RNA–Protein interactions for RNA: ENST00000375430.8

GRTP1-202, Transcript of growth hormone regulated TBC protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GRTP1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-202ENST00000375430 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
GRTP1-202ENST00000375430 CCDC180Q9P1Z9 1646 aa40.7■■■■■ 4.11
GRTP1-202ENST00000375430 ZCCHC6Q5VYS8 1495 aaKnown RBP39.2■■■■□ 3.87
GRTP1-202ENST00000375430 ABCC9O60706 1549 aa38.77■■■■□ 3.8
GRTP1-202ENST00000375430 DCAF8L2P0C7V8 631 aa38.61■■■■□ 3.77
GRTP1-202ENST00000375430 DCAF1Q9Y4B6 1507 aa38.51■■■■□ 3.76
GRTP1-202ENST00000375430 SHROOM4Q9ULL8 1493 aa38.27■■■■□ 3.72
GRTP1-202ENST00000375430 MYO15BQ96JP2 1530 aa38.15■■■■□ 3.7
GRTP1-202ENST00000375430 NACADO15069 1562 aa38.02■■■■□ 3.68
GRTP1-202ENST00000375430 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.64
GRTP1-202ENST00000375430 SCRIBQ14160 1630 aa37.37■■■■□ 3.57
GRTP1-202ENST00000375430 SUPT5HO00267 1087 aaKnown RBP37.11■■■■□ 3.53
GRTP1-202ENST00000375430 UNC13AQ9UPW8 1703 aa36.89■■■■□ 3.5
GRTP1-202ENST00000375430 BICRAQ9NZM4 1560 aa36.55■■■■□ 3.44
GRTP1-202ENST00000375430 PABPN1Q86U42 306 aaKnown RBP eCLIP36.52■■■■□ 3.44
GRTP1-202ENST00000375430 RSF1Q96T23 1441 aaPredicted RBP36.31■■■■□ 3.4
GRTP1-202ENST00000375430 CECR2Q9BXF3 1484 aa36.14■■■■□ 3.38
GRTP1-202ENST00000375430 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
GRTP1-202ENST00000375430 MROH2BQ7Z745 1585 aa35.96■■■■□ 3.35
GRTP1-202ENST00000375430 CHIC1Q5VXU3 224 aa35.87■■■■□ 3.33
GRTP1-202ENST00000375430 SMARCA4P51532 1647 aa35.81■■■■□ 3.32
GRTP1-202ENST00000375430 WIZO95785 1651 aa35.7■■■■□ 3.31
GRTP1-202ENST00000375430 EIF4G1Q04637 1599 aaKnown RBP35.52■■■■□ 3.28
GRTP1-202ENST00000375430 PEG3Q9GZU2 1588 aa35.39■■■■□ 3.26
GRTP1-202ENST00000375430 TOP2AP11388 1531 aaKnown RBP35.34■■■■□ 3.25
GRTP1-202ENST00000375430 SMARCA2P51531 1590 aa35.32■■■■□ 3.24
GRTP1-202ENST00000375430 ATAD2BQ9ULI0 1458 aa35.32■■■■□ 3.24
GRTP1-202ENST00000375430 BAZ1BQ9UIG0 1483 aaKnown RBP35.13■■■■□ 3.21
GRTP1-202ENST00000375430 NCAPD3P42695 1498 aa35.08■■■■□ 3.21
GRTP1-202ENST00000375430 CC2D2AQ9P2K1 1620 aa35.06■■■■□ 3.2
GRTP1-202ENST00000375430 CCDC88BA6NC98 1476 aa35■■■■□ 3.19
GRTP1-202ENST00000375430 HMGXB3Q12766 1538 aa34.99■■■■□ 3.19
GRTP1-202ENST00000375430 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
GRTP1-202ENST00000375430 LOC105371045A0A1W2PR82 267 aa34.5■■■■□ 3.11
GRTP1-202ENST00000375430 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
GRTP1-202ENST00000375430 ABCC8Q09428 1581 aa34.41■■■■□ 3.1
GRTP1-202ENST00000375430 FAM9AQ8IZU1 332 aaPredicted RBP34.21■■■■□ 3.07
GRTP1-202ENST00000375430 CFTRP13569 1480 aa34.21■■■■□ 3.07
GRTP1-202ENST00000375430 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
GRTP1-202ENST00000375430 WRNQ14191 1432 aaPredicted RBP eCLIP34.14■■■■□ 3.06
GRTP1-202ENST00000375430 SYNJ1O43426 1573 aa33.98■■■■□ 3.03
GRTP1-202ENST00000375430 PRDM2Q13029 1718 aa33.98■■■■□ 3.03
GRTP1-202ENST00000375430 EEA1Q15075 1411 aa33.97■■■■□ 3.03
GRTP1-202ENST00000375430 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
GRTP1-202ENST00000375430 NESP48681 1621 aa33.91■■■■□ 3.02
GRTP1-202ENST00000375430 SOGA1O94964 1423 aa33.89■■■■□ 3.02
GRTP1-202ENST00000375430 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
GRTP1-202ENST00000375430 BIVM-ERCC5R4GMW8 1640 aa33.79■■■■□ 3
GRTP1-202ENST00000375430 FANCD2Q9BXW9 1451 aa33.78■■■■□ 3
GRTP1-202ENST00000375430 RUSC2Q8N2Y8 1516 aa33.74■■■□□ 2.99
GRTP1-202ENST00000375430 PDS5BQ9NTI5 1447 aa33.74■■■□□ 2.99
GRTP1-202ENST00000375430 CSRNP3Q8WYN3 585 aa33.72■■■□□ 2.99
GRTP1-202ENST00000375430 EHMT2Q96KQ7 1210 aa33.67■■■□□ 2.98
GRTP1-202ENST00000375430 CEP164Q9UPV0 1460 aa33.61■■■□□ 2.97
GRTP1-202ENST00000375430 CUX1P39880 1505 aa33.59■■■□□ 2.97
GRTP1-202ENST00000375430 TNIKQ9UKE5 1360 aa33.53■■■□□ 2.96
GRTP1-202ENST00000375430 KIF21BO75037 1637 aa33.51■■■□□ 2.95
GRTP1-202ENST00000375430 GOLGA3Q08378 1498 aa33.5■■■□□ 2.95
GRTP1-202ENST00000375430 KIF21AQ7Z4S6 1674 aa33.49■■■□□ 2.95
GRTP1-202ENST00000375430 PCGF6Q9BYE7 350 aa33.49■■■□□ 2.95
GRTP1-202ENST00000375430 DNMBPQ6XZF7 1577 aa33.41■■■□□ 2.94
GRTP1-202ENST00000375430 TRIM26Q12899 539 aaPredicted RBP33.4■■■□□ 2.94
GRTP1-202ENST00000375430 TOPBP1Q92547 1522 aa33.37■■■□□ 2.93
GRTP1-202ENST00000375430 CEP162Q5TB80 1403 aa33.36■■■□□ 2.93
GRTP1-202ENST00000375430 URB2Q14146 1524 aaKnown RBP33.34■■■□□ 2.93
GRTP1-202ENST00000375430 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
GRTP1-202ENST00000375430 FGD5Q6ZNL6 1462 aa33.3■■■□□ 2.92
GRTP1-202ENST00000375430 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
GRTP1-202ENST00000375430 MRC2Q9UBG0 1479 aa33.27■■■□□ 2.92
GRTP1-202ENST00000375430 KIF27Q86VH2 1401 aa33.24■■■□□ 2.91
GRTP1-202ENST00000375430 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
GRTP1-202ENST00000375430 RAPGEF2Q9Y4G8 1499 aa33.18■■■□□ 2.9
GRTP1-202ENST00000375430 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
GRTP1-202ENST00000375430 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
GRTP1-202ENST00000375430 WDR62O43379 1518 aa33.08■■■□□ 2.89
GRTP1-202ENST00000375430 RAD54L2Q9Y4B4 1467 aa33.06■■■□□ 2.88
GRTP1-202ENST00000375430 CUX2O14529 1486 aa33.05■■■□□ 2.88
GRTP1-202ENST00000375430 HRCP23327 699 aa33.02■■■□□ 2.88
GRTP1-202ENST00000375430 THOC2Q8NI27 1593 aaKnown RBP33.02■■■□□ 2.88
GRTP1-202ENST00000375430 ABCA10Q8WWZ4 1543 aa33.01■■■□□ 2.87
GRTP1-202ENST00000375430 CLIP1P30622 1438 aa32.98■■■□□ 2.87
GRTP1-202ENST00000375430 IGF1RP08069 1367 aa32.9■■■□□ 2.86
GRTP1-202ENST00000375430 TARBP1Q13395 1621 aaKnown RBP32.87■■■□□ 2.85
GRTP1-202ENST00000375430 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
GRTP1-202ENST00000375430 IFT140Q96RY7 1462 aa32.83■■■□□ 2.85
GRTP1-202ENST00000375430 TDRD9Q8NDG6 1382 aaKnown RBP32.8■■■□□ 2.84
GRTP1-202ENST00000375430 VPS8Q8N3P4 1428 aa32.79■■■□□ 2.84
GRTP1-202ENST00000375430 PPARGC1BQ86YN6 1023 aaKnown RBP32.78■■■□□ 2.84
GRTP1-202ENST00000375430 CARMIL1Q5VZK9 1371 aa32.73■■■□□ 2.83
GRTP1-202ENST00000375430 GAPVD1Q14C86 1478 aa32.73■■■□□ 2.83
GRTP1-202ENST00000375430 ABCA5Q8WWZ7 1642 aa32.72■■■□□ 2.83
GRTP1-202ENST00000375430 AQRO60306 1485 aaKnown RBP eCLIP32.63■■■□□ 2.811e-7■■■■□ 20.5
GRTP1-202ENST00000375430 ZNF608Q9ULD9 1512 aaPredicted RBP32.61■■■□□ 2.81
GRTP1-202ENST00000375430 CUL7Q14999 1698 aa32.6■■■□□ 2.81
GRTP1-202ENST00000375430 ARAP1Q96P48 1450 aa32.6■■■□□ 2.81
GRTP1-202ENST00000375430 GRIN2BQ13224 1484 aa32.53■■■□□ 2.8
GRTP1-202ENST00000375430 RANGAP1P46060 587 aaPredicted RBP32.53■■■□□ 2.8
GRTP1-202ENST00000375430 PBRM1Q86U86 1689 aa32.51■■■□□ 2.8
GRTP1-202ENST00000375430 EIF4G3O43432 1585 aaKnown RBP32.5■■■□□ 2.79
GRTP1-202ENST00000375430 ARHGAP35Q9NRY4 1499 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms