RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
SPTBN1-202ENST00000356805 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
SPTBN1-202ENST00000356805 MYT1Q01538 1121 aa18.48■□□□□ 0.55
SPTBN1-202ENST00000356805 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
SPTBN1-202ENST00000356805 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
SPTBN1-202ENST00000356805 ERICH6Q7L0X2 663 aa17.96■□□□□ 0.47
SPTBN1-202ENST00000356805 APLP2Q06481 763 aa17.9■□□□□ 0.46
SPTBN1-202ENST00000356805 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
SPTBN1-202ENST00000356805 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
SPTBN1-202ENST00000356805 TTBK1Q5TCY1 1321 aaPredicted RBP17.77■□□□□ 0.44
SPTBN1-202ENST00000356805 CCER1Q8TC90 406 aaPredicted RBP17.74■□□□□ 0.43
SPTBN1-202ENST00000356805 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
SPTBN1-202ENST00000356805 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
SPTBN1-202ENST00000356805 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
SPTBN1-202ENST00000356805 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
SPTBN1-202ENST00000356805 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
SPTBN1-202ENST00000356805 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
SPTBN1-202ENST00000356805 NEFLP07196 543 aa17.27■□□□□ 0.36
SPTBN1-202ENST00000356805 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
SPTBN1-202ENST00000356805 DAXXQ9UER7 740 aaPredicted RBP17.1■□□□□ 0.33
SPTBN1-202ENST00000356805 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
SPTBN1-202ENST00000356805 POLR3GLQ9BT43 218 aa16.91■□□□□ 0.3
SPTBN1-202ENST00000356805 MYT1LQ9UL68 1186 aa16.91■□□□□ 0.3
SPTBN1-202ENST00000356805 HRCP23327 699 aa16.9■□□□□ 0.3
SPTBN1-202ENST00000356805 TRIM41Q8WV44 630 aa16.83■□□□□ 0.29
SPTBN1-202ENST00000356805 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
SPTBN1-202ENST00000356805 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
SPTBN1-202ENST00000356805 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.27
SPTBN1-202ENST00000356805 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
SPTBN1-202ENST00000356805 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
SPTBN1-202ENST00000356805 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
SPTBN1-202ENST00000356805 ITGAEP38570 1179 aa16.64■□□□□ 0.25
SPTBN1-202ENST00000356805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
SPTBN1-202ENST00000356805 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
SPTBN1-202ENST00000356805 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
SPTBN1-202ENST00000356805 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
SPTBN1-202ENST00000356805 BCL11AQ9H165 835 aa16.33■□□□□ 0.2
SPTBN1-202ENST00000356805 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
SPTBN1-202ENST00000356805 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
SPTBN1-202ENST00000356805 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
SPTBN1-202ENST00000356805 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
SPTBN1-202ENST00000356805 BCANQ96GW7 911 aa16.12■□□□□ 0.17
SPTBN1-202ENST00000356805 GLIPR1L2Q4G1C9 344 aa16.11■□□□□ 0.17
SPTBN1-202ENST00000356805 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
SPTBN1-202ENST00000356805 CANXP27824 592 aaKnown RBP16.07■□□□□ 0.16
SPTBN1-202ENST00000356805 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
SPTBN1-202ENST00000356805 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
SPTBN1-202ENST00000356805 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
SPTBN1-202ENST00000356805 NEUROD1Q13562 356 aa16.02■□□□□ 0.16
SPTBN1-202ENST00000356805 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
SPTBN1-202ENST00000356805 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
SPTBN1-202ENST00000356805 ANP32AP39687 249 aaKnown RBP15.91■□□□□ 0.14
SPTBN1-202ENST00000356805 NEFMP07197 916 aa15.9■□□□□ 0.14
SPTBN1-202ENST00000356805 ANP32CO43423 234 aa15.88■□□□□ 0.13
SPTBN1-202ENST00000356805 EIF5BO60841 1220 aaKnown RBP15.85■□□□□ 0.13
SPTBN1-202ENST00000356805 NPM2Q86SE8 214 aaKnown RBP15.85■□□□□ 0.13
SPTBN1-202ENST00000356805 ANP32BQ92688 251 aaKnown RBP15.83■□□□□ 0.12
SPTBN1-202ENST00000356805 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
SPTBN1-202ENST00000356805 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
SPTBN1-202ENST00000356805 FBLN2P98095 1184 aa15.7■□□□□ 0.1
SPTBN1-202ENST00000356805 ARXQ96QS3 562 aa15.64■□□□□ 0.09
SPTBN1-202ENST00000356805 CDK11BP21127 795 aaKnown RBP15.59■□□□□ 0.09
SPTBN1-202ENST00000356805 UPF2Q9HAU5 1272 aaKnown RBP15.59■□□□□ 0.09
SPTBN1-202ENST00000356805 ARID3CA6NKF2 412 aa15.58■□□□□ 0.09
SPTBN1-202ENST00000356805 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.08
SPTBN1-202ENST00000356805 ESF1Q9H501 851 aaKnown RBP15.54■□□□□ 0.08
SPTBN1-202ENST00000356805 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
SPTBN1-202ENST00000356805 A0A0G2JS52 829 aa15.51■□□□□ 0.07
SPTBN1-202ENST00000356805 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
SPTBN1-202ENST00000356805 NBR1Q14596 966 aa15.5■□□□□ 0.07
SPTBN1-202ENST00000356805 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
SPTBN1-202ENST00000356805 CHGAP10645 457 aaKnown RBP15.48■□□□□ 0.07
SPTBN1-202ENST00000356805 SALL2Q9Y467 1007 aaPredicted RBP15.48■□□□□ 0.07
SPTBN1-202ENST00000356805 ANP32EQ9BTT0 268 aa15.48■□□□□ 0.07
SPTBN1-202ENST00000356805 FKBP8Q14318 412 aa15.46■□□□□ 0.06
SPTBN1-202ENST00000356805 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
SPTBN1-202ENST00000356805 TULP1O00294 542 aaPredicted RBP15.42■□□□□ 0.06
SPTBN1-202ENST00000356805 TNNT2P45379 298 aaPredicted RBP15.4■□□□□ 0.06
SPTBN1-202ENST00000356805 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
SPTBN1-202ENST00000356805 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
SPTBN1-202ENST00000356805 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
SPTBN1-202ENST00000356805 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPTBN1-202ENST00000356805 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
SPTBN1-202ENST00000356805 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPTBN1-202ENST00000356805 DDRGK1Q96HY6 314 aa15.32■□□□□ 0.04
SPTBN1-202ENST00000356805 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
SPTBN1-202ENST00000356805 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
SPTBN1-202ENST00000356805 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
SPTBN1-202ENST00000356805 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
SPTBN1-202ENST00000356805 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
SPTBN1-202ENST00000356805 WDR43Q15061 677 aaKnown RBP eCLIP15.25■□□□□ 0.036e-7■□□□□ 10
SPTBN1-202ENST00000356805 PPM1GO15355 546 aaPredicted RBP15.23■□□□□ 0.03
SPTBN1-202ENST00000356805 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
SPTBN1-202ENST00000356805 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
SPTBN1-202ENST00000356805 TRIM44Q96DX7 344 aaPredicted RBP15.22■□□□□ 0.03
SPTBN1-202ENST00000356805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.032e-8■■□□□ 13.9
SPTBN1-202ENST00000356805 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
SPTBN1-202ENST00000356805 NCLP19338 710 aaKnown RBP15.22■□□□□ 0.03
SPTBN1-202ENST00000356805 BECN1Q14457 450 aa15.22■□□□□ 0.03
SPTBN1-202ENST00000356805 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms