RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 NISCHQ9Y2I1 1504 aa45.22■■■■■ 4.83
SOX3-201ENST00000370536 CCDC180Q9P1Z9 1646 aa38.87■■■■□ 3.81
SOX3-201ENST00000370536 ZCCHC6Q5VYS8 1495 aaKnown RBP38.13■■■■□ 3.69
SOX3-201ENST00000370536 SHROOM4Q9ULL8 1493 aa37.8■■■■□ 3.64
SOX3-201ENST00000370536 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
SOX3-201ENST00000370536 DCAF1Q9Y4B6 1507 aa37.22■■■■□ 3.55
SOX3-201ENST00000370536 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
SOX3-201ENST00000370536 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
SOX3-201ENST00000370536 ABCC9O60706 1549 aa36.39■■■■□ 3.42
SOX3-201ENST00000370536 SCRIBQ14160 1630 aa36.15■■■■□ 3.38
SOX3-201ENST00000370536 NACADO15069 1562 aa36.07■■■■□ 3.37
SOX3-201ENST00000370536 RB1CC1Q8TDY2 1594 aa35.61■■■■□ 3.29
SOX3-201ENST00000370536 CHIC1Q5VXU3 224 aa35.49■■■■□ 3.27
SOX3-201ENST00000370536 RSF1Q96T23 1441 aaPredicted RBP35.47■■■■□ 3.27
SOX3-201ENST00000370536 CECR2Q9BXF3 1484 aa35.23■■■■□ 3.23
SOX3-201ENST00000370536 MROH2BQ7Z745 1585 aa35.06■■■■□ 3.2
SOX3-201ENST00000370536 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
SOX3-201ENST00000370536 WIZO95785 1651 aa34.82■■■■□ 3.16
SOX3-201ENST00000370536 BAZ1AQ9NRL2 1556 aaPredicted RBP34.8■■■■□ 3.16
SOX3-201ENST00000370536 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
SOX3-201ENST00000370536 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
SOX3-201ENST00000370536 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
SOX3-201ENST00000370536 TRIM41Q8WV44 630 aa34.37■■■■□ 3.09
SOX3-201ENST00000370536 TOP2AP11388 1531 aaKnown RBP34.36■■■■□ 3.09
SOX3-201ENST00000370536 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
SOX3-201ENST00000370536 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
SOX3-201ENST00000370536 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
SOX3-201ENST00000370536 SMARCA2P51531 1590 aa34.12■■■■□ 3.05
SOX3-201ENST00000370536 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
SOX3-201ENST00000370536 FAM9AQ8IZU1 332 aaPredicted RBP33.94■■■■□ 3.02
SOX3-201ENST00000370536 ATAD2BQ9ULI0 1458 aa33.86■■■■□ 3.01
SOX3-201ENST00000370536 ABCC8Q09428 1581 aa33.76■■■□□ 2.99
SOX3-201ENST00000370536 BAZ1BQ9UIG0 1483 aaKnown RBP33.71■■■□□ 2.99
SOX3-201ENST00000370536 EHMT2Q96KQ7 1210 aa33.58■■■□□ 2.97
SOX3-201ENST00000370536 PCGF6Q9BYE7 350 aa33.56■■■□□ 2.96
SOX3-201ENST00000370536 HRCP23327 699 aa33.42■■■□□ 2.94
SOX3-201ENST00000370536 NCAPD3P42695 1498 aa33.36■■■□□ 2.93
SOX3-201ENST00000370536 WRNQ14191 1432 aaPredicted RBP eCLIP33.34■■■□□ 2.93
SOX3-201ENST00000370536 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
SOX3-201ENST00000370536 SOGA1O94964 1423 aa33.3■■■□□ 2.92
SOX3-201ENST00000370536 TRIM26Q12899 539 aaPredicted RBP33.2■■■□□ 2.9
SOX3-201ENST00000370536 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
SOX3-201ENST00000370536 RUSC2Q8N2Y8 1516 aa33.16■■■□□ 2.9
SOX3-201ENST00000370536 EEA1Q15075 1411 aa33.16■■■□□ 2.9
SOX3-201ENST00000370536 CSRNP3Q8WYN3 585 aa33.08■■■□□ 2.89
SOX3-201ENST00000370536 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
SOX3-201ENST00000370536 TNIKQ9UKE5 1360 aa32.9■■■□□ 2.86
SOX3-201ENST00000370536 CFTRP13569 1480 aa32.88■■■□□ 2.85
SOX3-201ENST00000370536 CEP162Q5TB80 1403 aa32.85■■■□□ 2.85
SOX3-201ENST00000370536 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
SOX3-201ENST00000370536 GOLGA3Q08378 1498 aa32.84■■■□□ 2.85
SOX3-201ENST00000370536 UBTFP17480 764 aaKnown RBP32.81■■■□□ 2.84
SOX3-201ENST00000370536 BIVM-ERCC5R4GMW8 1640 aa32.81■■■□□ 2.84
SOX3-201ENST00000370536 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
SOX3-201ENST00000370536 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
SOX3-201ENST00000370536 KIF21BO75037 1637 aa32.72■■■□□ 2.83
SOX3-201ENST00000370536 CUX1P39880 1505 aa32.71■■■□□ 2.83
SOX3-201ENST00000370536 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
SOX3-201ENST00000370536 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
SOX3-201ENST00000370536 RAPGEF2Q9Y4G8 1499 aa32.55■■■□□ 2.8
SOX3-201ENST00000370536 CLIP1P30622 1438 aa32.4■■■□□ 2.78
SOX3-201ENST00000370536 KIF27Q86VH2 1401 aa32.39■■■□□ 2.78
SOX3-201ENST00000370536 PRXQ9BXM0 1461 aa32.38■■■□□ 2.77
SOX3-201ENST00000370536 TTBK1Q5TCY1 1321 aaPredicted RBP32.33■■■□□ 2.77
SOX3-201ENST00000370536 ERICH3Q5RHP9 1530 aa32.33■■■□□ 2.77
SOX3-201ENST00000370536 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
SOX3-201ENST00000370536 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
SOX3-201ENST00000370536 RANGAP1P46060 587 aaPredicted RBP32.23■■■□□ 2.75
SOX3-201ENST00000370536 NESP48681 1621 aa32.22■■■□□ 2.75
SOX3-201ENST00000370536 ZEB1P37275 1124 aaPredicted RBP32.22■■■□□ 2.75
SOX3-201ENST00000370536 CUX2O14529 1486 aa32.2■■■□□ 2.75
SOX3-201ENST00000370536 VPS8Q8N3P4 1428 aa32.19■■■□□ 2.74
SOX3-201ENST00000370536 IGF1RP08069 1367 aa32.09■■■□□ 2.73
SOX3-201ENST00000370536 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
SOX3-201ENST00000370536 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
SOX3-201ENST00000370536 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
SOX3-201ENST00000370536 TOPBP1Q92547 1522 aa32.02■■■□□ 2.72
SOX3-201ENST00000370536 ARAP1Q96P48 1450 aa31.98■■■□□ 2.71
SOX3-201ENST00000370536 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.71
SOX3-201ENST00000370536 RAD54L2Q9Y4B4 1467 aa31.95■■■□□ 2.7
SOX3-201ENST00000370536 APLP2Q06481 763 aa31.94■■■□□ 2.7
SOX3-201ENST00000370536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.94■■■□□ 2.7
SOX3-201ENST00000370536 CARMIL1Q5VZK9 1371 aa31.94■■■□□ 2.7
SOX3-201ENST00000370536 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
SOX3-201ENST00000370536 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
SOX3-201ENST00000370536 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
SOX3-201ENST00000370536 CCER1Q8TC90 406 aaPredicted RBP31.84■■■□□ 2.69
SOX3-201ENST00000370536 ARHGAP35Q9NRY4 1499 aa31.82■■■□□ 2.69
SOX3-201ENST00000370536 KIF21AQ7Z4S6 1674 aa31.71■■■□□ 2.67
SOX3-201ENST00000370536 WDR97A6NE52 1622 aa31.66■■■□□ 2.66
SOX3-201ENST00000370536 KANK4Q5T7N3 995 aaPredicted RBP31.63■■■□□ 2.65
SOX3-201ENST00000370536 HNRNPUL2Q1KMD3 747 aaKnown RBP31.63■■■□□ 2.65
SOX3-201ENST00000370536 CUL7Q14999 1698 aa31.61■■■□□ 2.65
SOX3-201ENST00000370536 TDRD9Q8NDG6 1382 aaKnown RBP31.58■■■□□ 2.65
SOX3-201ENST00000370536 ABCA5Q8WWZ7 1642 aa31.55■■■□□ 2.64
SOX3-201ENST00000370536 GAPVD1Q14C86 1478 aa31.51■■■□□ 2.63
SOX3-201ENST00000370536 TARBP1Q13395 1621 aaKnown RBP31.44■■■□□ 2.62
SOX3-201ENST00000370536 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
SOX3-201ENST00000370536 CTTNBP2Q8WZ74 1663 aa31.4■■■□□ 2.62
SOX3-201ENST00000370536 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms