RNA–Protein interactions for RNA: ENST00000379751.4

CENPB-201, Transcript of centromere protein B, humanhuman

APPRIS P1 BASIC

Gene CENPB, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPB-201ENST00000379751 NISCHQ9Y2I1 1504 aa47.24■■■■■ 5.15
CENPB-201ENST00000379751 CCDC180Q9P1Z9 1646 aa40.92■■■■■ 4.14
CENPB-201ENST00000379751 ZCCHC6Q5VYS8 1495 aaKnown RBP39.73■■■■□ 3.95
CENPB-201ENST00000379751 DCAF8L2P0C7V8 631 aa39.32■■■■□ 3.88
CENPB-201ENST00000379751 SHROOM4Q9ULL8 1493 aa39.09■■■■□ 3.85
CENPB-201ENST00000379751 DCAF1Q9Y4B6 1507 aa38.92■■■■□ 3.82
CENPB-201ENST00000379751 ABCC9O60706 1549 aa38.75■■■■□ 3.79
CENPB-201ENST00000379751 MYO15BQ96JP2 1530 aa38.31■■■■□ 3.72
CENPB-201ENST00000379751 NACADO15069 1562 aa38.1■■■■□ 3.69
CENPB-201ENST00000379751 SCRIBQ14160 1630 aa37.92■■■■□ 3.66
CENPB-201ENST00000379751 SUPT5HO00267 1087 aaKnown RBP37.76■■■■□ 3.63
CENPB-201ENST00000379751 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.63
CENPB-201ENST00000379751 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
CENPB-201ENST00000379751 RSF1Q96T23 1441 aaPredicted RBP36.82■■■■□ 3.49
CENPB-201ENST00000379751 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
CENPB-201ENST00000379751 PABPN1Q86U42 306 aaKnown RBP eCLIP36.69■■■■□ 3.46
CENPB-201ENST00000379751 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
CENPB-201ENST00000379751 MROH2BQ7Z745 1585 aa36.58■■■■□ 3.45
CENPB-201ENST00000379751 BAZ1AQ9NRL2 1556 aaPredicted RBP36.45■■■■□ 3.43
CENPB-201ENST00000379751 WIZO95785 1651 aa36.3■■■■□ 3.4
CENPB-201ENST00000379751 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
CENPB-201ENST00000379751 CHIC1Q5VXU3 224 aa36.14■■■■□ 3.38
CENPB-201ENST00000379751 TOP2AP11388 1531 aaKnown RBP35.85■■■■□ 3.33
CENPB-201ENST00000379751 PEG3Q9GZU2 1588 aa35.69■■■■□ 3.3
CENPB-201ENST00000379751 ATAD2BQ9ULI0 1458 aa35.62■■■■□ 3.29
CENPB-201ENST00000379751 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
CENPB-201ENST00000379751 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
CENPB-201ENST00000379751 EIF4G1Q04637 1599 aaKnown RBP35.53■■■■□ 3.28
CENPB-201ENST00000379751 BAZ1BQ9UIG0 1483 aaKnown RBP35.48■■■■□ 3.27
CENPB-201ENST00000379751 TRIM41Q8WV44 630 aa35.38■■■■□ 3.25
CENPB-201ENST00000379751 NCAPD3P42695 1498 aa35.2■■■■□ 3.23
CENPB-201ENST00000379751 HMGXB3Q12766 1538 aa35.15■■■■□ 3.22
CENPB-201ENST00000379751 ABCC8Q09428 1581 aa34.99■■■■□ 3.19
CENPB-201ENST00000379751 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.19
CENPB-201ENST00000379751 LOC105371045A0A1W2PR82 267 aa34.9■■■■□ 3.18
CENPB-201ENST00000379751 FAM9AQ8IZU1 332 aaPredicted RBP34.9■■■■□ 3.18
CENPB-201ENST00000379751 WRNQ14191 1432 aaPredicted RBP eCLIP34.68■■■■□ 3.14
CENPB-201ENST00000379751 CFTRP13569 1480 aa34.53■■■■□ 3.12
CENPB-201ENST00000379751 EHMT2Q96KQ7 1210 aa34.52■■■■□ 3.12
CENPB-201ENST00000379751 SYNJ1O43426 1573 aa34.5■■■■□ 3.11
CENPB-201ENST00000379751 SOGA1O94964 1423 aa34.41■■■■□ 3.1
CENPB-201ENST00000379751 CADPSQ9ULU8 1353 aa34.4■■■■□ 3.1
CENPB-201ENST00000379751 TOP2BQ02880 1626 aa34.27■■■■□ 3.08
CENPB-201ENST00000379751 RUSC2Q8N2Y8 1516 aa34.26■■■■□ 3.07
CENPB-201ENST00000379751 PRDM2Q13029 1718 aa34.24■■■■□ 3.07
CENPB-201ENST00000379751 EEA1Q15075 1411 aa34.24■■■■□ 3.07
CENPB-201ENST00000379751 BIVM-ERCC5R4GMW8 1640 aa34.18■■■■□ 3.06
CENPB-201ENST00000379751 DNAJC5BQ9UF47 199 aa34.17■■■■□ 3.06
CENPB-201ENST00000379751 CUX1P39880 1505 aa34.17■■■■□ 3.06
CENPB-201ENST00000379751 CSRNP3Q8WYN3 585 aa34.17■■■■□ 3.06
CENPB-201ENST00000379751 NESP48681 1621 aa34.09■■■■□ 3.05
CENPB-201ENST00000379751 FANCD2Q9BXW9 1451 aa34.05■■■■□ 3.04
CENPB-201ENST00000379751 LAMC3Q9Y6N6 1575 aa33.95■■■■□ 3.03
CENPB-201ENST00000379751 UBTFP17480 764 aaKnown RBP33.88■■■■□ 3.01
CENPB-201ENST00000379751 GOLGA3Q08378 1498 aa33.86■■■■□ 3.01
CENPB-201ENST00000379751 CEP164Q9UPV0 1460 aa33.82■■■■□ 3.01
CENPB-201ENST00000379751 TNIKQ9UKE5 1360 aa33.79■■■■□ 3
CENPB-201ENST00000379751 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
CENPB-201ENST00000379751 KIF21BO75037 1637 aa33.77■■■■□ 3
CENPB-201ENST00000379751 KIF27Q86VH2 1401 aa33.77■■■■□ 3
CENPB-201ENST00000379751 PDS5BQ9NTI5 1447 aa33.76■■■□□ 2.99
CENPB-201ENST00000379751 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
CENPB-201ENST00000379751 CEP162Q5TB80 1403 aa33.71■■■□□ 2.99
CENPB-201ENST00000379751 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
CENPB-201ENST00000379751 RAPGEF2Q9Y4G8 1499 aa33.67■■■□□ 2.98
CENPB-201ENST00000379751 CUX2O14529 1486 aa33.66■■■□□ 2.98
CENPB-201ENST00000379751 PCGF6Q9BYE7 350 aa33.64■■■□□ 2.98
CENPB-201ENST00000379751 URB2Q14146 1524 aaKnown RBP33.59■■■□□ 2.97
CENPB-201ENST00000379751 KIF21AQ7Z4S6 1674 aa33.57■■■□□ 2.97
CENPB-201ENST00000379751 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
CENPB-201ENST00000379751 PRXQ9BXM0 1461 aa33.56■■■□□ 2.96
CENPB-201ENST00000379751 RAD54L2Q9Y4B4 1467 aa33.52■■■□□ 2.96
CENPB-201ENST00000379751 ERICH3Q5RHP9 1530 aa33.49■■■□□ 2.95
CENPB-201ENST00000379751 IGF1RP08069 1367 aa33.43■■■□□ 2.94
CENPB-201ENST00000379751 TRIM26Q12899 539 aaPredicted RBP33.43■■■□□ 2.94
CENPB-201ENST00000379751 ABCA10Q8WWZ4 1543 aa33.41■■■□□ 2.94
CENPB-201ENST00000379751 RANGAP1P46060 587 aaPredicted RBP33.41■■■□□ 2.94
CENPB-201ENST00000379751 CLIP1P30622 1438 aa33.39■■■□□ 2.94
CENPB-201ENST00000379751 PPARGC1BQ86YN6 1023 aaKnown RBP33.36■■■□□ 2.93
CENPB-201ENST00000379751 CARMIL1Q5VZK9 1371 aa33.3■■■□□ 2.92
CENPB-201ENST00000379751 MRC2Q9UBG0 1479 aa33.29■■■□□ 2.92
CENPB-201ENST00000379751 TDRD9Q8NDG6 1382 aaKnown RBP33.22■■■□□ 2.91
CENPB-201ENST00000379751 WDR97A6NE52 1622 aa33.2■■■□□ 2.91
CENPB-201ENST00000379751 ERCC6Q03468 1493 aa33.19■■■□□ 2.9
CENPB-201ENST00000379751 GAPVD1Q14C86 1478 aa33.1■■■□□ 2.89
CENPB-201ENST00000379751 TTBK1Q5TCY1 1321 aaPredicted RBP33.1■■■□□ 2.89
CENPB-201ENST00000379751 TARBP1Q13395 1621 aaKnown RBP33.1■■■□□ 2.89
CENPB-201ENST00000379751 VPS8Q8N3P4 1428 aa33.09■■■□□ 2.89
CENPB-201ENST00000379751 ABCA5Q8WWZ7 1642 aa33.09■■■□□ 2.89
CENPB-201ENST00000379751 WDR62O43379 1518 aa33.05■■■□□ 2.88
CENPB-201ENST00000379751 CUL7Q14999 1698 aa33.05■■■□□ 2.88
CENPB-201ENST00000379751 ARAP1Q96P48 1450 aa32.97■■■□□ 2.87
CENPB-201ENST00000379751 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.86
CENPB-201ENST00000379751 APLP2Q06481 763 aa32.92■■■□□ 2.86
CENPB-201ENST00000379751 IFT140Q96RY7 1462 aa32.92■■■□□ 2.86
CENPB-201ENST00000379751 ARHGAP35Q9NRY4 1499 aa32.92■■■□□ 2.86
CENPB-201ENST00000379751 THOC2Q8NI27 1593 aaKnown RBP32.89■■■□□ 2.86
CENPB-201ENST00000379751 ZNF608Q9ULD9 1512 aaPredicted RBP32.83■■■□□ 2.85
CENPB-201ENST00000379751 PBRM1Q86U86 1689 aa32.81■■■□□ 2.84
CENPB-201ENST00000379751 HRCP23327 699 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms