RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
TMCC1-201ENST00000393238 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
TMCC1-201ENST00000393238 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
TMCC1-201ENST00000393238 FAM9AQ8IZU1 332 aaPredicted RBP15.37■□□□□ 0.05
TMCC1-201ENST00000393238 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
TMCC1-201ENST00000393238 APLP2Q06481 763 aa14.98□□□□□ -0.01
TMCC1-201ENST00000393238 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
TMCC1-201ENST00000393238 ABCC9O60706 1549 aa14.52□□□□□ -0.08
TMCC1-201ENST00000393238 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
TMCC1-201ENST00000393238 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
TMCC1-201ENST00000393238 RANGAP1P46060 587 aaPredicted RBP14.38□□□□□ -0.11
TMCC1-201ENST00000393238 UBTFP17480 764 aaKnown RBP14.37□□□□□ -0.11
TMCC1-201ENST00000393238 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.134e-7■□□□□ 10.5
TMCC1-201ENST00000393238 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
TMCC1-201ENST00000393238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
TMCC1-201ENST00000393238 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
TMCC1-201ENST00000393238 TTBK1Q5TCY1 1321 aaPredicted RBP14.14□□□□□ -0.15
TMCC1-201ENST00000393238 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
TMCC1-201ENST00000393238 FBLN2P98095 1184 aa13.89□□□□□ -0.19
TMCC1-201ENST00000393238 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
TMCC1-201ENST00000393238 ZEB1P37275 1124 aaPredicted RBP13.87□□□□□ -0.19
TMCC1-201ENST00000393238 CCER1Q8TC90 406 aaPredicted RBP13.85□□□□□ -0.19
TMCC1-201ENST00000393238 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
TMCC1-201ENST00000393238 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
TMCC1-201ENST00000393238 SCRIBQ14160 1630 aa13.74□□□□□ -0.21
TMCC1-201ENST00000393238 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMCC1-201ENST00000393238 ITGAEP38570 1179 aa13.67□□□□□ -0.22
TMCC1-201ENST00000393238 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
TMCC1-201ENST00000393238 CDK11AQ9UQ88 783 aaPredicted RBP13.61□□□□□ -0.23
TMCC1-201ENST00000393238 ESF1Q9H501 851 aaKnown RBP13.59□□□□□ -0.23
TMCC1-201ENST00000393238 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
TMCC1-201ENST00000393238 NACADO15069 1562 aa13.57□□□□□ -0.24
TMCC1-201ENST00000393238 FAM50AQ14320 339 aaKnown RBP13.53□□□□□ -0.24
TMCC1-201ENST00000393238 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
TMCC1-201ENST00000393238 CENPBP07199 599 aaPredicted RBP13.51□□□□□ -0.25
TMCC1-201ENST00000393238 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
TMCC1-201ENST00000393238 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
TMCC1-201ENST00000393238 TRIM52Q96A61 297 aa13.49□□□□□ -0.25
TMCC1-201ENST00000393238 TRIM26Q12899 539 aaPredicted RBP13.48□□□□□ -0.25
TMCC1-201ENST00000393238 NEFLP07196 543 aa13.46□□□□□ -0.25
TMCC1-201ENST00000393238 BCANQ96GW7 911 aa13.45□□□□□ -0.26
TMCC1-201ENST00000393238 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
TMCC1-201ENST00000393238 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
TMCC1-201ENST00000393238 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
TMCC1-201ENST00000393238 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
TMCC1-201ENST00000393238 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
TMCC1-201ENST00000393238 ZNF777Q9ULD5 760 aaPredicted RBP13.33□□□□□ -0.28
TMCC1-201ENST00000393238 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
TMCC1-201ENST00000393238 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
TMCC1-201ENST00000393238 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
TMCC1-201ENST00000393238 ERICH6Q7L0X2 663 aa13.28□□□□□ -0.28
TMCC1-201ENST00000393238 MYT1Q01538 1121 aa13.25□□□□□ -0.29
TMCC1-201ENST00000393238 NEFMP07197 916 aa13.21□□□□□ -0.29
TMCC1-201ENST00000393238 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
TMCC1-201ENST00000393238 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
TMCC1-201ENST00000393238 TSPY4P0CV99 314 aa13.15□□□□□ -0.3
TMCC1-201ENST00000393238 TSPY10P0CW01 314 aa13.15□□□□□ -0.3
TMCC1-201ENST00000393238 DCAF1Q9Y4B6 1507 aa13.14□□□□□ -0.31
TMCC1-201ENST00000393238 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
TMCC1-201ENST00000393238 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
TMCC1-201ENST00000393238 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
TMCC1-201ENST00000393238 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
TMCC1-201ENST00000393238 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
TMCC1-201ENST00000393238 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.32
TMCC1-201ENST00000393238 DAXXQ9UER7 740 aaPredicted RBP13.08□□□□□ -0.32
TMCC1-201ENST00000393238 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
TMCC1-201ENST00000393238 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
TMCC1-201ENST00000393238 ARID4BQ4LE39 1312 aaPredicted RBP13.05□□□□□ -0.32
TMCC1-201ENST00000393238 MTUS2Q5JR59 1369 aa13.05□□□□□ -0.32
TMCC1-201ENST00000393238 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
TMCC1-201ENST00000393238 EEA1Q15075 1411 aa13.04□□□□□ -0.32
TMCC1-201ENST00000393238 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
TMCC1-201ENST00000393238 SLC24A1O60721 1099 aa13.03□□□□□ -0.32
TMCC1-201ENST00000393238 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
TMCC1-201ENST00000393238 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
TMCC1-201ENST00000393238 KIF27Q86VH2 1401 aa13.03□□□□□ -0.32
TMCC1-201ENST00000393238 SMARCA2P51531 1590 aa13□□□□□ -0.33
TMCC1-201ENST00000393238 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
TMCC1-201ENST00000393238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.333e-13■□□□□ 10.2
TMCC1-201ENST00000393238 PPP1R15AO75807 674 aaPredicted RBP12.98□□□□□ -0.33
TMCC1-201ENST00000393238 ANP32CO43423 234 aa12.93□□□□□ -0.34
TMCC1-201ENST00000393238 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
TMCC1-201ENST00000393238 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
TMCC1-201ENST00000393238 CLSPNQ9HAW4 1339 aa12.92□□□□□ -0.34
TMCC1-201ENST00000393238 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
TMCC1-201ENST00000393238 HRCP23327 699 aa12.91□□□□□ -0.34
TMCC1-201ENST00000393238 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
TMCC1-201ENST00000393238 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
TMCC1-201ENST00000393238 CLIP1P30622 1438 aa12.86□□□□□ -0.35
TMCC1-201ENST00000393238 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
TMCC1-201ENST00000393238 GOLGA3Q08378 1498 aa12.86□□□□□ -0.35
TMCC1-201ENST00000393238 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
TMCC1-201ENST00000393238 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
TMCC1-201ENST00000393238 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
TMCC1-201ENST00000393238 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
TMCC1-201ENST00000393238 CEP164Q9UPV0 1460 aa12.84□□□□□ -0.35
TMCC1-201ENST00000393238 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
TMCC1-201ENST00000393238 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
TMCC1-201ENST00000393238 CUX2O14529 1486 aa12.78□□□□□ -0.36
TMCC1-201ENST00000393238 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms