RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 NISCHQ9Y2I1 1504 aa45.22■■■■■ 4.83
SOX3-201ENST00000370536 CCDC180Q9P1Z9 1646 aa38.87■■■■□ 3.81
SOX3-201ENST00000370536 ZCCHC6Q5VYS8 1495 aaKnown RBP38.13■■■■□ 3.69
SOX3-201ENST00000370536 SHROOM4Q9ULL8 1493 aa37.8■■■■□ 3.64
SOX3-201ENST00000370536 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
SOX3-201ENST00000370536 DCAF1Q9Y4B6 1507 aa37.22■■■■□ 3.55
SOX3-201ENST00000370536 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
SOX3-201ENST00000370536 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
SOX3-201ENST00000370536 ABCC9O60706 1549 aa36.39■■■■□ 3.42
SOX3-201ENST00000370536 SCRIBQ14160 1630 aa36.15■■■■□ 3.38
SOX3-201ENST00000370536 NACADO15069 1562 aa36.07■■■■□ 3.37
SOX3-201ENST00000370536 RB1CC1Q8TDY2 1594 aa35.61■■■■□ 3.29
SOX3-201ENST00000370536 CHIC1Q5VXU3 224 aa35.49■■■■□ 3.27
SOX3-201ENST00000370536 RSF1Q96T23 1441 aaPredicted RBP35.47■■■■□ 3.27
SOX3-201ENST00000370536 CECR2Q9BXF3 1484 aa35.23■■■■□ 3.23
SOX3-201ENST00000370536 MROH2BQ7Z745 1585 aa35.06■■■■□ 3.2
SOX3-201ENST00000370536 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
SOX3-201ENST00000370536 WIZO95785 1651 aa34.82■■■■□ 3.16
SOX3-201ENST00000370536 BAZ1AQ9NRL2 1556 aaPredicted RBP34.8■■■■□ 3.16
SOX3-201ENST00000370536 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
SOX3-201ENST00000370536 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
SOX3-201ENST00000370536 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
SOX3-201ENST00000370536 TRIM41Q8WV44 630 aa34.37■■■■□ 3.09
SOX3-201ENST00000370536 TOP2AP11388 1531 aaKnown RBP34.36■■■■□ 3.09
SOX3-201ENST00000370536 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
SOX3-201ENST00000370536 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
SOX3-201ENST00000370536 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
SOX3-201ENST00000370536 SMARCA2P51531 1590 aa34.12■■■■□ 3.05
SOX3-201ENST00000370536 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
SOX3-201ENST00000370536 FAM9AQ8IZU1 332 aaPredicted RBP33.94■■■■□ 3.02
SOX3-201ENST00000370536 ATAD2BQ9ULI0 1458 aa33.86■■■■□ 3.01
SOX3-201ENST00000370536 ABCC8Q09428 1581 aa33.76■■■□□ 2.99
SOX3-201ENST00000370536 BAZ1BQ9UIG0 1483 aaKnown RBP33.71■■■□□ 2.99
SOX3-201ENST00000370536 EHMT2Q96KQ7 1210 aa33.58■■■□□ 2.97
SOX3-201ENST00000370536 PCGF6Q9BYE7 350 aa33.56■■■□□ 2.96
SOX3-201ENST00000370536 HRCP23327 699 aa33.42■■■□□ 2.94
SOX3-201ENST00000370536 NCAPD3P42695 1498 aa33.36■■■□□ 2.93
SOX3-201ENST00000370536 WRNQ14191 1432 aaPredicted RBP eCLIP33.34■■■□□ 2.93
SOX3-201ENST00000370536 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
SOX3-201ENST00000370536 SOGA1O94964 1423 aa33.3■■■□□ 2.92
SOX3-201ENST00000370536 TRIM26Q12899 539 aaPredicted RBP33.2■■■□□ 2.9
SOX3-201ENST00000370536 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
SOX3-201ENST00000370536 RUSC2Q8N2Y8 1516 aa33.16■■■□□ 2.9
SOX3-201ENST00000370536 EEA1Q15075 1411 aa33.16■■■□□ 2.9
SOX3-201ENST00000370536 CSRNP3Q8WYN3 585 aa33.08■■■□□ 2.89
SOX3-201ENST00000370536 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
SOX3-201ENST00000370536 TNIKQ9UKE5 1360 aa32.9■■■□□ 2.86
SOX3-201ENST00000370536 CFTRP13569 1480 aa32.88■■■□□ 2.85
SOX3-201ENST00000370536 CEP162Q5TB80 1403 aa32.85■■■□□ 2.85
SOX3-201ENST00000370536 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
SOX3-201ENST00000370536 GOLGA3Q08378 1498 aa32.84■■■□□ 2.85
SOX3-201ENST00000370536 UBTFP17480 764 aaKnown RBP32.81■■■□□ 2.84
SOX3-201ENST00000370536 BIVM-ERCC5R4GMW8 1640 aa32.81■■■□□ 2.84
SOX3-201ENST00000370536 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
SOX3-201ENST00000370536 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
SOX3-201ENST00000370536 KIF21BO75037 1637 aa32.72■■■□□ 2.83
SOX3-201ENST00000370536 CUX1P39880 1505 aa32.71■■■□□ 2.83
SOX3-201ENST00000370536 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
SOX3-201ENST00000370536 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
SOX3-201ENST00000370536 RAPGEF2Q9Y4G8 1499 aa32.55■■■□□ 2.8
SOX3-201ENST00000370536 CLIP1P30622 1438 aa32.4■■■□□ 2.78
SOX3-201ENST00000370536 KIF27Q86VH2 1401 aa32.39■■■□□ 2.78
SOX3-201ENST00000370536 PRXQ9BXM0 1461 aa32.38■■■□□ 2.77
SOX3-201ENST00000370536 TTBK1Q5TCY1 1321 aaPredicted RBP32.33■■■□□ 2.77
SOX3-201ENST00000370536 ERICH3Q5RHP9 1530 aa32.33■■■□□ 2.77
SOX3-201ENST00000370536 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
SOX3-201ENST00000370536 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
SOX3-201ENST00000370536 RANGAP1P46060 587 aaPredicted RBP32.23■■■□□ 2.75
SOX3-201ENST00000370536 NESP48681 1621 aa32.22■■■□□ 2.75
SOX3-201ENST00000370536 ZEB1P37275 1124 aaPredicted RBP32.22■■■□□ 2.75
SOX3-201ENST00000370536 CUX2O14529 1486 aa32.2■■■□□ 2.75
SOX3-201ENST00000370536 VPS8Q8N3P4 1428 aa32.19■■■□□ 2.74
SOX3-201ENST00000370536 IGF1RP08069 1367 aa32.09■■■□□ 2.73
SOX3-201ENST00000370536 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
SOX3-201ENST00000370536 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
SOX3-201ENST00000370536 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
SOX3-201ENST00000370536 TOPBP1Q92547 1522 aa32.02■■■□□ 2.72
SOX3-201ENST00000370536 ARAP1Q96P48 1450 aa31.98■■■□□ 2.71
SOX3-201ENST00000370536 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.71
SOX3-201ENST00000370536 RAD54L2Q9Y4B4 1467 aa31.95■■■□□ 2.7
SOX3-201ENST00000370536 APLP2Q06481 763 aa31.94■■■□□ 2.7
SOX3-201ENST00000370536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.94■■■□□ 2.7
SOX3-201ENST00000370536 CARMIL1Q5VZK9 1371 aa31.94■■■□□ 2.7
SOX3-201ENST00000370536 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
SOX3-201ENST00000370536 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
SOX3-201ENST00000370536 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
SOX3-201ENST00000370536 CCER1Q8TC90 406 aaPredicted RBP31.84■■■□□ 2.69
SOX3-201ENST00000370536 ARHGAP35Q9NRY4 1499 aa31.82■■■□□ 2.69
SOX3-201ENST00000370536 KIF21AQ7Z4S6 1674 aa31.71■■■□□ 2.67
SOX3-201ENST00000370536 WDR97A6NE52 1622 aa31.66■■■□□ 2.66
SOX3-201ENST00000370536 KANK4Q5T7N3 995 aaPredicted RBP31.63■■■□□ 2.65
SOX3-201ENST00000370536 HNRNPUL2Q1KMD3 747 aaKnown RBP31.63■■■□□ 2.65
SOX3-201ENST00000370536 CUL7Q14999 1698 aa31.61■■■□□ 2.65
SOX3-201ENST00000370536 TDRD9Q8NDG6 1382 aaKnown RBP31.58■■■□□ 2.65
SOX3-201ENST00000370536 ABCA5Q8WWZ7 1642 aa31.55■■■□□ 2.64
SOX3-201ENST00000370536 GAPVD1Q14C86 1478 aa31.51■■■□□ 2.63
SOX3-201ENST00000370536 TARBP1Q13395 1621 aaKnown RBP31.44■■■□□ 2.62
SOX3-201ENST00000370536 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
SOX3-201ENST00000370536 CTTNBP2Q8WZ74 1663 aa31.4■■■□□ 2.62
SOX3-201ENST00000370536 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms