RNA–Protein interactions for RNA: ENST00000599242.1

PHLDB3-207, Transcript of pleckstrin homology like domain family B member 3, humanhuman

TSL 1 (best) BASIC

Gene PHLDB3, Length 2,286 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB3-207ENST00000599242 NISCHQ9Y2I1 1504 aa50.22■■■■■ 5.63
PHLDB3-207ENST00000599242 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
PHLDB3-207ENST00000599242 ZCCHC6Q5VYS8 1495 aaKnown RBP42.12■■■■■ 4.33
PHLDB3-207ENST00000599242 ABCC9O60706 1549 aa42.01■■■■■ 4.32
PHLDB3-207ENST00000599242 DCAF8L2P0C7V8 631 aa41.82■■■■■ 4.29
PHLDB3-207ENST00000599242 DCAF1Q9Y4B6 1507 aa41.36■■■■■ 4.21
PHLDB3-207ENST00000599242 SHROOM4Q9ULL8 1493 aa41.02■■■■■ 4.16
PHLDB3-207ENST00000599242 MYO15BQ96JP2 1530 aa40.97■■■■■ 4.15
PHLDB3-207ENST00000599242 NACADO15069 1562 aa40.9■■■■■ 4.14
PHLDB3-207ENST00000599242 RB1CC1Q8TDY2 1594 aa40.67■■■■■ 4.1
PHLDB3-207ENST00000599242 SCRIBQ14160 1630 aa40.49■■■■■ 4.07
PHLDB3-207ENST00000599242 UNC13AQ9UPW8 1703 aa39.97■■■■□ 3.99
PHLDB3-207ENST00000599242 PABPN1Q86U42 306 aaKnown RBP eCLIP39.62■■■■□ 3.93
PHLDB3-207ENST00000599242 BICRAQ9NZM4 1560 aa39.58■■■■□ 3.93
PHLDB3-207ENST00000599242 SUPT5HO00267 1087 aaKnown RBP39.24■■■■□ 3.87
PHLDB3-207ENST00000599242 CECR2Q9BXF3 1484 aa39.2■■■■□ 3.87
PHLDB3-207ENST00000599242 RSF1Q96T23 1441 aaPredicted RBP38.89■■■■□ 3.82
PHLDB3-207ENST00000599242 MROH2BQ7Z745 1585 aa38.88■■■■□ 3.81
PHLDB3-207ENST00000599242 BAZ1AQ9NRL2 1556 aaPredicted RBP38.76■■■■□ 3.8
PHLDB3-207ENST00000599242 SMARCA4P51532 1647 aa38.69■■■■□ 3.78
PHLDB3-207ENST00000599242 WIZO95785 1651 aa38.56■■■■□ 3.76
PHLDB3-207ENST00000599242 EIF4G1Q04637 1599 aaKnown RBP38.39■■■■□ 3.74
PHLDB3-207ENST00000599242 ATAD2BQ9ULI0 1458 aa38.15■■■■□ 3.7
PHLDB3-207ENST00000599242 PEG3Q9GZU2 1588 aa38.14■■■■□ 3.7
PHLDB3-207ENST00000599242 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
PHLDB3-207ENST00000599242 TOP2AP11388 1531 aaKnown RBP38.02■■■■□ 3.68
PHLDB3-207ENST00000599242 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
PHLDB3-207ENST00000599242 BAZ1BQ9UIG0 1483 aaKnown RBP37.91■■■■□ 3.66
PHLDB3-207ENST00000599242 NCAPD3P42695 1498 aa37.81■■■■□ 3.64
PHLDB3-207ENST00000599242 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
PHLDB3-207ENST00000599242 HMGXB3Q12766 1538 aa37.7■■■■□ 3.63
PHLDB3-207ENST00000599242 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
PHLDB3-207ENST00000599242 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
PHLDB3-207ENST00000599242 ABCC8Q09428 1581 aa36.92■■■■□ 3.5
PHLDB3-207ENST00000599242 CFTRP13569 1480 aa36.91■■■■□ 3.5
PHLDB3-207ENST00000599242 CADPSQ9ULU8 1353 aa36.86■■■■□ 3.49
PHLDB3-207ENST00000599242 NESP48681 1621 aa36.81■■■■□ 3.48
PHLDB3-207ENST00000599242 TRIM41Q8WV44 630 aa36.79■■■■□ 3.48
PHLDB3-207ENST00000599242 PRDM2Q13029 1718 aa36.62■■■■□ 3.45
PHLDB3-207ENST00000599242 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
PHLDB3-207ENST00000599242 LAMC3Q9Y6N6 1575 aa36.56■■■■□ 3.44
PHLDB3-207ENST00000599242 SYNJ1O43426 1573 aa36.52■■■■□ 3.44
PHLDB3-207ENST00000599242 FANCD2Q9BXW9 1451 aa36.49■■■■□ 3.43
PHLDB3-207ENST00000599242 CUX1P39880 1505 aa36.36■■■■□ 3.41
PHLDB3-207ENST00000599242 PDS5BQ9NTI5 1447 aa36.3■■■■□ 3.4
PHLDB3-207ENST00000599242 TOP2BQ02880 1626 aa36.29■■■■□ 3.4
PHLDB3-207ENST00000599242 FAM9AQ8IZU1 332 aaPredicted RBP36.28■■■■□ 3.4
PHLDB3-207ENST00000599242 KIF21AQ7Z4S6 1674 aa36.28■■■■□ 3.4
PHLDB3-207ENST00000599242 CEP164Q9UPV0 1460 aa36.26■■■■□ 3.4
PHLDB3-207ENST00000599242 BIVM-ERCC5R4GMW8 1640 aa36.23■■■■□ 3.39
PHLDB3-207ENST00000599242 SOGA1O94964 1423 aa36.14■■■■□ 3.38
PHLDB3-207ENST00000599242 URB2Q14146 1524 aaKnown RBP36.09■■■■□ 3.37
PHLDB3-207ENST00000599242 RUSC2Q8N2Y8 1516 aa36.07■■■■□ 3.36
PHLDB3-207ENST00000599242 TOPBP1Q92547 1522 aa36.05■■■■□ 3.36
PHLDB3-207ENST00000599242 DNMBPQ6XZF7 1577 aa36.04■■■■□ 3.36
PHLDB3-207ENST00000599242 FGD5Q6ZNL6 1462 aa36■■■■□ 3.35
PHLDB3-207ENST00000599242 LOC105371045A0A1W2PR82 267 aa35.99■■■■□ 3.35
PHLDB3-207ENST00000599242 ERCC6Q03468 1493 aa35.98■■■■□ 3.35
PHLDB3-207ENST00000599242 EHMT2Q96KQ7 1210 aa35.93■■■■□ 3.34
PHLDB3-207ENST00000599242 POLA1P09884 1462 aaPredicted RBP35.88■■■■□ 3.33
PHLDB3-207ENST00000599242 MRC2Q9UBG0 1479 aa35.88■■■■□ 3.33
PHLDB3-207ENST00000599242 RAD54L2Q9Y4B4 1467 aa35.83■■■■□ 3.33
PHLDB3-207ENST00000599242 THOC2Q8NI27 1593 aaKnown RBP35.73■■■■□ 3.31
PHLDB3-207ENST00000599242 EEA1Q15075 1411 aa35.72■■■■□ 3.31
PHLDB3-207ENST00000599242 CSRNP3Q8WYN3 585 aa35.72■■■■□ 3.31
PHLDB3-207ENST00000599242 WDR62O43379 1518 aa35.71■■■■□ 3.31
PHLDB3-207ENST00000599242 CUX2O14529 1486 aa35.71■■■■□ 3.31
PHLDB3-207ENST00000599242 KIF27Q86VH2 1401 aa35.64■■■■□ 3.3
PHLDB3-207ENST00000599242 ABCA10Q8WWZ4 1543 aa35.6■■■■□ 3.29
PHLDB3-207ENST00000599242 TARBP1Q13395 1621 aaKnown RBP35.53■■■■□ 3.28
PHLDB3-207ENST00000599242 WDR97A6NE52 1622 aa35.53■■■■□ 3.28
PHLDB3-207ENST00000599242 TDRD9Q8NDG6 1382 aaKnown RBP35.52■■■■□ 3.28
PHLDB3-207ENST00000599242 IGF1RP08069 1367 aa35.43■■■■□ 3.26
PHLDB3-207ENST00000599242 RAPGEF2Q9Y4G8 1499 aa35.39■■■■□ 3.26
PHLDB3-207ENST00000599242 ZNF608Q9ULD9 1512 aaPredicted RBP35.37■■■■□ 3.25
PHLDB3-207ENST00000599242 KIF21BO75037 1637 aa35.36■■■■□ 3.25
PHLDB3-207ENST00000599242 IFT140Q96RY7 1462 aa35.36■■■■□ 3.25
PHLDB3-207ENST00000599242 ABCA5Q8WWZ7 1642 aa35.36■■■■□ 3.25
PHLDB3-207ENST00000599242 AQRO60306 1485 aaKnown RBP eCLIP35.35■■■■□ 3.255e-7■■■■■ 29
PHLDB3-207ENST00000599242 PRXQ9BXM0 1461 aa35.35■■■■□ 3.25
PHLDB3-207ENST00000599242 GOLGA3Q08378 1498 aa35.33■■■■□ 3.25
PHLDB3-207ENST00000599242 GAPVD1Q14C86 1478 aa35.33■■■■□ 3.25
PHLDB3-207ENST00000599242 UBTFP17480 764 aaKnown RBP35.31■■■■□ 3.24
PHLDB3-207ENST00000599242 CARMIL1Q5VZK9 1371 aa35.23■■■■□ 3.23
PHLDB3-207ENST00000599242 ERICH3Q5RHP9 1530 aa35.17■■■■□ 3.22
PHLDB3-207ENST00000599242 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
PHLDB3-207ENST00000599242 TNIKQ9UKE5 1360 aa35.14■■■■□ 3.22
PHLDB3-207ENST00000599242 PBRM1Q86U86 1689 aa35.14■■■■□ 3.22
PHLDB3-207ENST00000599242 CUL7Q14999 1698 aa35.07■■■■□ 3.2
PHLDB3-207ENST00000599242 GRIN2BQ13224 1484 aa35.05■■■■□ 3.2
PHLDB3-207ENST00000599242 RANGAP1P46060 587 aaPredicted RBP35.03■■■■□ 3.2
PHLDB3-207ENST00000599242 CEP162Q5TB80 1403 aa35.03■■■■□ 3.2
PHLDB3-207ENST00000599242 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
PHLDB3-207ENST00000599242 ADAMTS12P58397 1594 aa34.93■■■■□ 3.18
PHLDB3-207ENST00000599242 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
PHLDB3-207ENST00000599242 CLIP1P30622 1438 aa34.81■■■■□ 3.16
PHLDB3-207ENST00000599242 MAGI1Q96QZ7 1491 aaPredicted RBP34.77■■■■□ 3.16
PHLDB3-207ENST00000599242 FBLN2P98095 1184 aa34.74■■■■□ 3.15
PHLDB3-207ENST00000599242 CTTNBP2Q8WZ74 1663 aa34.69■■■■□ 3.14
PHLDB3-207ENST00000599242 CHMP7Q8WUX9 453 aaPredicted RBP34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms