RNA–Protein interactions for RNA: ENST00000302649.3

TRH-201, Transcript of thyrotropin releasing hormone, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRH, Length 1,978 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRH-201ENST00000302649 NISCHQ9Y2I1 1504 aa49.99■■■■■ 5.59
TRH-201ENST00000302649 CCDC180Q9P1Z9 1646 aa43.65■■■■■ 4.58
TRH-201ENST00000302649 ZCCHC6Q5VYS8 1495 aaKnown RBP41.94■■■■■ 4.3
TRH-201ENST00000302649 ABCC9O60706 1549 aa41.57■■■■■ 4.24
TRH-201ENST00000302649 DCAF8L2P0C7V8 631 aa41.37■■■■■ 4.21
TRH-201ENST00000302649 DCAF1Q9Y4B6 1507 aa41.31■■■■■ 4.2
TRH-201ENST00000302649 MYO15BQ96JP2 1530 aa40.91■■■■■ 4.14
TRH-201ENST00000302649 NACADO15069 1562 aa40.73■■■■■ 4.11
TRH-201ENST00000302649 SHROOM4Q9ULL8 1493 aa40.62■■■■■ 4.09
TRH-201ENST00000302649 RB1CC1Q8TDY2 1594 aa40.43■■■■■ 4.06
TRH-201ENST00000302649 SCRIBQ14160 1630 aa40.14■■■■■ 4.02
TRH-201ENST00000302649 UNC13AQ9UPW8 1703 aa39.68■■■■□ 3.94
TRH-201ENST00000302649 BICRAQ9NZM4 1560 aa39.3■■■■□ 3.88
TRH-201ENST00000302649 PABPN1Q86U42 306 aaKnown RBP eCLIP39.18■■■■□ 3.86
TRH-201ENST00000302649 SUPT5HO00267 1087 aaKnown RBP38.95■■■■□ 3.83
TRH-201ENST00000302649 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
TRH-201ENST00000302649 RSF1Q96T23 1441 aaPredicted RBP38.71■■■■□ 3.79
TRH-201ENST00000302649 MROH2BQ7Z745 1585 aa38.64■■■■□ 3.78
TRH-201ENST00000302649 BAZ1AQ9NRL2 1556 aaPredicted RBP38.58■■■■□ 3.77
TRH-201ENST00000302649 SMARCA4P51532 1647 aa38.47■■■■□ 3.75
TRH-201ENST00000302649 WIZO95785 1651 aa38.3■■■■□ 3.72
TRH-201ENST00000302649 EIF4G1Q04637 1599 aaKnown RBP38.1■■■■□ 3.69
TRH-201ENST00000302649 PEG3Q9GZU2 1588 aa38.01■■■■□ 3.68
TRH-201ENST00000302649 ATAD2BQ9ULI0 1458 aa37.92■■■■□ 3.66
TRH-201ENST00000302649 TOP2AP11388 1531 aaKnown RBP37.86■■■■□ 3.65
TRH-201ENST00000302649 SMARCA2P51531 1590 aa37.84■■■■□ 3.65
TRH-201ENST00000302649 BAZ1BQ9UIG0 1483 aaKnown RBP37.65■■■■□ 3.62
TRH-201ENST00000302649 NCAPD3P42695 1498 aa37.63■■■■□ 3.62
TRH-201ENST00000302649 CC2D2AQ9P2K1 1620 aa37.6■■■■□ 3.61
TRH-201ENST00000302649 HMGXB3Q12766 1538 aa37.52■■■■□ 3.6
TRH-201ENST00000302649 CCDC88BA6NC98 1476 aa37.51■■■■□ 3.6
TRH-201ENST00000302649 CHIC1Q5VXU3 224 aa37.18■■■■□ 3.54
TRH-201ENST00000302649 DNAJC5BQ9UF47 199 aa36.98■■■■□ 3.51
TRH-201ENST00000302649 CFTRP13569 1480 aa36.73■■■■□ 3.47
TRH-201ENST00000302649 CADPSQ9ULU8 1353 aa36.65■■■■□ 3.46
TRH-201ENST00000302649 ABCC8Q09428 1581 aa36.64■■■■□ 3.46
TRH-201ENST00000302649 TRIM41Q8WV44 630 aa36.62■■■■□ 3.45
TRH-201ENST00000302649 PRDM2Q13029 1718 aa36.47■■■■□ 3.43
TRH-201ENST00000302649 NESP48681 1621 aa36.44■■■■□ 3.42
TRH-201ENST00000302649 WRNQ14191 1432 aaPredicted RBP eCLIP36.4■■■■□ 3.42
TRH-201ENST00000302649 LAMC3Q9Y6N6 1575 aa36.35■■■■□ 3.41
TRH-201ENST00000302649 SYNJ1O43426 1573 aa36.29■■■■□ 3.4
TRH-201ENST00000302649 FANCD2Q9BXW9 1451 aa36.23■■■■□ 3.39
TRH-201ENST00000302649 TOP2BQ02880 1626 aa36.14■■■■□ 3.38
TRH-201ENST00000302649 CUX1P39880 1505 aa36.13■■■■□ 3.37
TRH-201ENST00000302649 BIVM-ERCC5R4GMW8 1640 aa36.1■■■■□ 3.37
TRH-201ENST00000302649 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
TRH-201ENST00000302649 CEP164Q9UPV0 1460 aa36■■■■□ 3.35
TRH-201ENST00000302649 FAM9AQ8IZU1 332 aaPredicted RBP35.97■■■■□ 3.35
TRH-201ENST00000302649 KIF21AQ7Z4S6 1674 aa35.97■■■■□ 3.35
TRH-201ENST00000302649 SOGA1O94964 1423 aa35.92■■■■□ 3.34
TRH-201ENST00000302649 DNMBPQ6XZF7 1577 aa35.85■■■■□ 3.33
TRH-201ENST00000302649 RUSC2Q8N2Y8 1516 aa35.83■■■■□ 3.33
TRH-201ENST00000302649 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.33
TRH-201ENST00000302649 TOPBP1Q92547 1522 aa35.82■■■■□ 3.33
TRH-201ENST00000302649 LOC105371045A0A1W2PR82 267 aa35.78■■■■□ 3.32
TRH-201ENST00000302649 FGD5Q6ZNL6 1462 aa35.76■■■■□ 3.31
TRH-201ENST00000302649 EEA1Q15075 1411 aa35.7■■■■□ 3.3
TRH-201ENST00000302649 POLA1P09884 1462 aaPredicted RBP35.64■■■■□ 3.3
TRH-201ENST00000302649 MRC2Q9UBG0 1479 aa35.64■■■■□ 3.3
TRH-201ENST00000302649 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
TRH-201ENST00000302649 CSRNP3Q8WYN3 585 aa35.6■■■■□ 3.29
TRH-201ENST00000302649 RAD54L2Q9Y4B4 1467 aa35.54■■■■□ 3.28
TRH-201ENST00000302649 KIF27Q86VH2 1401 aa35.48■■■■□ 3.27
TRH-201ENST00000302649 EHMT2Q96KQ7 1210 aa35.48■■■■□ 3.27
TRH-201ENST00000302649 WDR62O43379 1518 aa35.47■■■■□ 3.27
TRH-201ENST00000302649 CUX2O14529 1486 aa35.47■■■■□ 3.27
TRH-201ENST00000302649 THOC2Q8NI27 1593 aaKnown RBP35.44■■■■□ 3.26
TRH-201ENST00000302649 ABCA10Q8WWZ4 1543 aa35.43■■■■□ 3.26
TRH-201ENST00000302649 WDR97A6NE52 1622 aa35.34■■■■□ 3.25
TRH-201ENST00000302649 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
TRH-201ENST00000302649 KIF21BO75037 1637 aa35.28■■■■□ 3.24
TRH-201ENST00000302649 IGF1RP08069 1367 aa35.26■■■■□ 3.24
TRH-201ENST00000302649 PRXQ9BXM0 1461 aa35.23■■■■□ 3.23
TRH-201ENST00000302649 GOLGA3Q08378 1498 aa35.22■■■■□ 3.23
TRH-201ENST00000302649 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
TRH-201ENST00000302649 RAPGEF2Q9Y4G8 1499 aa35.18■■■■□ 3.22
TRH-201ENST00000302649 ABCA5Q8WWZ7 1642 aa35.16■■■■□ 3.22
TRH-201ENST00000302649 IFT140Q96RY7 1462 aa35.16■■■■□ 3.22
TRH-201ENST00000302649 GAPVD1Q14C86 1478 aa35.11■■■■□ 3.21
TRH-201ENST00000302649 UBTFP17480 764 aaKnown RBP35.09■■■■□ 3.21
TRH-201ENST00000302649 TNIKQ9UKE5 1360 aa35.09■■■■□ 3.21
TRH-201ENST00000302649 ERICH3Q5RHP9 1530 aa35.09■■■■□ 3.21
TRH-201ENST00000302649 CARMIL1Q5VZK9 1371 aa35.05■■■■□ 3.2
TRH-201ENST00000302649 ZNF608Q9ULD9 1512 aaPredicted RBP35.04■■■■□ 3.2
TRH-201ENST00000302649 AQRO60306 1485 aaKnown RBP eCLIP35.03■■■■□ 3.2
TRH-201ENST00000302649 CUL7Q14999 1698 aa34.92■■■■□ 3.18
TRH-201ENST00000302649 PBRM1Q86U86 1689 aa34.91■■■■□ 3.18
TRH-201ENST00000302649 CEP162Q5TB80 1403 aa34.88■■■■□ 3.17
TRH-201ENST00000302649 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
TRH-201ENST00000302649 GRIN2BQ13224 1484 aa34.85■■■■□ 3.17
TRH-201ENST00000302649 ADAMTS12P58397 1594 aa34.71■■■■□ 3.15
TRH-201ENST00000302649 FHAD1B1AJZ9 1412 aa34.71■■■■□ 3.15
TRH-201ENST00000302649 SNAPC4Q5SXM2 1469 aa34.67■■■■□ 3.14
TRH-201ENST00000302649 CLIP1P30622 1438 aa34.66■■■■□ 3.14
TRH-201ENST00000302649 RANGAP1P46060 587 aaPredicted RBP34.63■■■■□ 3.13
TRH-201ENST00000302649 MAGI1Q96QZ7 1491 aaPredicted RBP34.58■■■■□ 3.13
TRH-201ENST00000302649 CTTNBP2Q8WZ74 1663 aa34.52■■■■□ 3.12
TRH-201ENST00000302649 SYNJ2O15056 1496 aa34.46■■■■□ 3.11
TRH-201ENST00000302649 GRIN2AQ12879 1464 aa34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms