Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 ZC3H11A-212ENST00000495527 8404 ntTSL 1 (best)4.74□□□□□ -1.653e-8■■□□□ 11.7
FUBP3Q96I24 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.723e-8■■□□□ 11.7
FUBP3Q96I24 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.91□□□□□ -1.942e-6■■□□□ 11.7
FUBP3Q96I24 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.994e-10■■□□□ 11.7
FUBP3Q96I24 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.162e-6■■□□□ 11.7
FUBP3Q96I24 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.753e-7■■□□□ 11.7
FUBP3Q96I24 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.844e-7■■□□□ 11.7
FUBP3Q96I24 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.392e-6■■□□□ 11.6
FUBP3Q96I24 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.65□□□□□ -1.52e-6■■□□□ 11.6
FUBP3Q96I24 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.882e-8■■□□□ 11.6
FUBP3Q96I24 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.64□□□□□ -1.032e-8■■□□□ 11.6
FUBP3Q96I24 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.22□□□□□ -1.092e-8■■□□□ 11.6
FUBP3Q96I24 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.57□□□□□ -1.22e-9■■□□□ 11.6
FUBP3Q96I24 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.665e-8■■□□□ 11.6
FUBP3Q96I24 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC9.15□□□□□ -0.955e-8■■□□□ 11.6
FUBP3Q96I24 SPTBN1-204ENST00000467371 3332 ntTSL 28.35□□□□□ -1.075e-8■■□□□ 11.6
FUBP3Q96I24 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.776e-7■■□□□ 11.6
FUBP3Q96I24 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.563e-6■■□□□ 11.6
FUBP3Q96I24 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.323e-9■■□□□ 11.6
FUBP3Q96I24 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.111e-18■■□□□ 11.6
FUBP3Q96I24 ATAD2-202ENST00000517666 4995 ntTSL 512.06□□□□□ -0.483e-7■■□□□ 11.5
FUBP3Q96I24 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.513e-7■■□□□ 11.5
FUBP3Q96I24 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.141e-6■■□□□ 11.5
FUBP3Q96I24 AL355312.2-202ENST00000628047 876 ntTSL 54.97□□□□□ -1.611e-6■■□□□ 11.5
FUBP3Q96I24 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.51■□□□□ 0.393e-12■■□□□ 11.5
FUBP3Q96I24 SLBP-204ENST00000483348 1030 ntTSL 317.26■□□□□ 0.353e-12■■□□□ 11.5
FUBP3Q96I24 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.042e-7■■□□□ 11.5
FUBP3Q96I24 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.14□□□□□ -0.472e-7■■□□□ 11.5
FUBP3Q96I24 EPAS1-206ENST00000466465 3622 ntTSL 28.59□□□□□ -1.032e-7■■□□□ 11.5
FUBP3Q96I24 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.112e-7■■□□□ 11.5
FUBP3Q96I24 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.262e-7■■□□□ 11.5
FUBP3Q96I24 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.392e-7■■□□□ 11.5
FUBP3Q96I24 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.512e-7■■□□□ 11.5
FUBP3Q96I24 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.07□□□□□ -1.62e-7■■□□□ 11.5
FUBP3Q96I24 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.062e-10■■□□□ 11.4
FUBP3Q96I24 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.542e-10■■□□□ 11.4
FUBP3Q96I24 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.422e-10■■□□□ 11.4
FUBP3Q96I24 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.61■■■□□ 2.332e-9■■□□□ 11.4
FUBP3Q96I24 GRK2-207ENST00000529738 500 ntTSL 222.51■■□□□ 1.192e-9■■□□□ 11.4
FUBP3Q96I24 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.662e-9■■□□□ 11.4
FUBP3Q96I24 GRK2-203ENST00000524899 751 ntTSL 316.89■□□□□ 0.292e-9■■□□□ 11.4
FUBP3Q96I24 GRK2-202ENST00000416281 4493 ntTSL 214.11□□□□□ -0.152e-9■■□□□ 11.4
FUBP3Q96I24 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.22e-6■■□□□ 11.4
FUBP3Q96I24 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.492e-6■■□□□ 11.4
FUBP3Q96I24 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.52e-6■■□□□ 11.4
FUBP3Q96I24 NAB1-208ENST00000434473 1661 ntTSL 29.38□□□□□ -0.912e-6■■□□□ 11.4
FUBP3Q96I24 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.196e-7■■□□□ 11.4
FUBP3Q96I24 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.11e-8■■□□□ 11.4
FUBP3Q96I24 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.071e-12■■□□□ 11.4
FUBP3Q96I24 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.235e-9■■□□□ 11.4
FUBP3Q96I24 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.25e-9■■□□□ 11.4
FUBP3Q96I24 AMFR-208ENST00000566757 1844 nt16.19■□□□□ 0.185e-9■■□□□ 11.4
FUBP3Q96I24 PPM1D-202ENST00000392995 2996 ntTSL 214.27□□□□□ -0.125e-9■■□□□ 11.4
FUBP3Q96I24 AMFR-210ENST00000568325 1230 ntTSL 214.1□□□□□ -0.155e-9■■□□□ 11.4
FUBP3Q96I24 AMFR-202ENST00000492830 2249 ntTSL 213.63□□□□□ -0.235e-9■■□□□ 11.4
FUBP3Q96I24 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.461e-12■■□□□ 11.4
FUBP3Q96I24 TOP2B-202ENST00000413971 2049 ntTSL 55.09□□□□□ -1.61e-12■■□□□ 11.4
FUBP3Q96I24 ZC3H11A-215ENST00000640465 4365 ntTSL 1 (best)3.98□□□□□ -1.775e-9■■□□□ 11.4
FUBP3Q96I24 SUB1-205ENST00000504789 570 ntTSL 420.95■□□□□ 0.941e-9■□□□□ 11.3
FUBP3Q96I24 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.451e-9■□□□□ 11.3
FUBP3Q96I24 SUB1-209ENST00000511615 1658 ntTSL 1 (best)9.57□□□□□ -0.881e-9■□□□□ 11.3
FUBP3Q96I24 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.981e-9■□□□□ 11.3
FUBP3Q96I24 SUB1-204ENST00000504016 509 ntTSL 35.47□□□□□ -1.531e-9■□□□□ 11.3
FUBP3Q96I24 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.651e-9■□□□□ 11.3
FUBP3Q96I24 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.014e-6■□□□□ 11.3
FUBP3Q96I24 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.667e-14■□□□□ 11.3
FUBP3Q96I24 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.127e-14■□□□□ 11.3
FUBP3Q96I24 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.817e-14■□□□□ 11.3
FUBP3Q96I24 UBE2E3-214ENST00000602970 572 ntTSL 312.65□□□□□ -0.387e-14■□□□□ 11.3
FUBP3Q96I24 UBE2E3-210ENST00000602762 340 ntTSL 38.38□□□□□ -1.077e-14■□□□□ 11.3
FUBP3Q96I24 UBE2E3-211ENST00000602837 814 ntTSL 37.59□□□□□ -1.197e-14■□□□□ 11.3
FUBP3Q96I24 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.242e-9■□□□□ 11.3
FUBP3Q96I24 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.733e-11■□□□□ 11.3
FUBP3Q96I24 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.33□□□□□ -1.243e-11■□□□□ 11.3
FUBP3Q96I24 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.63■□□□□ 0.891e-20■□□□□ 11.3
FUBP3Q96I24 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.141e-20■□□□□ 11.3
FUBP3Q96I24 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.569e-6■□□□□ 11.2
FUBP3Q96I24 KLHDC2-207ENST00000555443 1756 ntTSL 221.36■■□□□ 1.019e-6■□□□□ 11.2
FUBP3Q96I24 KLHDC2-208ENST00000555739 1696 ntTSL 521.03■□□□□ 0.969e-6■□□□□ 11.2
FUBP3Q96I24 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.739e-6■□□□□ 11.2
FUBP3Q96I24 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.719e-6■□□□□ 11.2
FUBP3Q96I24 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.669e-6■□□□□ 11.2
FUBP3Q96I24 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.38■□□□□ 0.379e-6■□□□□ 11.2
FUBP3Q96I24 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.5■□□□□ 0.239e-6■□□□□ 11.2
FUBP3Q96I24 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.139e-6■□□□□ 11.2
FUBP3Q96I24 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.85■□□□□ 0.139e-6■□□□□ 11.2
FUBP3Q96I24 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.64□□□□□ -0.079e-6■□□□□ 11.2
FUBP3Q96I24 WRB-214ENST00000623703 1392 ntTSL 214.3□□□□□ -0.129e-6■□□□□ 11.2
FUBP3Q96I24 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.179e-6■□□□□ 11.2
FUBP3Q96I24 YTHDF3-208ENST00000615676 5092 ntTSL 1 (best)13.49□□□□□ -0.259e-6■□□□□ 11.2
FUBP3Q96I24 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.44□□□□□ -0.269e-6■□□□□ 11.2
FUBP3Q96I24 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC13.3□□□□□ -0.289e-6■□□□□ 11.2
FUBP3Q96I24 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC12.92□□□□□ -0.349e-6■□□□□ 11.2
FUBP3Q96I24 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.49e-6■□□□□ 11.2
FUBP3Q96I24 CHMP1B-201ENST00000526991 3054 ntAPPRIS P1 BASIC11.87□□□□□ -0.519e-6■□□□□ 11.2
FUBP3Q96I24 WRB-213ENST00000490860 624 ntTSL 211.48□□□□□ -0.579e-6■□□□□ 11.2
FUBP3Q96I24 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.589e-6■□□□□ 11.2
FUBP3Q96I24 WRB-207ENST00000466787 1416 ntTSL 1 (best)10.96□□□□□ -0.659e-6■□□□□ 11.2
FUBP3Q96I24 GNAL-206ENST00000585642 623 ntTSL 49.85□□□□□ -0.839e-6■□□□□ 11.2
FUBP3Q96I24 RALGAPA2-204ENST00000430436 8769 ntTSL 58.51□□□□□ -1.059e-6■□□□□ 11.2
Retrieved 100 of 4,568 protein–RNA pairs in 419 ms