296615 UNC13AQ9UPW8 1703 aa38.42■■■■□ 3.74
RNF180-201ENST00000296615 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.72
RNF180-201ENST00000296615 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
RNF180-201ENST00000296615 PABPN1Q86U42 306 aaKnown RBP eCLIP38.01■■■■□ 3.67
RNF180-201ENST00000296615 CECR2Q9BXF3 1484 aa37.96■■■■□ 3.67
RNF180-201ENST00000296615 RSF1Q96T23 1441 aaPredicted RBP37.91■■■■□ 3.66
RNF180-201ENST00000296615 MROH2BQ7Z745 1585 aa37.73■■■■□ 3.63
RNF180-201ENST00000296615 BAZ1AQ9NRL2 1556 aaPredicted RBP37.71■■■■□ 3.63
RNF180-201ENST00000296615 SMARCA4P51532 1647 aa37.52■■■■□ 3.6
RNF180-201ENST00000296615 WIZO95785 1651 aa37.37■■■■□ 3.57
RNF180-201ENST00000296615 PEG3Q9GZU2 1588 aa37.1■■■■□ 3.53
RNF180-201ENST00000296615 TOP2AP11388 1531 aaKnown RBP37.03■■■■□ 3.52
RNF180-201ENST00000296615 EIF4G1Q04637 1599 aaKnown RBP36.99■■■■□ 3.51
RNF180-201ENST00000296615 ATAD2BQ9ULI0 1458 aa36.95■■■■□ 3.51
RNF180-201ENST00000296615 SMARCA2P51531 1590 aa36.91■■■■□ 3.5
RNF180-201ENST00000296615 BAZ1BQ9UIG0 1483 aaKnown RBP36.73■■■■□ 3.47
RNF180-201ENST00000296615 CHIC1Q5VXU3 224 aa36.71■■■■□ 3.47
RNF180-201ENST00000296615 CCDC88BA6NC98 1476 aa36.67■■■■□ 3.46
RNF180-201ENST00000296615 NCAPD3P42695 1498 aa36.66■■■■□ 3.46
RNF180-201ENST00000296615 HMGXB3Q12766 1538 aa36.57■■■■□ 3.44
RNF180-201ENST00000296615 CC2D2AQ9P2K1 1620 aa36.43■■■■□ 3.42
RNF180-201ENST00000296615 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
RNF180-201ENST00000296615 ABCC8Q09428 1581 aa35.84■■■■□ 3.33
RNF180-201ENST00000296615 CFTRP13569 1480 aa35.83■■■■□ 3.33
RNF180-201ENST00000296615 CADPSQ9ULU8 1353 aa35.72■■■■□ 3.31
RNF180-201ENST00000296615 WRNQ14191 1432 aaPredicted RBP eCLIP35.68■■■■□ 3.3
RNF180-201ENST00000296615 DNAJC5BQ9UF47 199 aa35.56■■■■□ 3.28
RNF180-201ENST00000296615 PRDM2Q13029 1718 aa35.5■■■■□ 3.27
RNF180-201ENST00000296615 SYNJ1O43426 1573 aa35.48■■■■□ 3.27
RNF180-201ENST00000296615 LAMC3Q9Y6N6 1575 aa35.37■■■■□ 3.25
RNF180-201ENST00000296615 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
RNF180-201ENST00000296615 NESP48681 1621 aa35.35■■■■□ 3.25
RNF180-201ENST00000296615 TOP2BQ02880 1626 aa35.35■■■■□ 3.25
RNF180-201ENST00000296615 BIVM-ERCC5R4GMW8 1640 aa35.3■■■■□ 3.24
RNF180-201ENST00000296615 FANCD2Q9BXW9 1451 aa35.3■■■■□ 3.24
RNF180-201ENST00000296615 CUX1P39880 1505 aa35.28■■■■□ 3.24
RNF180-201ENST00000296615 LOC105371045A0A1W2PR82 267 aa35.28■■■■□ 3.24
RNF180-201ENST00000296615 SOGA1O94964 1423 aa35.22■■■■□ 3.23
RNF180-201ENST00000296615 EEA1Q15075 1411 aa35.19■■■■□ 3.22
RNF180-201ENST00000296615 PDS5BQ9NTI5 1447 aa35.14■■■■□ 3.22
RNF180-201ENST00000296615 CEP164Q9UPV0 1460 aa35.07■■■■□ 3.2
RNF180-201ENST00000296615 RUSC2Q8N2Y8 1516 aa35.07■■■■□ 3.2
RNF180-201ENST00000296615 CSRNP3Q8WYN3 585 aa35.01■■■■□ 3.19
RNF180-201ENST00000296615 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
RNF180-201ENST00000296615 TOPBP1Q92547 1522 aa34.91■■■■□ 3.18
RNF180-201ENST00000296615 FGD5Q6ZNL6 1462 aa34.9■■■■□ 3.18
RNF180-201ENST00000296615 KIF21AQ7Z4S6 1674 aa34.85■■■■□ 3.17
RNF180-201ENST00000296615 URB2Q14146 1524 aaKnown RBP34.85■■■■□ 3.17
RNF180-201ENST00000296615 EHMT2Q96KQ7 1210 aa34.83■■■■□ 3.17
RNF180-201ENST00000296615 KIF27Q86VH2 1401 aa34.79■■■■□ 3.16
RNF180-201ENST00000296615 POLA1P09884 1462 aaPredicted RBP34.74■■■■□ 3.15
RNF180-201ENST00000296615 CUX2O14529 1486 aa34.68■■■■□ 3.14
RNF180-201ENST00000296615 KIF21BO75037 1637 aa34.67■■■■□ 3.14
RNF180-201ENST00000296615 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
RNF180-201ENST00000296615 MRC2Q9UBG0 1479 aa34.67■■■■□ 3.14
RNF180-201ENST00000296615 RAD54L2Q9Y4B4 1467 aa34.62■■■■□ 3.13
RNF180-201ENST00000296615 ABCA10Q8WWZ4 1543 aa34.61■■■■□ 3.13
RNF180-201ENST00000296615 TNIKQ9UKE5 1360 aa34.59■■■■□ 3.13
RNF180-201ENST00000296615 PRXQ9BXM0 1461 aa34.55■■■■□ 3.12
RNF180-201ENST00000296615 ERCC6Q03468 1493 aa34.53■■■■□ 3.12
RNF180-201ENST00000296615 UBTFP17480 764 aaKnown RBP34.52■■■■□ 3.12
RNF180-201ENST00000296615 IGF1RP08069 1367 aa34.5■■■■□ 3.11
RNF180-201ENST00000296615 RAPGEF2Q9Y4G8 1499 aa34.49■■■■□ 3.11
RNF180-201ENST00000296615 WDR62O43379 1518 aa34.47■■■■□ 3.11
RNF180-201ENST00000296615 ERICH3Q5RHP9 1530 aa34.46■■■■□ 3.11
RNF180-201ENST00000296615 WDR97A6NE52 1622 aa34.42■■■■□ 3.1
RNF180-201ENST00000296615 CEP162Q5TB80 1403 aa34.37■■■■□ 3.09
RNF180-201ENST00000296615 TARBP1Q13395 1621 aaKnown RBP34.36■■■■□ 3.09
RNF180-201ENST00000296615 THOC2Q8NI27 1593 aaKnown RBP34.33■■■■□ 3.09
RNF180-201ENST00000296615 CARMIL1Q5VZK9 1371 aa34.32■■■■□ 3.08
RNF180-201ENST00000296615 TDRD9Q8NDG6 1382 aaKnown RBP34.3■■■■□ 3.08
RNF180-201ENST00000296615 ABCA5Q8WWZ7 1642 aa34.29■■■■□ 3.08
RNF180-201ENST00000296615 IFT140Q96RY7 1462 aa34.26■■■■□ 3.07
RNF180-201ENST00000296615 GAPVD1Q14C86 1478 aa34.25■■■■□ 3.07
RNF180-201ENST00000296615 CUL7Q14999 1698 aa34.16■■■■□ 3.06
RNF180-201ENST00000296615 CLIP1P30622 1438 aa34.12■■■■□ 3.05
RNF180-201ENST00000296615 AQRO60306 1485 aaKnown RBP eCLIP34.07■■■■□ 3.05
RNF180-201ENST00000296615 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
RNF180-201ENST00000296615 GRIN2BQ13224 1484 aa34■■■■□ 3.03
RNF180-201ENST00000296615 PBRM1Q86U86 1689 aa33.97■■■■□ 3.03
RNF180-201ENST00000296615 RANGAP1P46060 587 aaPredicted RBP33.92■■■■□ 3.02
RNF180-201ENST00000296615 FHAD1B1AJZ9 1412 aa33.91■■■■□ 3.02
RNF180-201ENST00000296615 EIF4G3O43432 1585 aaKnown RBP33.88■■■■□ 3.01
RNF180-201ENST00000296615 ADAMTS12P58397 1594 aa33.85■■■■□ 3.01
RNF180-201ENST00000296615 VPS8Q8N3P4 1428 aa33.82■■■■□ 3
RNF180-201ENST00000296615 ARAP1Q96P48 1450 aa33.78■■■■□ 3
RNF180-201ENST00000296615 ARHGAP35Q9NRY4 1499 aa33.78■■■■□ 3
RNF180-201ENST00000296615 SNAPC4Q5SXM2 1469 aa33.75■■■□□ 2.99
RNF180-201ENST00000296615 CTTNBP2Q8WZ74 1663 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms